Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0715 Trochodendron aralioides HOM05D005608 ORTHO05D007543 8.5e-173 610.1 289 100.0
TAR369G0194 Trochodendron aralioides HOM05D005608 ORTHO05D007543 2.7e-171 605.1 289 99.3
TAR633G2234 Trochodendron aralioides HOM05D005608 ORTHO05D007543 3.5e-158 561.6 281 93.2
Nn2g15128 Nelumbo nucifera HOM05D005608 ORTHO05D007543 2.0e-153 545.8 279 90.7
QL07p003736 Quercus lobata HOM05D005608 ORTHO05D007543 7.5e-153 543.9 282 90.4
CiPaw.09G040300 Carya illinoinensis HOM05D005608 ORTHO05D007543 7.0e-151 537.3 282 90.1
GSVIVG01033232001 Vitis vinifera HOM05D005608 ORTHO05D007543 1.3e-149 533.1 282 88.3
Prupe.7G053400 Prunus persica HOM05D005608 ORTHO05D007543 2.3e-149 532.3 284 87.3
Haze_19791 Corylus avellana HOM05D005608 ORTHO05D007543 3.0e-149 531.9 282 89.0
Haze_19795 Corylus avellana HOM05D005608 ORTHO05D007543 3.0e-149 531.9 282 89.0
Ciclev10005572m.g Citrus clementina HOM05D005608 ORTHO05D007543 3.9e-149 531.6 283 87.6
Sabra06G0032700 Salix brachista HOM05D005608 ORTHO05D007543 3.9e-149 531.6 283 87.3
TWI77G0221 Tripterygium wilfordii HOM05D005608 ORTHO05D007543 1.1e-148 530.0 283 85.9
Atru.chr1.1230 Acer truncatum HOM05D005608 ORTHO05D007543 1.5e-148 529.6 283 88.0
PSO384G3225 Papaver somniferum HOM05D005608 ORTHO05D007543 1.5e-148 529.6 282 87.2
Cfa016779 Carpinus fangiana HOM05D005608 ORTHO05D007543 2.5e-148 528.9 282 88.3
PSO339G6269 Papaver somniferum HOM05D005608 ORTHO05D007543 2.5e-148 528.9 282 87.2
Potri.006G047000 Populus trichocarpa HOM05D005608 ORTHO05D007543 5.6e-148 527.7 283 86.6
EL10Ac3g07137 Beta vulgaris HOM05D005608 ORTHO05D007543 7.3e-148 527.3 283 87.6
Manes.08G052000 Manihot esculenta HOM05D005608 ORTHO05D007543 7.3e-148 527.3 282 86.2
Rhsim03G0028900 Rhododendron simsii HOM05D005608 ORTHO05D007543 7.3e-148 527.3 287 86.4
Hma1.2p1_0110F.1_g052840 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 9.5e-148 526.9 282 87.6
Hma1.2p1_1997F.1_g310445 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 9.5e-148 526.9 282 87.6
CANSAT80G2626 Cannabis sativa HOM05D005608 ORTHO05D007543 1.2e-147 526.6 283 85.9
Lj5g0018305 Lotus japonicus HOM05D005608 ORTHO05D007543 1.2e-147 526.6 284 85.9
CSS0026365 Camellia sinensis var. sinensis HOM05D005608 ORTHO05D007543 2.1e-147 525.8 282 86.2
FAN05G0975 Fragaria x ananassa HOM05D005608 ORTHO05D007543 2.1e-147 525.8 285 86.3
Nitab4.5_0001618g0150 Nicotiana tabacum HOM05D005608 ORTHO05D007543 2.1e-147 525.8 282 86.9
Gohir.A01G193800 Gossypium hirsutum HOM05D005608 ORTHO05D007543 2.8e-147 525.4 283 86.2
Nitab4.5_0000826g0060 Nicotiana tabacum HOM05D005608 ORTHO05D007543 2.8e-147 525.4 282 87.2
Actinidia39202 Actinidia chinensis HOM05D005608 ORTHO05D007543 3.6e-147 525.0 282 85.8
RcHm_v2.0_Chr3g0483631 Rosa chinensis HOM05D005608 ORTHO05D007543 3.6e-147 525.0 282 86.9
PGSC0003DMG401012699 Solanum tuberosum HOM05D005608 ORTHO05D007543 3.6e-147 525.0 282 86.9
MELO3C026333.2 Cucumis melo HOM05D005608 ORTHO05D007543 6.2e-147 524.2 283 85.5
MD14G1077300 Malus domestica HOM05D005608 ORTHO05D007543 8.0e-147 523.9 282 85.5
Thecc.05G148100 Theobroma cacao HOM05D005608 ORTHO05D007543 8.0e-147 523.9 283 85.5
Duzib106G2070 Durio zibethinus HOM05D005608 ORTHO05D007543 1.8e-146 522.7 283 86.2
Lj1A1125T63 Lonicera japonica HOM05D005608 ORTHO05D007543 1.8e-146 522.7 285 86.3
DCAR_013613 Daucus carota HOM05D005608 ORTHO05D007543 3.1e-146 521.9 285 84.9
Gohir.D01G184100 Gossypium hirsutum HOM05D005608 ORTHO05D007543 3.1e-146 521.9 283 86.6
Gorai.002G227600 Gossypium raimondii HOM05D005608 ORTHO05D007543 3.1e-146 521.9 283 86.6
Solyc04g016360.3 Solanum lycopersicum HOM05D005608 ORTHO05D007543 5.2e-146 521.2 282 86.2
FAN02G1028 Fragaria x ananassa HOM05D005608 ORTHO05D007543 1.2e-145 520.0 283 85.9
Oeu017928.1 Olea europaea HOM05D005608 ORTHO05D007543 2.6e-145 518.8 280 85.4
FvH4_6g24520 Fragaria vesca HOM05D005608 ORTHO05D007543 3.4e-145 518.5 282 85.8
Sopen04g008450 Solanum pennellii HOM05D005608 ORTHO05D007543 5.8e-145 517.7 282 85.5
Phvul.007G250500 Phaseolus vulgaris HOM05D005608 ORTHO05D007543 7.5e-145 517.3 282 84.8
vmacro21968 Vaccinium macrocarpon HOM05D005608 ORTHO05D007543 7.5e-145 517.3 283 85.5
CANSAT80G0897 Cannabis sativa HOM05D005608 ORTHO05D007543 9.8e-145 516.9 288 84.0
Sed0023334 Sechium edule HOM05D005608 ORTHO05D007543 1.7e-144 516.2 283 84.1
CAN.G676.7 Capsicum annuum HOM05D005608 ORTHO05D007543 2.9e-144 515.4 282 84.4
Sc19g0008540 Simmondsia chinensis HOM05D005608 ORTHO05D007543 2.9e-144 515.4 283 85.5
Eucgr.K02019 Eucalyptus grandis HOM05D005608 ORTHO05D007543 3.7e-144 515.0 284 84.5
Glyma.10G106900 Glycine max HOM05D005608 ORTHO05D007543 3.7e-144 515.0 283 84.5
CsaV3_4G027510 Cucumis sativus L. HOM05D005608 ORTHO05D007543 4.9e-144 514.6 283 84.1
Aqoxy2G00245 Aquilegia oxysepala HOM05D005608 ORTHO05D007543 8.3e-144 513.8 282 84.8
Lalb_Chr06g0173501 Lupinus albus HOM05D005608 ORTHO05D007543 8.3e-144 513.8 285 84.9
MSTRG.26133 Avicennia marina HOM05D005608 ORTHO05D007543 3.2e-143 511.9 282 83.3
Medtr1g052175 Medicago truncatula HOM05D005608 ORTHO05D007543 3.2e-143 511.9 276 84.4
FAN14G1555 Fragaria x ananassa HOM05D005608 ORTHO05D007543 5.4e-143 511.1 285 84.6
Hund24681 Selenicereus undatus HOM05D005608 ORTHO05D007543 1.6e-142 509.6 283 83.7
TPR.G19657 Trifolium pratense HOM05D005608 ORTHO05D007543 2.7e-142 508.8 284 82.4
Glyma.02G186700 Glycine max HOM05D005608 ORTHO05D007543 4.6e-142 508.1 283 83.7
VMungo0720G2960 Vigna mungo HOM05D005608 ORTHO05D007543 7.8e-142 507.3 283 82.7
Medtr4g008660 Medicago truncatula HOM05D005608 ORTHO05D007543 3.9e-141 505.0 277 83.4
Cc06_g18100 Coffea canephora HOM05D005608 ORTHO05D007543 5.1e-141 504.6 282 83.7
arahy.Tifrunner.gnm1.ann1.RCN63F Arachis hypogaea HOM05D005608 ORTHO05D007543 8.6e-141 503.8 283 84.5
THA.LOC104801987 Tarenaya hassleriana HOM05D005608 ORTHO05D007543 1.1e-140 503.4 281 82.2
HanXRQChr04g0125051 Helianthus annuus HOM05D005608 ORTHO05D007543 1.5e-140 503.1 286 84.3
MSTRG.19838 Avicennia marina HOM05D005608 ORTHO05D007543 5.6e-140 501.1 279 82.4
HPP92_001434 Vanilla planifolia HOM05D005608 ORTHO05D007543 9.5e-140 500.4 279 82.1
SGA_v2.0_scaffold273G46432 Striga asiatica HOM05D005608 ORTHO05D007543 1.6e-139 499.6 270 84.8
Migut.J01725 Erythranthe guttata HOM05D005608 ORTHO05D007543 8.1e-139 497.3 280 83.6
AUR62026096 Chenopodium quinoa HOM05D005608 ORTHO05D007543 1.4e-138 496.5 300 79.0
SalBow6G4364 Salvia bowleyana HOM05D005608 ORTHO05D007543 1.4e-138 496.5 281 80.8
CDE05G0378 Ceratophyllum demersum HOM05D005608 ORTHO05D007543 5.2e-138 494.6 278 81.3
BcaB01g03463 Brassica carinata HOM05D005608 ORTHO05D007543 1.2e-137 493.4 283 81.3
Ca_12257_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 2.0e-137 492.7 277 82.7
AT2G41530 Arabidopsis thaliana HOM05D005608 ORTHO05D007543 3.4e-137 491.9 278 83.5
BcaNung04068 Brassica carinata HOM05D005608 ORTHO05D007543 3.4e-137 491.9 283 82.0
Peaxi162Scf00130g00829 Petunia axillaris HOM05D005608 ORTHO05D007543 3.4e-137 491.9 282 80.9
Aa31LG1G23580 Aethionema arabicum HOM05D005608 ORTHO05D007543 4.4e-137 491.5 283 81.6
BcaC01g05330 Brassica carinata HOM05D005608 ORTHO05D007543 4.4e-137 491.5 283 81.3
Ca_12243_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 9.9e-137 490.3 281 81.5
Thhalv10017045m.g Eutrema salsugineum HOM05D005608 ORTHO05D007543 9.9e-137 490.3 283 80.6
ATR0721G011 Amborella trichopoda HOM05D005608 ORTHO05D007543 1.3e-136 490.0 274 81.4
arahy.Tifrunner.gnm1.ann1.QZL5XH Arachis hypogaea HOM05D005608 ORTHO05D007543 1.3e-136 490.0 297 79.8
A03p23310 Brassica napus HOM05D005608 ORTHO05D007543 1.3e-136 490.0 283 80.6
C03p27830 Brassica napus HOM05D005608 ORTHO05D007543 1.3e-136 490.0 283 81.3
BraA03t11549Z Brassica rapa HOM05D005608 ORTHO05D007543 1.3e-136 490.0 283 80.6
AL4G39630 Arabidopsis lyrata HOM05D005608 ORTHO05D007543 1.7e-136 489.6 283 81.6
CARHR136660 Cardamine hirsuta HOM05D005608 ORTHO05D007543 1.7e-136 489.6 283 82.0
BolC3t15154H Brassica oleracea HOM05D005608 ORTHO05D007543 2.2e-136 489.2 283 80.9
C04p02790 Brassica napus HOM05D005608 ORTHO05D007543 8.3e-136 487.3 282 82.6
BolC4t21919H Brassica oleracea HOM05D005608 ORTHO05D007543 8.3e-136 487.3 282 82.6
BraA05t19229Z Brassica rapa HOM05D005608 ORTHO05D007543 1.4e-135 486.5 283 81.6
ECA236G2378 Erigeron canadensis HOM05D005608 ORTHO05D007543 3.2e-135 485.3 273 83.2
A05p02350 Brassica napus HOM05D005608 ORTHO05D007543 9.2e-135 483.8 283 81.6
Sp4g23810 Schrenkiella parvula HOM05D005608 ORTHO05D007543 9.2e-135 483.8 282 80.1
Nitab4.5_0000636g0050 Nicotiana tabacum HOM05D005608 ORTHO05D007543 2.7e-134 482.3 283 80.6
Carub.0004s2382 Capsella rubella HOM05D005608 ORTHO05D007543 4.6e-134 481.5 283 80.6
Sed0008486 Sechium edule HOM05D005608 ORTHO05D007543 7.8e-134 480.7 283 78.1
SEGI_13354 Sequoiadendron giganteum HOM05D005608 ORTHO05D007543 1.1e-132 476.9 277 78.7
ClCG04G003700 Citrullus lanatus HOM05D005608 ORTHO05D007543 1.9e-132 476.1 283 79.5
Peaxi162Scf00130g00828 Petunia axillaris HOM05D005608 ORTHO05D007543 2.5e-132 475.7 282 80.1
Lsat_1_v5_gn_8_82180 Lactuca sativa HOM05D005608 ORTHO05D007543 1.8e-130 469.5 332 68.7
Os01g0939700 Oryza sativa ssp. japonica HOM05D005608 ORTHO05D007543 6.8e-130 467.6 278 78.1
Sed0024564 Sechium edule HOM05D005608 ORTHO05D007543 8.7e-125 450.7 282 73.4
Cpa.g.sc182.15 Carica papaya HOM05D005608 ORTHO05D007543 3.3e-124 448.7 246 85.4
Eucgr.K01713 Eucalyptus grandis HOM05D005608 ORTHO05D007543 4.0e-122 441.8 272 76.1
AUR62024510 Chenopodium quinoa HOM05D005608 ORTHO05D007543 1.3e-120 436.8 234 86.8
Pp3c11_8660 Physcomitrium patens HOM05D005608 ORTHO05D007543 2.2e-120 436.0 278 71.2
unitig_21.g20519 Utricularia gibba HOM05D005608 ORTHO05D007543 5.4e-119 431.4 285 74.4
MBI19_g29889_MAGBIO Magnolia biondii HOM05D005608 ORTHO05D007543 7.1e-119 431.0 233 84.5
Mapoly0020s0136 Marchantia polymorpha HOM05D005608 ORTHO05D007543 4.9e-112 408.3 278 67.6
MD12G1082500 Malus domestica HOM05D005608 ORTHO05D007543 6.0e-110 401.4 225 84.0
SMO174G0027 Selaginella moellendorffii HOM05D005608 ORTHO05D007543 1.5e-108 396.7 277 67.9
CBR_g12387 Chara braunii HOM05D005608 ORTHO05D007543 5.6e-108 394.8 277 66.4
Dinv39657 Davidia involucrata HOM05D005608 ORTHO05D007543 4.6e-102 375.2 196 90.3
Zm00001eb363240 Zea mays HOM05D005608 ORTHO05D007543 4.6e-102 375.2 218 79.8
COL.COLO4_32782 Corchorus olitorius HOM05D005608 ORTHO05D007543 2.8e-91 339.3 271 63.1
Cre03.g158800 Chlamydomonas reinhardtii HOM05D005608 ORTHO05D007543 1.4e-90 337.0 281 56.9
SalBow6G3992 Salvia bowleyana HOM05D005608 ORTHO05D007543 1.4e-87 327.0 286 57.7
Psat6g091560 Pisum sativum HOM05D005608 ORTHO05D007543 4.2e-79 298.9 171 83.0
TPR.G19661 Trifolium pratense HOM05D005608 ORTHO05D007543 4.7e-78 295.4 167 82.6
Haze_27232 Corylus avellana HOM05D005608 ORTHO05D007543 1.4e-74 283.9 258 52.7
Haze_26706 Corylus avellana HOM05D005608 ORTHO05D007543 1.4e-69 267.3 276 48.2
MCO09G089 Micromonas commoda HOM05D000219 ORTHO05D000226 3.8e-64 249.2 275 47.6
PRCOL_00003320 Prasinoderma coloniale HOM05D000219 ORTHO05D000226 8.5e-64 248.1 285 47.0
Medtr0931s0010 Medicago truncatula HOM05D005608 ORTHO05D044358 8.0e-62 241.5 230 54.3
Medtr1g052165 Medicago truncatula HOM05D005608 ORTHO05D048895 8.0e-54 214.9 112 83.9
TPR.G23055 Trifolium pratense HOM05D005608 ORTHO05D048895 1.0e-45 188.0 103 79.6
Zm00001eb010250 Zea mays HOM05D005608 ORTHO05D007543 6.2e-22 109.0 77 70.1
Zm00001eb141600 Zea mays HOM05D005608 ORTHO05D007543 1.3e-16 91.3 77 58.4
SEGI_35043 Sequoiadendron giganteum HOM05D005608 ORTHO05D384886 4.7e-14 82.8 70 58.6
Pp3c1_10050 Physcomitrium patens HOM05D005608 ORTHO05D319324 2.2e-11 73.9 56 55.4
PSO765G0043 Papaver somniferum HOM05D005608 ORTHO05D302623 4.3e-07 59.7 48 62.5


User provided reference genes

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