Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 2.7e-129 465.3 227 100.0
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 3.9e-96 355.1 230 74.3
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 3.9e-96 355.1 227 72.2
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 1.5e-95 353.2 227 74.9
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 5.3e-93 344.7 228 74.6
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 1.2e-92 343.6 211 74.4
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 2.6e-92 342.4 213 74.6
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 3.4e-92 342.0 226 73.5
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 4.4e-92 341.7 212 74.5
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 7.6e-92 340.9 214 73.8
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 9.9e-92 340.5 227 70.9
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 1.3e-91 340.1 211 73.5
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 2.9e-91 339.0 226 71.2
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.7e-89 332.4 226 72.1
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 7.8e-89 330.9 213 71.8
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 1.7e-88 329.7 225 71.1
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 1.1e-87 327.0 227 69.2
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 1.5e-87 326.6 227 67.4
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 2.5e-87 325.9 210 71.0
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 4.3e-87 325.1 229 69.0
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 8.1e-86 320.9 227 67.8
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 8.1e-86 320.9 225 66.7
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 8.1e-86 320.9 230 64.8
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 1.1e-85 320.5 229 67.7
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 1.1e-85 320.5 228 68.0
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 1.8e-85 319.7 213 70.0
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 2.4e-85 319.3 225 64.4
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 3.1e-85 318.9 225 66.7
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 3.1e-85 318.9 225 66.7
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 3.1e-85 318.9 211 66.8
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 4.0e-85 318.5 227 67.4
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 4.0e-85 318.5 214 69.2
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 6.9e-85 317.8 230 67.8
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 2.0e-84 316.2 203 70.0
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 2.6e-84 315.8 227 67.4
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 2.6e-84 315.8 231 65.8
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 4.5e-84 315.1 234 63.2
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 4.5e-84 315.1 215 67.4
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 4.5e-84 315.1 214 69.6
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 5.8e-84 314.7 223 65.9
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 7.6e-84 314.3 208 68.8
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 7.6e-84 314.3 231 64.1
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 7.6e-84 314.3 225 64.4
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 9.9e-84 313.9 228 64.5
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 9.9e-84 313.9 222 67.1
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 2.9e-83 312.4 223 65.5
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 3.8e-83 312.0 215 67.4
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 4.9e-83 311.6 213 65.3
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 4.9e-83 311.6 215 68.8
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 1.1e-82 310.5 215 67.4
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 1.4e-82 310.1 213 69.0
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 3.2e-82 308.9 227 64.3
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 4.2e-82 308.5 214 65.9
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 5.4e-82 308.1 226 66.4
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 1.6e-81 306.6 217 65.4
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 3.5e-81 305.4 226 64.6
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 1.3e-80 303.5 211 66.4
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 1.8e-80 303.1 214 64.5
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 1.8e-80 303.1 216 64.8
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 1.8e-80 303.1 216 64.8
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 1.8e-80 303.1 213 63.8
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 3.0e-80 302.4 225 65.3
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 3.9e-80 302.0 214 63.6
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 6.7e-80 301.2 213 65.3
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 8.7e-80 300.8 227 61.7
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 8.7e-80 300.8 209 64.1
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 1.9e-79 299.7 225 64.4
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 1.9e-79 299.7 216 64.8
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 3.3e-79 298.9 227 61.2
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 4.3e-79 298.5 221 62.0
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 4.3e-79 298.5 217 62.7
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 9.6e-79 297.4 225 63.1
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 1.6e-78 296.6 229 62.9
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 1.6e-78 296.6 213 63.8
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 1.1e-77 293.9 233 58.8
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 1.5e-76 290.0 210 65.2
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 1.3e-75 287.0 227 63.4
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 2.2e-75 286.2 213 66.2
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 1.4e-74 283.5 198 65.7
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 1.2e-73 280.4 216 63.4
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 3.5e-73 278.9 185 67.0
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 3.7e-70 268.9 198 64.6
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 2.4e-69 266.2 160 76.2
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 5.3e-69 265.0 196 64.3
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 6.1e-65 251.5 176 66.5
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 1.8e-64 250.0 211 57.3
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 2.3e-64 249.6 201 58.7
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 3.0e-64 249.2 184 63.6
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 1.1e-63 247.3 247 53.8
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 1.5e-63 246.9 183 61.2
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 3.3e-63 245.7 204 55.9
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 3.1e-61 239.2 176 61.9
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 2.6e-60 236.1 178 59.6
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 7.7e-60 234.6 188 63.8
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 3.6e-57 225.7 165 64.2
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 5.1e-56 221.9 250 49.6
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 6.5e-51 204.9 130 76.2
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 6.7e-48 194.9 194 51.0
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 3.1e-45 186.0 108 77.8
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 5.3e-45 185.3 201 46.8
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 3.5e-44 182.6 176 47.2
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 1.7e-43 180.3 213 43.7
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 8.0e-33 144.8 162 49.4
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 2.5e-26 123.2 97 58.8
Zm00001eb286980 Zea mays HOM05D007137 ORTHO05D008982 5.5e-26 122.1 87 59.8
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 6.1e-25 118.6 81 69.1
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 3.1e-21 106.3 89 50.6
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 9.5e-18 94.7 88 50.0
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 1.7e-11 73.9 96 40.6
Rhsim03G0024500 Rhododendron simsii HOM05D007137 ORTHO05D008982 4.0e-08 62.8 59 55.9


User provided reference genes

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