Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0922 Trochodendron aralioides HOM05D001890 ORTHO05D008163 8.6e-151 537.0 270 100.0
Nn2g14391 Nelumbo nucifera HOM05D001890 ORTHO05D008163 3.7e-101 372.1 270 68.5
Aqoxy1G01947 Aquilegia oxysepala HOM05D001890 ORTHO05D008163 7.9e-88 327.8 270 64.4
PSO407G0155 Papaver somniferum HOM05D001890 ORTHO05D008163 1.3e-85 320.5 271 62.4
PSO170G4460 Papaver somniferum HOM05D001890 ORTHO05D008163 2.8e-85 319.3 270 62.2
Dinv11885 Davidia involucrata HOM05D001890 ORTHO05D008163 9.0e-84 314.3 262 65.3
Actinidia03864 Actinidia chinensis HOM05D001890 ORTHO05D008163 7.7e-83 311.2 231 68.4
Actinidia03972 Actinidia chinensis HOM05D001890 ORTHO05D008163 3.8e-82 308.9 272 62.9
MBI05_g37895_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D008163 1.4e-81 307.0 266 63.2
Haze_20108 Corylus avellana HOM05D001890 ORTHO05D008163 7.9e-80 301.2 274 60.2
Thecc.05G108500 Theobroma cacao HOM05D001890 ORTHO05D008163 7.9e-80 301.2 279 59.1
GSVIVG01022555001 Vitis vinifera HOM05D001890 ORTHO05D008163 2.3e-79 299.7 272 59.9
CiPaw.09G022900 Carya illinoinensis HOM05D001890 ORTHO05D008163 2.2e-77 293.1 275 58.5
QL07p026864 Quercus lobata HOM05D001890 ORTHO05D008163 3.7e-77 292.4 214 68.2
Gorai.002G233900 Gossypium raimondii HOM05D001890 ORTHO05D008163 1.4e-76 290.4 262 61.1
Eucgr.A02558 Eucalyptus grandis HOM05D001890 ORTHO05D008163 1.8e-76 290.0 216 68.5
Gohir.A01G200100 Gossypium hirsutum HOM05D001890 ORTHO05D008163 1.8e-76 290.0 243 63.8
MELO3C009561.2 Cucumis melo HOM05D001890 ORTHO05D008163 2.4e-76 289.7 279 59.9
CsaV3_3G038180 Cucumis sativus L. HOM05D001890 ORTHO05D008163 6.9e-76 288.1 276 59.8
Sed0014416 Sechium edule HOM05D001890 ORTHO05D008163 1.5e-75 287.0 227 66.5
Atru.chr8.1300 Acer truncatum HOM05D001890 ORTHO05D008163 2.0e-75 286.6 268 56.7
Gohir.D01G190200 Gossypium hirsutum HOM05D001890 ORTHO05D008163 2.6e-75 286.2 262 60.7
Manes.08G036100 Manihot esculenta HOM05D001890 ORTHO05D008163 1.3e-74 283.9 259 56.4
COL.COLO4_29517 Corchorus olitorius HOM05D001890 ORTHO05D008163 2.9e-74 282.7 274 58.0
Ciclev10012448m.g Citrus clementina HOM05D001890 ORTHO05D008163 2.5e-73 279.6 211 65.9
TWI74G0853 Tripterygium wilfordii HOM05D001890 ORTHO05D008163 2.5e-73 279.6 269 56.1
FAN09G2968 Fragaria x ananassa HOM05D001890 ORTHO05D008163 5.5e-73 278.5 203 67.5
Oeu045017.1 Olea europaea HOM05D001890 ORTHO05D008163 7.2e-73 278.1 203 67.0
Rhsim03G0062200 Rhododendron simsii HOM05D001890 ORTHO05D008163 9.4e-73 277.7 226 64.2
Cc06_g06850 Coffea canephora HOM05D001890 ORTHO05D008163 1.6e-72 276.9 239 61.5
Lalb_Chr06g0173221 Lupinus albus HOM05D001890 ORTHO05D008163 1.6e-72 276.9 278 55.4
Nitab4.5_0009788g0030 Nicotiana tabacum HOM05D001890 ORTHO05D008163 2.1e-72 276.6 211 67.3
Nitab4.5_0005218g0010 Nicotiana tabacum HOM05D001890 ORTHO05D008163 3.6e-72 275.8 256 58.2
MD12G1044000 Malus domestica HOM05D001890 ORTHO05D008163 4.7e-72 275.4 274 54.0
Solyc01g006860.3 Solanum lycopersicum HOM05D001890 ORTHO05D008163 6.1e-72 275.0 212 65.1
Prupe.7G091100 Prunus persica HOM05D001890 ORTHO05D008163 7.9e-72 274.6 273 55.7
Glyma.02G193000 Glycine max HOM05D001890 ORTHO05D008163 1.0e-71 274.2 276 54.0
arahy.Tifrunner.gnm1.ann1.59XBIZ Arachis hypogaea HOM05D001890 ORTHO05D008163 1.4e-71 273.9 212 62.3
FAN14G3769 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.8e-71 273.5 203 65.5
CARHR207150 Cardamine hirsuta HOM05D001890 ORTHO05D008163 2.3e-71 273.1 218 62.4
FAN05G2088 Fragaria x ananassa HOM05D001890 ORTHO05D008163 2.3e-71 273.1 203 65.0
RcHm_v2.0_Chr3g0476781 Rosa chinensis HOM05D001890 ORTHO05D008163 2.3e-71 273.1 277 54.2
Sopen01g002850 Solanum pennellii HOM05D001890 ORTHO05D008163 2.3e-71 273.1 212 64.6
Hma1.2p1_2851F.1_g329460 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 3.9e-71 272.3 178 73.0
Lj5g0002159 Lotus japonicus HOM05D001890 ORTHO05D008163 3.9e-71 272.3 212 62.7
MD14G1043000 Malus domestica HOM05D001890 ORTHO05D008163 5.1e-71 271.9 271 55.0
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 5.1e-71 271.9 264 55.7
THA.LOC104816627 Tarenaya hassleriana HOM05D001890 ORTHO05D008163 1.1e-70 270.8 271 51.7
CANSAT64G1416 Cannabis sativa HOM05D001890 ORTHO05D008163 1.5e-70 270.4 266 56.8
Glyma.10G083800 Glycine max HOM05D001890 ORTHO05D008163 1.5e-70 270.4 275 55.3
PGSC0003DMG400021337 Solanum tuberosum HOM05D001890 ORTHO05D008163 1.5e-70 270.4 212 64.2
FvH4_6g20780 Fragaria vesca HOM05D001890 ORTHO05D008163 2.0e-70 270.0 204 65.2
DCAR_013451 Daucus carota HOM05D001890 ORTHO05D008163 4.4e-70 268.9 254 57.9
Sabra06G0154600 Salix brachista HOM05D001890 ORTHO05D008163 7.4e-70 268.1 277 53.8
AL6G16500 Arabidopsis lyrata HOM05D001890 ORTHO05D008163 3.7e-69 265.8 211 64.0
arahy.Tifrunner.gnm1.ann1.XW59SW Arachis hypogaea HOM05D001890 ORTHO05D008163 3.7e-69 265.8 214 62.1
MSTRG.19331 Avicennia marina HOM05D001890 ORTHO05D008163 3.7e-69 265.8 203 64.5
Phvul.007G266300 Phaseolus vulgaris HOM05D001890 ORTHO05D008163 3.7e-69 265.8 271 53.9
Potri.006G200900 Populus trichocarpa HOM05D001890 ORTHO05D008163 3.7e-69 265.8 278 54.7
VMungo0251G0199 Vigna mungo HOM05D001890 ORTHO05D008163 4.8e-69 265.4 271 53.1
Aa31LG5G17190 Aethionema arabicum HOM05D001890 ORTHO05D008163 6.3e-69 265.0 204 60.3
Lsat_1_v5_gn_6_34681 Lactuca sativa HOM05D001890 ORTHO05D008163 6.3e-69 265.0 213 61.0
AT5G06410 Arabidopsis thaliana HOM05D001890 ORTHO05D008163 1.8e-68 263.5 209 64.1
Medtr1g055300 Medicago truncatula HOM05D001890 ORTHO05D008163 4.1e-68 262.3 200 64.0
SHI39226 Sapria himalayana HOM05D001890 ORTHO05D008163 7.0e-68 261.5 252 52.0
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 9.1e-68 261.2 211 60.7
HPP92_018252 Vanilla planifolia HOM05D001890 ORTHO05D008163 9.1e-68 261.2 278 54.3
ATR0697G265 Amborella trichopoda HOM05D001890 ORTHO05D008163 1.2e-67 260.8 202 63.9
ECA233G0010 Erigeron canadensis HOM05D001890 ORTHO05D008163 1.2e-67 260.8 279 53.0
Thhalv10014422m.g Eutrema salsugineum HOM05D001890 ORTHO05D008163 1.5e-67 260.4 273 52.4
SGA_v2.0_scaffold18G08441 Striga asiatica HOM05D001890 ORTHO05D008163 2.0e-67 260.0 204 62.3
HanXRQChr02g0053101 Helianthus annuus HOM05D001890 ORTHO05D008163 3.5e-67 259.2 206 63.1
Migut.J00743 Erythranthe guttata HOM05D001890 ORTHO05D008163 4.5e-67 258.8 263 54.4
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 1.0e-66 257.7 210 60.5
Oeu020166.1 Olea europaea HOM05D001890 ORTHO05D008163 1.0e-66 257.7 204 61.8
EL10Ac5g11823 Beta vulgaris HOM05D001890 ORTHO05D008163 1.7e-66 256.9 204 61.8
BraA10t45037Z Brassica rapa HOM05D001890 ORTHO05D008163 1.7e-66 256.9 268 50.7
A03p02720 Brassica napus HOM05D001890 ORTHO05D008163 3.8e-66 255.8 211 59.7
BolC9t59784H Brassica oleracea HOM05D001890 ORTHO05D008163 6.5e-66 255.0 210 59.0
BraA03t09635Z Brassica rapa HOM05D001890 ORTHO05D008163 8.5e-66 254.6 210 59.0
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 1.9e-65 253.4 210 59.5
ClCG10G018120 Citrullus lanatus HOM05D001890 ORTHO05D008163 2.5e-65 253.1 277 55.6
CAN.G911.27 Capsicum annuum HOM05D001890 ORTHO05D008163 4.2e-65 252.3 225 59.6
vmacro07500 Vaccinium macrocarpon HOM05D001890 ORTHO05D008163 4.7e-64 248.8 260 53.5
Zm00001eb161520 Zea mays HOM05D001890 ORTHO05D008163 4.7e-64 248.8 192 66.7
Ah.12g054380 Amaranthus hybridus HOM05D001890 ORTHO05D008163 6.7e-63 245.0 198 62.6
SGA_v2.0_scaffold116G32259 Striga asiatica HOM05D001890 ORTHO05D008163 9.7e-62 241.1 230 54.3
unitig_578.g15805 Utricularia gibba HOM05D001890 ORTHO05D008163 2.4e-60 236.5 269 49.4
SEGI_25149 Sequoiadendron giganteum HOM05D001890 ORTHO05D008163 7.7e-59 231.5 191 58.1
PGR004G2365 Punica granatum HOM05D001890 ORTHO05D008163 1.0e-58 231.1 272 48.9
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 8.5e-58 228.0 162 69.8
Os12g0456200 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D008163 4.2e-57 225.7 167 68.3
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 3.6e-56 222.6 144 77.1
CSS0004156 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D008163 1.8e-55 220.3 154 71.4
CDE06G1636 Ceratophyllum demersum HOM05D001890 ORTHO05D000511 1.8e-55 220.3 214 55.6
Psat6g128200 Pisum sativum HOM05D001890 ORTHO05D008163 2.6e-54 216.5 292 44.9
RcHm_v2.0_Chr3g0476751 Rosa chinensis HOM05D001890 ORTHO05D008163 9.8e-54 214.5 278 46.8
Sc22g0003100 Simmondsia chinensis HOM05D001890 ORTHO05D008163 1.8e-52 210.3 153 68.6
Actinidia37766 Actinidia chinensis HOM05D001890 ORTHO05D008163 4.5e-51 205.7 185 60.0
FAN05G2830 Fragaria x ananassa HOM05D001890 ORTHO05D008163 2.5e-49 199.9 143 67.8
Hund10835 Selenicereus undatus HOM05D001890 ORTHO05D008163 3.2e-49 199.5 177 58.2
AUR62036336 Chenopodium quinoa HOM05D001890 ORTHO05D008163 1.6e-48 197.2 154 61.7
Lj3C241T9 Lonicera japonica HOM05D001890 ORTHO05D008163 3.6e-48 196.1 163 61.3
Sp6g36440 Schrenkiella parvula HOM05D001890 ORTHO05D008163 3.4e-46 189.5 205 50.7
Psat2g142840 Pisum sativum HOM05D001890 ORTHO05D008163 4.9e-45 185.7 139 61.9
Cpa.g.sc104.2 Carica papaya HOM05D001890 ORTHO05D008163 6.3e-45 185.3 167 58.1
AagrBONN_evm.TU.Sc2ySwM_117.1093 Anthoceros agrestis HOM05D001890 ORTHO05D008163 3.1e-44 183.0 190 47.9
Pp3c16_9340 Physcomitrium patens HOM05D001890 ORTHO05D008163 2.8e-40 169.9 269 37.9
Hma1.2p1_2851F.1_g329450 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 6.8e-39 165.2 154 57.1
AUR62030695 Chenopodium quinoa HOM05D001890 ORTHO05D008163 1.1e-36 157.9 114 65.8
Mapoly0055s0040 Marchantia polymorpha HOM05D001890 ORTHO05D008163 2.3e-34 150.2 191 43.5
CBR_g70174 Chara braunii HOM05D001890 ORTHO05D008163 4.7e-32 142.5 198 41.4
Lj1g0015991 Lotus japonicus HOM05D001890 ORTHO05D008163 2.0e-22 110.5 81 69.1
Cre11.g467718 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 2.6e-22 110.2 179 37.4
Cre12.g507559 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 2.6e-22 110.2 179 37.4
Psat1g223560 Pisum sativum HOM05D001890 ORTHO05D008163 5.8e-22 109.0 119 47.1
Peaxi162Scf00675g00610 Petunia axillaris HOM05D001890 ORTHO05D008163 1.3e-21 107.8 112 52.7
Peaxi162Scf00675g00611 Petunia axillaris HOM05D001890 ORTHO05D008163 3.7e-21 106.3 100 58.0
SMO353G0218 Selaginella moellendorffii HOM05D001890 ORTHO05D008163 2.1e-19 100.5 123 39.8
MCO10G285 Micromonas commoda HOM05D001890 ORTHO05D008163 1.2e-16 91.3 222 29.3
CBR_g31284 Chara braunii HOM05D001890 ORTHO05D008163 1.4e-15 87.8 143 37.1
Lalb_Chr25g0282121 Lupinus albus HOM05D001890 ORTHO05D008163 1.5e-14 84.3 104 45.2
Peaxi162Scf00767g00522 Petunia axillaris HOM05D001890 ORTHO05D008163 7.3e-09 65.5 204 29.4
Lj3C241T8 Lonicera japonica HOM05D001890 ORTHO05D008163 1.2e-08 64.7 84 44.0


User provided reference genes

Program Settings