Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0820 Trochodendron aralioides HOM05D049058 ORTHO05D005167 6.3e-140 500.7 249 100.0
TAR369G0648 Trochodendron aralioides HOM05D049058 ORTHO05D005167 4.3e-72 275.4 136 99.3
TAR375G0027 Trochodendron aralioides HOM05D003893 ORTHO05D005167 1.8e-14 84.0 67 70.1
TAR374G0942 Trochodendron aralioides HOM05D000827 ORTHO05D001576 1.1e-11 74.7 43 88.4
DCAR_005586 Daucus carota HOM05D003893 ORTHO05D005167 2.7e-10 70.1 104 44.2
FvH4_5g20370 Fragaria vesca HOM05D003893 ORTHO05D005167 6.1e-10 68.9 110 42.7
FAN18G3472 Fragaria x ananassa HOM05D003893 ORTHO05D005167 6.1e-10 68.9 110 42.7
FAN08G3381 Fragaria x ananassa HOM05D003893 ORTHO05D005167 8.0e-10 68.6 110 42.7
MD04G1055600 Malus domestica HOM05D003893 ORTHO05D005167 1.0e-09 68.2 67 56.7
Prupe.5G055400 Prunus persica HOM05D003893 ORTHO05D005167 1.4e-09 67.8 67 56.7
GSVIVG01003688001 Vitis vinifera HOM05D003893 ORTHO05D005167 1.8e-09 67.4 67 56.7
CANSAT21G1178 Cannabis sativa HOM05D003893 ORTHO05D005167 2.3e-09 67.0 67 55.2
Atru.chr9.1207 Acer truncatum HOM05D003893 ORTHO05D005167 6.7e-09 65.5 67 56.7
Manes.01G088800 Manihot esculenta HOM05D003893 ORTHO05D005167 6.7e-09 65.5 67 53.7
PGR042G1290 Punica granatum HOM05D003893 ORTHO05D005167 6.7e-09 65.5 113 40.7
Oeu054285.1 Olea europaea HOM05D003893 ORTHO05D005167 8.8e-09 65.1 110 44.5
Potri.001G150900 Populus trichocarpa HOM05D003893 ORTHO05D005167 8.8e-09 65.1 67 53.7
RcHm_v2.0_Chr7g0205631 Rosa chinensis HOM05D003893 ORTHO05D005167 8.8e-09 65.1 67 55.2
Ciclev10024446m.g Citrus clementina HOM05D003893 ORTHO05D005167 1.2e-08 64.7 85 47.1
Sabra01G0120900 Salix brachista HOM05D003893 ORTHO05D005167 1.2e-08 64.7 97 42.3
Lj8C277G4 Lonicera japonica HOM05D003893 ORTHO05D005167 1.5e-08 64.3 66 53.0
QL12p008764 Quercus lobata HOM05D003893 ORTHO05D005167 2.0e-08 63.9 74 50.0
Gohir.A12G212800 Gossypium hirsutum HOM05D003893 ORTHO05D005167 5.7e-08 62.4 102 40.2
CAN.G572.10 Capsicum annuum HOM05D003893 ORTHO05D005167 1.3e-07 61.2 67 49.3
Gohir.D12G215300 Gossypium hirsutum HOM05D003893 ORTHO05D005167 1.3e-07 61.2 96 40.6
COL.COLO4_07201 Corchorus olitorius HOM05D003893 ORTHO05D005167 2.8e-07 60.1 96 39.6
Nitab4.5_0000500g0300 Nicotiana tabacum HOM05D003893 ORTHO05D005167 2.8e-07 60.1 67 50.7
CiPaw.11G072600 Carya illinoinensis HOM05D003893 ORTHO05D005167 3.7e-07 59.7 67 52.2
Gorai.008G230900 Gossypium raimondii HOM05D003893 ORTHO05D005167 3.7e-07 59.7 96 39.6
CSS0002187 Camellia sinensis var. sinensis HOM05D003893 ORTHO05D005167 6.3e-07 58.9 67 55.2
Duzib205G1731 Durio zibethinus HOM05D003893 ORTHO05D005167 6.3e-07 58.9 42 69.0
Thecc.03G240200 Theobroma cacao HOM05D003893 ORTHO05D005167 8.2e-07 58.5 67 49.3
Dinv25135 Davidia involucrata HOM05D003893 ORTHO05D005167 1.1e-06 58.2 67 52.2
Cc08_g11340 Coffea canephora HOM05D003893 ORTHO05D005167 1.4e-06 57.8 67 50.7
Peaxi162Scf00301g00417 Petunia axillaris HOM05D003893 ORTHO05D005167 1.4e-06 57.8 103 35.9
Eucgr.E00353 Eucalyptus grandis HOM05D003893 ORTHO05D005167 4.1e-06 56.2 67 52.2
Solyc08g077850.2 Solanum lycopersicum HOM05D003893 ORTHO05D005167 4.1e-06 56.2 67 46.3
Sopen08g026360 Solanum pennellii HOM05D003893 ORTHO05D005167 4.1e-06 56.2 67 46.3
Rhsim11G0002100 Rhododendron simsii HOM05D003893 ORTHO05D005167 5.3e-06 55.8 67 49.3
Hund14479 Selenicereus undatus HOM05D003893 ORTHO05D005167 5.3e-06 55.8 67 50.7
vmacro17755 Vaccinium macrocarpon HOM05D003893 ORTHO05D005167 5.3e-06 55.8 64 54.7
TAR636G3591 Trochodendron aralioides HOM05D003741 ORTHO05D004247 9.1e-06 55.1 29 89.7


User provided reference genes

Program Settings