Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0809 Trochodendron aralioides HOM05D004925 ORTHO05D005643 9.4e-184 646.7 329 100.0
TAR623G0394 Trochodendron aralioides HOM05D004925 ORTHO05D005643 6.0e-130 468.0 327 75.5
Nn2g15712 Nelumbo nucifera HOM05D004925 ORTHO05D005643 1.1e-104 384.0 334 65.3
Dinv43931 Davidia involucrata HOM05D004925 ORTHO05D005643 5.1e-81 305.4 323 54.8
Dinv43491 Davidia involucrata HOM05D004925 ORTHO05D005643 9.7e-80 301.2 301 56.8
Hma1.2p1_0860F.1_g229570 Hydrangea macrophylla HOM05D004925 ORTHO05D005643 2.5e-72 276.6 349 51.0
GSVIVG01001367001 Vitis vinifera HOM05D004925 ORTHO05D005643 4.3e-72 275.8 327 53.8
MBI19_g23208_MAGBIO Magnolia biondii HOM05D004925 ORTHO05D005643 3.0e-65 253.1 345 49.0
ClCG10G012660 Citrullus lanatus HOM05D004925 ORTHO05D005643 1.3e-63 247.7 319 47.3
CsaV3_3G032460 Cucumis sativus L. HOM05D004925 ORTHO05D005643 4.8e-63 245.7 315 46.0
Cfa004806 Carpinus fangiana HOM05D004925 ORTHO05D005643 1.3e-60 237.7 336 45.2
CiPaw.13G000800 Carya illinoinensis HOM05D004925 ORTHO05D005643 1.2e-58 231.1 263 52.5
Manes.10G151100 Manihot esculenta HOM05D004925 ORTHO05D005643 2.7e-58 229.9 334 46.1
Rhsim01G0134400 Rhododendron simsii HOM05D004925 ORTHO05D005643 1.8e-57 227.3 355 44.2
TWI09G1281 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 3.0e-57 226.5 327 44.6
Aqoxy1G00133 Aquilegia oxysepala HOM05D004925 ORTHO05D005643 1.1e-56 224.6 331 45.9
MELO3C030929.2 Cucumis melo HOM05D004925 ORTHO05D005643 3.3e-56 223.0 373 41.3
Atru.chr11.2695 Acer truncatum HOM05D004925 ORTHO05D005643 4.8e-55 219.2 267 50.6
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 8.2e-55 218.4 250 50.8
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 8.2e-55 218.4 250 50.8
CANSAT11G0505 Cannabis sativa HOM05D004925 ORTHO05D005643 7.0e-54 215.3 341 41.6
Actinidia15855 Actinidia chinensis HOM05D004925 ORTHO05D005643 7.7e-53 211.8 372 42.7
vmacro12585 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 1.7e-52 210.7 311 46.0
TWI73G1095 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 2.2e-52 210.3 294 44.6
Potri.001G229800 Populus trichocarpa HOM05D004925 ORTHO05D005643 5.2e-49 199.1 352 41.8
Peaxi162Scf00878g00036 Petunia axillaris HOM05D004925 ORTHO05D005643 2.6e-48 196.8 310 45.2
PSO384G4128 Papaver somniferum HOM05D004925 ORTHO05D005643 7.5e-48 195.3 332 41.3
QL04p000066 Quercus lobata HOM05D004925 ORTHO05D005643 9.7e-48 194.9 307 43.3
Sed0010000 Sechium edule HOM05D004925 ORTHO05D005643 1.3e-47 194.5 313 41.5
Sc17g0006850 Simmondsia chinensis HOM05D004925 ORTHO05D005643 2.2e-47 193.7 296 44.9
Hund25510 Selenicereus undatus HOM05D004925 ORTHO05D005643 6.3e-47 192.2 342 39.2
CDE04G0753 Ceratophyllum demersum HOM05D004925 ORTHO05D005643 5.3e-46 189.1 311 42.4
THA.LOC104801020 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 5.3e-46 189.1 300 43.7
Sopen01g033490 Solanum pennellii HOM05D004925 ORTHO05D005643 1.2e-45 188.0 329 43.2
MD02G1318600 Malus domestica HOM05D004925 ORTHO05D005643 5.9e-45 185.7 323 40.9
Solyc01g073920.3 Solanum lycopersicum HOM05D004925 ORTHO05D005643 1.0e-44 184.9 329 42.6
Nitab4.5_0000892g0140 Nicotiana tabacum HOM05D004925 ORTHO05D005643 1.3e-44 184.5 354 40.4
MD07G1002600 Malus domestica HOM05D004925 ORTHO05D005643 3.8e-44 183.0 333 40.2
AL4G28340 Arabidopsis lyrata HOM05D004925 ORTHO05D005643 5.0e-44 182.6 288 42.0
MSTRG.5000 Avicennia marina HOM05D004925 ORTHO05D005643 8.5e-44 181.8 312 42.0
Oeu053533.1 Olea europaea HOM05D004925 ORTHO05D005643 1.5e-43 181.0 317 42.3
CAN.G261.6 Capsicum annuum HOM05D004925 ORTHO05D005643 2.5e-43 180.3 175 57.1
QL04p003160 Quercus lobata HOM05D004925 ORTHO05D005643 2.5e-43 180.3 352 39.5
SalBow4G1354 Salvia bowleyana HOM05D004925 ORTHO05D005643 2.5e-43 180.3 260 46.9
SalBow4G3044 Salvia bowleyana HOM05D004925 ORTHO05D005643 4.2e-43 179.5 260 46.9
PSO339G6120 Papaver somniferum HOM05D004925 ORTHO05D005643 7.2e-43 178.7 263 44.9
Carub.0004s1427 Capsella rubella HOM05D004925 ORTHO05D005643 9.4e-43 178.3 293 41.0
vmacro21158 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 9.4e-43 178.3 324 41.4
Cc02_g27070 Coffea canephora HOM05D004925 ORTHO05D005643 1.0e-41 174.9 273 44.7
COL.COLO4_25137 Corchorus olitorius HOM05D004925 ORTHO05D005643 1.8e-41 174.1 260 43.5
ECA248G0029 Erigeron canadensis HOM05D004925 ORTHO05D005643 1.8e-41 174.1 252 44.8
HanXRQChr01g0018661 Helianthus annuus HOM05D004925 ORTHO05D005643 3.0e-41 173.3 257 44.7
Migut.N01664 Erythranthe guttata HOM05D004925 ORTHO05D005643 4.0e-41 172.9 254 45.7
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 6.8e-41 172.2 288 40.6
SGA_v2.0_scaffold95G28775 Striga asiatica HOM05D004925 ORTHO05D005643 2.0e-40 170.6 298 41.6
Lsat_1_v5_gn_1_110881 Lactuca sativa HOM05D004925 ORTHO05D005643 9.8e-40 168.3 306 40.5
AT2G32840 Arabidopsis thaliana HOM05D004925 ORTHO05D005643 2.2e-39 167.2 317 39.4
Cpa.g.sc189.17 Carica papaya HOM05D004925 ORTHO05D005643 4.8e-39 166.0 163 58.9
Gohir.D08G037401 Gossypium hirsutum HOM05D004925 ORTHO05D005643 6.3e-39 165.6 164 53.7
Thhalv10016920m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 1.8e-38 164.1 328 37.8
Sp4g15220 Schrenkiella parvula HOM05D004925 ORTHO05D005643 2.4e-38 163.7 329 37.1
Sed0003173 Sechium edule HOM05D004925 ORTHO05D005643 2.4e-38 163.7 324 36.7
CARHR126790 Cardamine hirsuta HOM05D004925 ORTHO05D005643 3.1e-38 163.3 314 38.9
Gorai.004G035400 Gossypium raimondii HOM05D004925 ORTHO05D005643 5.4e-38 162.5 260 41.2
Thecc.01G416300 Theobroma cacao HOM05D004925 ORTHO05D005643 5.4e-38 162.5 298 36.9
Ciclev10032226m.g Citrus clementina HOM05D004925 ORTHO05D005643 1.6e-37 161.0 267 41.6
arahy.Tifrunner.gnm1.ann1.WEBP2W Arachis hypogaea HOM05D004925 ORTHO05D005643 2.7e-37 160.2 255 42.0
FAN03G1097 Fragaria x ananassa HOM05D004925 ORTHO05D005643 2.7e-37 160.2 223 44.4
Gohir.A08G026720 Gossypium hirsutum HOM05D004925 ORTHO05D005643 4.5e-37 159.5 278 38.8
PGR119G0958 Punica granatum HOM05D004925 ORTHO05D005643 4.5e-37 159.5 292 40.4
Sp1g03770 Schrenkiella parvula HOM05D004925 ORTHO05D005643 1.0e-36 158.3 313 38.7
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 2.9e-36 156.8 334 35.3
FAN10G2396 Fragaria x ananassa HOM05D004925 ORTHO05D005643 3.8e-36 156.4 245 42.0
Glyma.08G148900 Glycine max HOM05D004925 ORTHO05D005643 3.8e-36 156.4 230 43.9
RcHm_v2.0_Chr1g0313411 Rosa chinensis HOM05D004925 ORTHO05D005643 5.0e-36 156.0 220 42.7
FAN06G2494 Fragaria x ananassa HOM05D004925 ORTHO05D005643 8.6e-36 155.2 151 55.0
Aa31LG5G4490 Aethionema arabicum HOM05D004925 ORTHO05D005643 1.9e-35 154.1 323 39.0
Duzib114G0283 Durio zibethinus HOM05D004925 ORTHO05D005643 2.5e-35 153.7 259 40.2
FAN01G0312 Fragaria x ananassa HOM05D004925 ORTHO05D005643 2.5e-35 153.7 232 43.5
FAN01G2076 Fragaria x ananassa HOM05D004925 ORTHO05D005643 3.3e-35 153.3 229 43.7
Lj3g0011601 Lotus japonicus HOM05D004925 ORTHO05D005643 5.5e-35 152.5 324 39.5
FvH4_7g00160 Fragaria vesca HOM05D004925 ORTHO05D005643 7.2e-35 152.1 243 41.6
Oeu024926.1 Olea europaea HOM05D004925 ORTHO05D005643 1.2e-34 151.4 414 33.3
Glyma.15G269200 Glycine max HOM05D004925 ORTHO05D005643 3.6e-34 149.8 293 37.2
arahy.Tifrunner.gnm1.ann1.BFX48A Arachis hypogaea HOM05D004925 ORTHO05D005643 4.7e-34 149.4 258 41.1
Eucgr.G03409 Eucalyptus grandis HOM05D004925 ORTHO05D005643 6.1e-34 149.1 260 39.6
Phvul.005G039900 Phaseolus vulgaris HOM05D004925 ORTHO05D005643 6.1e-34 149.1 196 47.4
Ca_02951_v3 Cicer arietinum L. HOM05D004925 ORTHO05D005643 3.0e-33 146.7 257 42.0
BraA10t42612Z Brassica rapa HOM05D004925 ORTHO05D005643 6.8e-33 145.6 344 36.6
A10p03360 Brassica napus HOM05D004925 ORTHO05D005643 8.9e-33 145.2 342 36.8
Lalb_Chr03g0033881 Lupinus albus HOM05D004925 ORTHO05D005643 1.2e-32 144.8 159 52.8
Lalb_Chr25g0283541 Lupinus albus HOM05D004925 ORTHO05D005643 2.2e-31 140.6 268 36.9
Medtr2g060910 Medicago truncatula HOM05D004925 ORTHO05D005643 3.7e-31 139.8 189 47.1
Rhsim06G0015600 Rhododendron simsii HOM05D004925 ORTHO05D005643 3.7e-31 139.8 297 36.0
unitig_22.g5889 Utricularia gibba HOM05D004925 ORTHO05D005643 6.3e-31 139.0 312 35.6
A05p12810 Brassica napus HOM05D004925 ORTHO05D005643 8.3e-31 138.7 316 38.0
Prupe.2G004100 Prunus persica HOM05D004925 ORTHO05D005643 1.1e-30 138.3 303 36.3
CDE06G1226 Ceratophyllum demersum HOM05D004925 ORTHO05D005643 1.4e-30 137.9 334 35.3
CSS0015862 Camellia sinensis var. sinensis HOM05D004925 ORTHO05D005643 5.4e-30 136.0 137 54.7
Actinidia21578 Actinidia chinensis HOM05D004925 ORTHO05D005643 7.0e-30 135.6 182 47.3
Zm00001eb399260 Zea mays HOM05D004925 ORTHO05D005643 1.2e-29 134.8 337 33.8
TPR.G11699 Trifolium pratense HOM05D004925 ORTHO05D005643 2.7e-29 133.7 140 54.3
C04p16720 Brassica napus HOM05D004925 ORTHO05D005643 5.9e-29 132.5 315 37.1
C05p03080 Brassica napus HOM05D004925 ORTHO05D005643 7.8e-29 132.1 310 37.1
HanXRQChr11g0341641 Helianthus annuus HOM05D004925 ORTHO05D005643 5.0e-28 129.4 156 47.4
HanXRQChr11g0341651 Helianthus annuus HOM05D004925 ORTHO05D005643 5.0e-28 129.4 153 49.0
BraA05t20219Z Brassica rapa HOM05D004925 ORTHO05D005643 1.1e-27 128.3 322 37.3
BcaB01g00977 Brassica carinata HOM05D004925 ORTHO05D005643 4.3e-27 126.3 307 37.5
BcaB02g10501 Brassica carinata HOM05D004925 ORTHO05D005643 4.3e-27 126.3 239 41.0
AT1G04930 Arabidopsis thaliana HOM05D004925 ORTHO05D005643 7.3e-27 125.6 250 36.4
Medtr4g125960 Medicago truncatula HOM05D004925 ORTHO05D005643 7.3e-27 125.6 285 36.5
Thhalv10009447m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 1.2e-26 124.8 155 48.4
BolC4t23220H Brassica oleracea HOM05D004925 ORTHO05D005643 1.6e-26 124.4 315 35.2
Nitab4.5_0005278g0010 Nicotiana tabacum HOM05D004925 ORTHO05D005643 1.6e-26 124.4 289 38.8
HanXRQChr11g0341871 Helianthus annuus HOM05D004925 ORTHO05D005643 2.8e-26 123.6 133 49.6
THA.LOC104816029 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 1.2e-24 118.2 194 41.2
BolC5t29090H Brassica oleracea HOM05D004925 ORTHO05D005643 2.0e-24 117.5 337 34.1
AUR62015612 Chenopodium quinoa HOM05D004925 ORTHO05D005643 2.9e-23 113.6 139 50.4
SGA_v2.0_scaffold4G02236 Striga asiatica HOM05D001227 ORTHO05D001082 3.7e-23 113.2 277 33.9
CARHR004330 Cardamine hirsuta HOM05D004925 ORTHO05D005643 1.4e-22 111.3 152 44.1
Aa31LG1G19930 Aethionema arabicum HOM05D004925 ORTHO05D005643 2.4e-22 110.5 324 31.2
ATR0598G164 Amborella trichopoda HOM05D004925 ORTHO05D005643 2.4e-22 110.5 265 37.0
AL1G14650 Arabidopsis lyrata HOM05D004925 ORTHO05D005643 2.0e-21 107.5 272 33.1
HPP92_020314 Vanilla planifolia HOM05D004925 ORTHO05D005643 1.3e-20 104.8 357 31.9
SEGI_38326 Sequoiadendron giganteum HOM05D004925 ORTHO05D005643 1.5e-19 101.3 225 36.0
EL10Ac8g20283 Beta vulgaris HOM05D004925 ORTHO05D005643 5.6e-19 99.4 299 30.8
Hma1.2p1_3637F.1_g337120 Hydrangea macrophylla HOM05D004925 ORTHO05D005643 2.1e-18 97.4 151 44.4
Mapoly0040s0118 Marchantia polymorpha HOM05D004925 ORTHO05D005643 1.4e-17 94.7 165 41.2
Os03g0234600 Oryza sativa ssp. japonica HOM05D004925 ORTHO05D005643 2.6e-16 90.5 208 34.1
HanXRQChr11g0341671 Helianthus annuus HOM05D004925 ORTHO05D005643 3.7e-15 86.7 209 36.4
Sabra16G0137200 Salix brachista HOM05D004925 ORTHO05D005643 8.3e-15 85.5 94 53.2
Sabra16G0137500 Salix brachista HOM05D004925 ORTHO05D005643 5.4e-14 82.8 227 33.0
Lj7A564G31 Lonicera japonica HOM05D004925 ORTHO05D005643 9.2e-14 82.0 93 44.1
CSS0038538 Camellia sinensis var. sinensis HOM05D004925 ORTHO05D005643 7.8e-13 79.0 84 47.6
Pp3c22_21740 Physcomitrium patens HOM05D004925 ORTHO05D005643 5.1e-12 76.3 200 32.0
Haze_10406 Corylus avellana HOM05D004925 ORTHO05D005643 6.6e-12 75.9 65 56.9
A09p67630 Brassica napus HOM05D004925 ORTHO05D005643 6.2e-10 69.3 109 41.3
Oeu013586.1 Olea europaea HOM05D004925 ORTHO05D005643 6.2e-10 69.3 56 55.4
PGSC0003DMG400006329 Solanum tuberosum HOM05D004925 ORTHO05D005643 1.8e-09 67.8 284 29.2
BcaB03g16450 Brassica carinata HOM05D000563 ORTHO05D005643 8.9e-09 65.5 92 40.2
BraA09t42096Z Brassica rapa HOM05D000053 ORTHO05D000035 8.9e-09 65.5 83 43.4
DCAR_024991 Daucus carota HOM05D004925 ORTHO05D005643 2.0e-08 64.3 228 28.9
BcaB03g16451 Brassica carinata HOM05D004925 ORTHO05D005643 2.6e-08 63.9 86 41.9
BcaB03g16455 Brassica carinata HOM05D004489 ORTHO05D005643 2.9e-07 60.5 86 39.5
SMO137G0159 Selaginella moellendorffii HOM05D004925 ORTHO05D005643 2.4e-06 57.4 218 28.0


User provided reference genes

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