Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.2e-241 839.3 407 100.0
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 1.8e-192 676.0 407 81.1
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 3.7e-190 668.3 407 80.3
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 4.1e-189 664.8 407 79.4
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 7.0e-189 664.1 407 80.3
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 1.2e-188 663.3 406 79.1
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 3.8e-187 658.3 407 78.1
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 2.3e-184 649.0 430 75.6
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 6.8e-184 647.5 407 78.9
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 6.8e-184 647.5 400 80.0
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 8.9e-184 647.1 407 78.9
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.5e-183 646.4 407 77.9
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 1.3e-182 643.3 407 78.1
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 1.7e-182 642.9 407 78.4
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 1.7e-182 642.9 407 77.1
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 2.9e-182 642.1 379 82.3
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 3.7e-182 641.7 407 77.4
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 1.4e-181 639.8 378 82.3
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 1.9e-181 639.4 407 76.9
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 3.2e-181 638.6 397 78.1
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 5.4e-181 637.9 408 76.7
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 7.0e-181 637.5 401 78.6
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 7.8e-180 634.0 397 78.1
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 1.3e-179 633.3 408 76.2
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 3.0e-179 632.1 407 75.9
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 5.0e-179 631.3 397 77.3
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 8.6e-179 630.6 407 74.9
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 1.1e-178 630.2 347 86.5
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 1.9e-178 629.4 380 80.0
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 5.6e-178 627.9 378 79.6
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 7.3e-178 627.5 366 82.5
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 9.5e-178 627.1 382 79.3
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 1.2e-177 626.7 378 80.7
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 1.2e-177 626.7 377 80.4
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 1.6e-177 626.3 347 86.7
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 1.1e-176 623.6 375 80.8
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 1.1e-176 623.6 347 85.3
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 1.4e-176 623.2 410 75.4
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 5.2e-176 621.3 353 83.9
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.2e-175 620.2 377 80.1
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 1.5e-175 619.8 378 79.1
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 1.5e-175 619.8 407 75.4
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 1.5e-175 619.8 408 75.0
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 2.6e-175 619.0 388 77.6
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 9.8e-175 617.1 390 77.9
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 1.3e-174 616.7 385 77.9
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 1.7e-174 616.3 362 81.5
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.1e-173 613.6 356 82.6
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 3.2e-173 612.1 345 84.6
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 5.4e-173 611.3 355 83.4
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 7.0e-173 610.9 345 84.1
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 7.0e-173 610.9 345 84.1
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 9.2e-173 610.5 412 73.5
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 9.2e-173 610.5 461 68.3
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 1.2e-172 610.1 397 75.6
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.2e-172 610.1 345 84.3
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 1.6e-172 609.8 367 79.3
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 3.5e-172 608.6 351 83.8
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 4.6e-172 608.2 375 80.3
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 1.3e-171 606.7 407 73.0
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 1.3e-171 606.7 407 74.2
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 1.7e-171 606.3 353 82.2
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 2.3e-171 605.9 380 78.2
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 2.3e-171 605.9 347 83.9
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 3.0e-171 605.5 381 78.2
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 3.9e-171 605.1 408 73.3
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 3.9e-171 605.1 345 83.8
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 6.6e-171 604.4 380 77.9
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 1.9e-170 602.8 372 78.8
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 2.5e-170 602.4 400 73.0
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 3.3e-170 602.1 407 72.5
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 5.6e-170 601.3 369 78.0
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 3.6e-169 598.6 382 76.4
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 3.6e-169 598.6 355 79.2
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 3.6e-169 598.6 356 80.6
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 8.1e-169 597.4 350 79.7
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 1.8e-168 596.3 352 81.0
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 5.2e-168 594.7 374 76.7
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 5.2e-168 594.7 407 70.8
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 8.9e-168 594.0 355 80.6
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 2.0e-167 592.8 365 79.2
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 2.0e-167 592.8 294 98.3
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 3.4e-167 592.0 374 76.5
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 1.3e-166 590.1 351 80.9
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 1.3e-166 590.1 349 80.8
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 1.7e-166 589.7 353 80.5
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 2.2e-166 589.3 327 85.6
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.9e-165 586.3 345 79.1
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 5.4e-165 584.7 345 79.7
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 6.6e-163 577.8 349 77.9
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 6.6e-163 577.8 332 81.6
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 2.5e-162 575.9 325 84.0
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 7.3e-162 574.3 332 80.4
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 8.1e-161 570.9 356 75.8
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 1.4e-160 570.1 376 73.7
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 4.0e-160 568.5 350 78.6
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 1.5e-159 566.6 368 74.7
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 1.2e-151 540.4 332 78.9
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 1.2e-151 540.4 329 79.0
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 1.1e-149 533.9 402 69.9
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 6.2e-145 518.1 335 72.5
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 4.0e-144 515.4 376 67.8
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 2.6e-143 512.7 399 66.9
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 3.8e-142 508.8 330 72.7
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.4e-141 506.9 330 71.5
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 4.6e-140 501.9 377 68.2
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 6.0e-140 501.5 378 67.2
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 2.4e-136 489.6 333 68.2
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 4.5e-127 458.8 407 59.7
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 1.2e-119 434.1 326 62.0
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 1.6e-116 423.7 376 58.0
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 2.8e-113 412.9 294 70.1
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 4.8e-113 412.1 260 76.9
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 2.2e-110 403.3 232 81.9
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 5.5e-109 398.7 224 83.0
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 3.6e-108 396.0 328 57.6
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 9.1e-104 381.3 327 58.7
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 7.0e-96 355.1 371 49.3
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 2.9e-70 270.0 287 47.0
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 4.7e-68 262.7 174 74.7
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 4.9e-65 252.7 192 66.1
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 5.2e-59 232.6 235 53.6
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 1.3e-49 201.4 169 62.7
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 3.7e-49 199.9 131 76.3
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 5.5e-16 89.7 59 78.0
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 3.9e-14 83.6 90 47.8
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 3.9e-14 83.6 90 47.8
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 2.6e-10 70.9 35 88.6


User provided reference genes

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