Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0905 Trochodendron aralioides HOM05D008447 ORTHO05D010638 3.0e-290 1001.1 508 100.0
Dinv18105 Davidia involucrata HOM05D008447 ORTHO05D010638 4.5e-217 758.1 508 74.8
Nn7g36103 Nelumbo nucifera HOM05D008447 ORTHO05D010638 2.5e-212 742.3 511 74.0
Cfa016881 Carpinus fangiana HOM05D008447 ORTHO05D010638 1.0e-205 720.3 502 73.3
Aqoxy1G00302 Aquilegia oxysepala HOM05D008447 ORTHO05D010638 1.1e-204 716.8 509 71.9
GSVIVG01033352001 Vitis vinifera HOM05D008447 ORTHO05D010638 7.4e-204 714.1 465 76.8
Ciclev10004787m.g Citrus clementina HOM05D008447 ORTHO05D010638 1.0e-200 703.7 504 70.8
Prupe.7G070400 Prunus persica HOM05D008447 ORTHO05D010638 1.3e-200 703.4 501 72.3
Atru.chr1.942 Acer truncatum HOM05D008447 ORTHO05D010638 7.9e-198 694.1 511 69.1
COL.COLO4_28736 Corchorus olitorius HOM05D008447 ORTHO05D010638 3.0e-197 692.2 510 70.8
Thecc.05G165700 Theobroma cacao HOM05D008447 ORTHO05D010638 4.3e-196 688.3 510 70.2
MD12G1063100 Malus domestica HOM05D008447 ORTHO05D010638 8.2e-195 684.1 482 71.8
PSO384G3680 Papaver somniferum HOM05D008447 ORTHO05D010638 9.0e-194 680.6 480 70.8
Rhsim04G0099000 Rhododendron simsii HOM05D008447 ORTHO05D010638 4.6e-190 668.3 576 61.6
Migut.J01799 Erythranthe guttata HOM05D008447 ORTHO05D010638 9.7e-188 660.6 460 70.7
Gorai.002G037200 Gossypium raimondii HOM05D008447 ORTHO05D010638 3.8e-184 648.7 504 66.7
CANSAT80G2072 Cannabis sativa HOM05D008447 ORTHO05D010638 1.4e-183 646.7 496 66.5
CANSAT80G0811 Cannabis sativa HOM05D008447 ORTHO05D010638 2.5e-183 646.0 496 66.5
Haze_19941 Corylus avellana HOM05D008447 ORTHO05D010638 3.0e-181 639.0 499 67.9
PGR004G0530 Punica granatum HOM05D008447 ORTHO05D010638 5.0e-176 621.7 480 65.8
PGSC0003DMG400028389 Solanum tuberosum HOM05D008447 ORTHO05D010638 2.1e-174 616.3 493 62.3
Sopen05g007620 Solanum pennellii HOM05D008447 ORTHO05D010638 1.1e-172 610.5 493 62.1
HPP92_023777 Vanilla planifolia HOM05D008447 ORTHO05D010638 9.7e-172 607.4 481 64.0
Solyc05g012800.1 Solanum lycopersicum HOM05D008447 ORTHO05D010638 2.0e-169 599.7 494 60.7
Gohir.D01G027950 Gossypium hirsutum HOM05D008447 ORTHO05D010638 7.5e-156 554.7 476 62.6
Peaxi162Scf00285g00227 Petunia axillaris HOM05D008447 ORTHO05D010638 4.8e-155 552.0 479 60.1
Cpa.g.sc85.118 Carica papaya HOM05D008447 ORTHO05D010638 7.0e-154 548.1 491 60.5
Nitab4.5_0008022g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 2.1e-150 536.6 518 55.4
Nitab4.5_0000016g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 4.7e-142 508.8 518 52.9
Gohir.D01G027900 Gossypium hirsutum HOM05D008447 ORTHO05D010638 9.8e-140 501.1 371 69.3
Gohir.A01G040200 Gossypium hirsutum HOM05D008447 ORTHO05D010638 7.8e-137 491.5 395 65.1
Mapoly0099s0027 Marchantia polymorpha HOM05D008447 ORTHO05D010638 2.0e-132 476.9 475 51.8
SMO367G0387 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 3.4e-132 476.1 470 52.1
SMO275G0044 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 1.3e-131 474.2 470 51.7
MBI01_g36431_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 5.6e-127 458.8 382 65.4
Pp3c10_15450 Physcomitrium patens HOM05D008447 ORTHO05D010638 7.3e-127 458.4 473 50.5
CSS0040904 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 9.9e-124 448.0 406 59.9
Actinidia17252 Actinidia chinensis HOM05D008447 ORTHO05D010638 8.4e-115 418.3 330 65.2
AagrBONN_evm.TU.Sc2ySwM_228.434 Anthoceros agrestis HOM05D008447 ORTHO05D010638 8.7e-112 408.3 443 48.8
Hma1.2p1_0856F.1_g229060 Hydrangea macrophylla HOM05D008447 ORTHO05D010638 2.4e-109 400.2 296 68.9
PRCOL_00000676 Prasinoderma coloniale HOM05D008447 ORTHO05D010638 6.3e-78 295.8 511 38.0
QL07p022609 Quercus lobata HOM05D008447 ORTHO05D010638 2.5e-66 257.3 182 68.1
QL07p022618 Quercus lobata HOM05D008447 ORTHO05D010638 4.5e-60 236.5 670 30.1
RcHm_v2.0_Chr3g0480711 Rosa chinensis HOM05D008447 ORTHO05D010638 1.7e-54 218.0 158 67.7
CBR_g675 Chara braunii HOM05D008447 ORTHO05D010638 4.0e-48 196.8 227 43.6
RcHm_v2.0_Chr3g0480721 Rosa chinensis HOM05D008447 ORTHO05D010638 6.6e-35 152.9 156 60.9
Actinidia17253 Actinidia chinensis HOM05D008447 ORTHO05D010638 1.4e-32 145.2 95 73.7
Haze_19939 Corylus avellana HOM05D008447 ORTHO05D010638 1.0e-24 119.0 76 72.4
CSS0021541 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 7.5e-23 112.8 69 79.7
SEGI_40265 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 4.0e-16 90.5 100 44.0
MBI08_g35877_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 1.2e-15 89.0 63 66.7
SEGI_28051 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 1.2e-15 89.0 70 64.3
CBR_g669 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-14 85.5 125 36.0
CBR_g671 Chara braunii HOM05D008447 ORTHO05D010638 1.9e-10 71.6 62 51.6
SEGI_06266 Sequoiadendron giganteum HOM05D008447 ORTHO05D384438 8.1e-09 66.2 51 58.8
Pp3c23_15810 Physcomitrium patens HOM05D005554 ORTHO05D007823 2.6e-07 61.2 262 25.2
Mapoly0106s0042 Marchantia polymorpha HOM05D008474 ORTHO05D010618 5.8e-07 60.1 166 29.5
AagrBONN_evm.TU.Sc2ySwM_228.1600 Anthoceros agrestis HOM05D005554 ORTHO05D007823 4.9e-06 57.0 265 25.7


User provided reference genes

Program Settings