Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0835 Trochodendron aralioides HOM05D000314 ORTHO05D000189 5.9e-52 207.2 103 100.0
TAR636G3622 Trochodendron aralioides HOM05D000314 ORTHO05D000189 2.7e-20 102.1 90 62.2
TAR633G1197 Trochodendron aralioides HOM05D000314 ORTHO05D000189 2.3e-19 99.0 99 53.5
Nn6g34622 Nelumbo nucifera HOM05D000314 ORTHO05D000189 8.1e-17 90.5 90 51.1
Nn2g14366 Nelumbo nucifera HOM05D000314 ORTHO05D000189 5.8e-15 84.3 92 56.5
Dinv03814 Davidia involucrata HOM05D000314 ORTHO05D000189 7.6e-15 84.0 89 48.3
Cc02_g09300 Coffea canephora HOM05D000314 ORTHO05D000189 5.4e-13 77.8 90 46.7
Dinv01279 Davidia involucrata HOM05D000314 ORTHO05D000189 9.3e-13 77.0 87 48.3
QL04p048596 Quercus lobata HOM05D000314 ORTHO05D000189 1.2e-12 76.6 100 42.0
RhsimUnG0029400 Rhododendron simsii HOM05D000314 ORTHO05D000189 1.6e-12 76.3 91 45.1
GSVIVG01034614001 Vitis vinifera HOM05D000314 ORTHO05D000189 3.5e-12 75.1 102 41.2
Rhsim03G0094300 Rhododendron simsii HOM05D000314 ORTHO05D000189 4.6e-12 74.7 91 46.2
Prupe.2G073600 Prunus persica HOM05D000314 ORTHO05D000189 7.8e-12 73.9 88 45.5
TPR.G10269 Trifolium pratense HOM05D000314 ORTHO05D000189 7.8e-12 73.9 91 48.4
vmacro07274 Vaccinium macrocarpon HOM05D000314 ORTHO05D000189 7.8e-12 73.9 93 44.1
Lj2C36T8 Lonicera japonica HOM05D000314 ORTHO05D000189 1.0e-11 73.6 88 48.9
MBI11_g18532_MAGBIO Magnolia biondii HOM05D000314 ORTHO05D000189 1.0e-11 73.6 89 46.1
Psat6g171640 Pisum sativum HOM05D000314 ORTHO05D000189 2.3e-11 72.4 94 47.9
VMungo0720G1777 Vigna mungo HOM05D000314 ORTHO05D000189 2.3e-11 72.4 105 42.9
Aqoxy1G00619 Aquilegia oxysepala HOM05D000314 ORTHO05D000189 3.0e-11 72.0 104 40.4
Lj5g0006764 Lotus japonicus HOM05D000314 ORTHO05D000189 6.6e-11 70.9 88 48.9
MSTRG.9028 Avicennia marina HOM05D000314 ORTHO05D000189 1.5e-10 69.7 91 44.0
Actinidia34064 Actinidia chinensis HOM05D000314 ORTHO05D000189 2.5e-10 68.9 87 44.8
Ca_10427_v3 Cicer arietinum L. HOM05D000314 ORTHO05D000189 2.5e-10 68.9 92 42.4
Manes.10G064400 Manihot esculenta HOM05D000314 ORTHO05D000189 3.3e-10 68.6 102 36.3
Manes.07G084800 Manihot esculenta HOM05D000314 ORTHO05D000189 7.3e-10 67.4 102 37.3
Thecc.10G118800 Theobroma cacao HOM05D000314 ORTHO05D000189 7.3e-10 67.4 91 40.7
Duzib106G1525 Durio zibethinus HOM05D000314 ORTHO05D000189 9.6e-10 67.0 107 41.1
Medtr1g090400 Medicago truncatula HOM05D000314 ORTHO05D000189 9.6e-10 67.0 91 39.6
Duzib128G0192 Durio zibethinus HOM05D000314 ORTHO05D000189 1.3e-09 66.6 107 38.3
Migut.F00833 Erythranthe guttata HOM05D000314 ORTHO05D000189 2.1e-09 65.9 89 42.7
Oeu040011.1 Olea europaea HOM05D000314 ORTHO05D000189 2.1e-09 65.9 89 42.7
Hma1.2p1_0153F.1_g067810 Hydrangea macrophylla HOM05D000314 ORTHO05D000189 2.8e-09 65.5 89 40.4
Actinidia06679 Actinidia chinensis HOM05D000314 ORTHO05D000189 3.6e-09 65.1 87 39.1
Atru.chr12.1086 Acer truncatum HOM05D000314 ORTHO05D000189 4.8e-09 64.7 87 47.1
Oeu025603.2 Olea europaea HOM05D000314 ORTHO05D000189 6.2e-09 64.3 103 36.9
TWI15G1032 Tripterygium wilfordii HOM05D000314 ORTHO05D000189 6.2e-09 64.3 92 45.7
COL.COLO4_26792 Corchorus olitorius HOM05D000031 ORTHO05D000030 1.4e-08 63.2 96 41.7
MD07G1062500 Malus domestica HOM05D000314 ORTHO05D000189 1.4e-08 63.2 92 45.7
Potri.010G243700 Populus trichocarpa HOM05D000314 ORTHO05D000189 1.8e-08 62.8 98 40.8
Phvul.007G137300 Phaseolus vulgaris HOM05D000314 ORTHO05D000189 2.4e-08 62.4 92 43.5
Sabra10G0190500 Salix brachista HOM05D000314 ORTHO05D000189 2.4e-08 62.4 106 36.8
Lsat_1_v5_gn_2_106200 Lactuca sativa HOM05D000314 ORTHO05D000189 4.0e-08 61.6 87 42.5
Nitab4.5_0003986g0010 Nicotiana tabacum HOM05D000314 ORTHO05D000189 4.0e-08 61.6 97 42.3
Gohir.A13G003200 Gossypium hirsutum HOM05D000314 ORTHO05D000189 5.3e-08 61.2 87 41.4
Gohir.D13G003100 Gossypium hirsutum HOM05D000314 ORTHO05D000189 6.9e-08 60.8 89 40.4
Gorai.013G003000 Gossypium raimondii HOM05D000314 ORTHO05D000189 6.9e-08 60.8 89 40.4
Eucgr.J00303 Eucalyptus grandis HOM05D000314 ORTHO05D000189 9.0e-08 60.5 91 38.5
CiPaw.13G044900 Carya illinoinensis HOM05D000314 ORTHO05D000189 1.2e-07 60.1 88 40.9
Oeu033269.1 Olea europaea HOM05D000314 ORTHO05D000189 2.0e-07 59.3 86 39.5
arahy.Tifrunner.gnm1.ann1.4N5B4T Arachis hypogaea HOM05D000314 ORTHO05D000189 2.6e-07 58.9 93 35.5
Nitab4.5_0001781g0160 Nicotiana tabacum HOM05D000314 ORTHO05D000189 2.6e-07 58.9 97 39.2
CAN.G143.51 Capsicum annuum HOM05D000314 ORTHO05D000189 3.4e-07 58.5 102 36.3
PGR044G1159 Punica granatum HOM05D000314 ORTHO05D000189 3.4e-07 58.5 95 36.8
arahy.Tifrunner.gnm1.ann1.4TYP4V Arachis hypogaea HOM05D000314 ORTHO05D000189 5.8e-07 57.8 109 35.8
HanXRQChr14g0455541 Helianthus annuus HOM05D000314 ORTHO05D000189 5.8e-07 57.8 92 39.1
Cpa.g.sc33.131 Carica papaya HOM05D000314 ORTHO05D000189 9.9e-07 57.0 91 39.6
Glyma.10G195200 Glycine max HOM05D000314 ORTHO05D000189 1.3e-06 56.6 88 39.8
Sabra08G0009800 Salix brachista HOM05D000314 ORTHO05D000189 1.3e-06 56.6 95 36.8
Sabra08G0010000 Salix brachista HOM05D000314 ORTHO05D000189 1.3e-06 56.6 95 36.8
CANSAT56G0913 Cannabis sativa HOM05D000314 ORTHO05D000189 1.7e-06 56.2 84 38.1
Solyc11g006430.1 Solanum lycopersicum HOM05D000314 ORTHO05D000189 1.7e-06 56.2 92 41.3
Sopen11g002330 Solanum pennellii HOM05D000314 ORTHO05D000189 2.9e-06 55.5 92 40.2
Duzib128G1608 Durio zibethinus HOM05D000314 ORTHO05D000189 3.8e-06 55.1 90 43.3
Ah.06g191180 Amaranthus hybridus HOM05D000314 ORTHO05D000189 4.9e-06 54.7 88 39.8
MD02G1258300 Malus domestica HOM05D000314 ORTHO05D000189 4.9e-06 54.7 95 42.1


User provided reference genes

Program Settings