Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 3.3e-71 271.6 133 100.0
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 4.6e-57 224.6 132 79.5
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 1.7e-54 216.1 132 75.0
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 2.8e-54 215.3 132 75.8
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 2.8e-54 215.3 132 78.0
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 6.3e-54 214.2 135 75.6
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 3.1e-53 211.8 132 76.5
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 4.1e-53 211.5 132 74.2
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 7.7e-52 207.2 134 75.4
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 2.9e-51 205.3 132 72.7
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 6.5e-51 204.1 132 71.2
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 5.5e-50 201.1 132 73.5
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 5.5e-50 201.1 128 75.0
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 1.2e-49 199.9 134 73.1
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 2.1e-49 199.1 138 70.3
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 2.7e-49 198.7 134 71.6
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 4.7e-49 198.0 138 70.3
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 4.7e-49 198.0 139 68.3
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 7.9e-49 197.2 133 70.7
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 7.9e-49 197.2 131 70.2
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 7.9e-49 197.2 128 72.7
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 1.4e-48 196.4 129 73.6
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 2.3e-48 195.7 141 68.8
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 5.1e-48 194.5 132 71.2
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 6.7e-48 194.1 138 69.6
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 8.8e-48 193.7 140 67.1
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 2.6e-47 192.2 133 69.2
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 1.3e-46 189.9 134 65.7
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 1.3e-46 189.9 140 67.1
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 1.3e-46 189.9 138 68.8
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 1.7e-46 189.5 133 71.4
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 2.2e-46 189.1 134 66.4
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 2.2e-46 189.1 134 66.4
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 2.2e-46 189.1 134 66.4
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 2.8e-46 188.7 135 64.4
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 3.7e-46 188.3 137 63.5
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 4.8e-46 188.0 128 71.1
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 4.8e-46 188.0 134 69.4
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 6.3e-46 187.6 134 64.2
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 8.2e-46 187.2 134 64.9
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 1.4e-45 186.4 132 68.9
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 1.8e-45 186.0 134 64.9
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 1.8e-45 186.0 134 64.9
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 1.8e-45 186.0 138 65.9
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 3.1e-45 185.3 132 65.2
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 3.1e-45 185.3 133 66.2
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 4.1e-45 184.9 135 64.4
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 4.1e-45 184.9 134 66.4
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 4.1e-45 184.9 139 67.6
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 2.0e-44 182.6 133 66.2
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 2.6e-44 182.2 138 63.0
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 2.6e-44 182.2 134 62.7
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 3.5e-44 181.8 170 58.2
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 3.5e-44 181.8 134 65.7
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 5.9e-44 181.0 133 65.4
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 7.7e-44 180.6 133 65.4
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 7.7e-44 180.6 136 63.2
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 1.7e-43 179.5 140 62.1
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 2.2e-43 179.1 134 67.2
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 2.9e-43 178.7 133 64.7
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 6.5e-43 177.6 135 66.7
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 6.5e-43 177.6 133 64.7
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 1.1e-42 176.8 107 79.4
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 1.9e-42 176.0 143 60.8
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 3.2e-42 175.3 139 63.3
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 3.2e-42 175.3 139 63.3
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 4.2e-42 174.9 140 65.7
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 1.2e-41 173.3 133 63.2
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 1.6e-41 172.9 143 60.8
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 1.6e-41 172.9 143 61.5
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 2.7e-41 172.2 139 61.2
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 6.1e-41 171.0 154 58.4
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 1.8e-40 169.5 138 62.3
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 6.7e-40 167.5 139 62.6
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 3.7e-38 161.8 135 58.5
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 1.1e-37 160.2 133 60.2
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 2.4e-37 159.1 132 62.1
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 3.1e-37 158.7 140 57.1
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 5.3e-37 157.9 133 59.4
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 1.1e-34 150.2 110 66.4
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 1.2e-33 146.7 95 72.6
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 4.7e-33 144.8 99 69.7
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 8.8e-32 140.6 118 58.5
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 1.2e-31 140.2 116 61.2
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 9.7e-31 137.1 99 67.7
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 1.7e-30 136.3 99 67.7
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 4.8e-30 134.8 134 51.5
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 4.8e-30 134.8 134 51.5
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 2.5e-26 122.5 133 54.1
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 2.3e-24 115.9 95 61.1
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 3.0e-24 115.5 98 60.2
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 9.8e-23 110.5 121 49.6
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 9.8e-23 110.5 149 45.6
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 2.2e-22 109.4 129 44.2
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 1.1e-21 107.1 94 59.6
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 2.4e-21 105.9 142 46.5
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 4.1e-21 105.1 140 41.4
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 2.9e-19 99.0 105 46.7
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 4.2e-18 95.1 80 56.2
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 4.7e-17 91.7 80 58.8
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 5.2e-16 88.2 101 46.5
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 6.8e-16 87.8 78 56.4
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 1.8e-13 79.7 103 46.6
Oeu000616.2 Olea europaea HOM05D007233 ORTHO05D009043 6.1e-09 64.7 72 50.0
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 1.0e-08 63.9 65 50.8
Potri.002G256001 Populus trichocarpa HOM05D007233 ORTHO05D009043 8.9e-08 60.8 40 75.0
Actinidia14340 Actinidia chinensis HOM05D007233 ORTHO05D009043 1.7e-06 56.6 56 53.6


User provided reference genes

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