Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0648 Trochodendron aralioides HOM05D049058 ORTHO05D005167 1.5e-141 506.1 252 100.0
TAR369G0820 Trochodendron aralioides HOM05D049058 ORTHO05D005167 3.3e-72 275.8 136 99.3
TAR375G0027 Trochodendron aralioides HOM05D003893 ORTHO05D005167 2.4e-14 83.6 44 95.5
TAR374G0942 Trochodendron aralioides HOM05D000827 ORTHO05D001576 1.1e-11 74.7 54 72.2
DCAR_005586 Daucus carota HOM05D003893 ORTHO05D005167 1.4e-09 67.8 81 50.6
GSVIVG01003688001 Vitis vinifera HOM05D003893 ORTHO05D005167 2.3e-09 67.0 119 38.7
Prupe.5G055400 Prunus persica HOM05D003893 ORTHO05D005167 3.1e-09 66.6 125 37.6
MD04G1055600 Malus domestica HOM05D003893 ORTHO05D005167 4.0e-09 66.2 44 72.7
Manes.01G088800 Manihot esculenta HOM05D003893 ORTHO05D005167 4.0e-09 66.2 44 70.5
FAN08G3381 Fragaria x ananassa HOM05D003893 ORTHO05D005167 6.8e-09 65.5 87 46.0
FvH4_5g20370 Fragaria vesca HOM05D003893 ORTHO05D005167 8.9e-09 65.1 73 54.8
FAN18G3472 Fragaria x ananassa HOM05D003893 ORTHO05D005167 8.9e-09 65.1 73 54.8
Potri.001G150900 Populus trichocarpa HOM05D003893 ORTHO05D005167 8.9e-09 65.1 44 70.5
Ciclev10024446m.g Citrus clementina HOM05D003893 ORTHO05D005167 1.2e-08 64.7 62 56.5
QL12p008764 Quercus lobata HOM05D003893 ORTHO05D005167 1.5e-08 64.3 77 49.4
Atru.chr9.1207 Acer truncatum HOM05D003893 ORTHO05D005167 2.0e-08 63.9 42 76.2
Oeu054285.1 Olea europaea HOM05D003893 ORTHO05D005167 2.0e-08 63.9 87 50.6
Sabra01G0120900 Salix brachista HOM05D003893 ORTHO05D005167 2.0e-08 63.9 74 48.6
CANSAT21G1178 Cannabis sativa HOM05D003893 ORTHO05D005167 2.6e-08 63.5 42 71.4
Lj8C277G4 Lonicera japonica HOM05D003893 ORTHO05D005167 2.6e-08 63.5 43 69.8
PGR042G1290 Punica granatum HOM05D003893 ORTHO05D005167 3.4e-08 63.2 90 45.6
RcHm_v2.0_Chr7g0205631 Rosa chinensis HOM05D003893 ORTHO05D005167 4.4e-08 62.8 44 68.2
CAN.G572.10 Capsicum annuum HOM05D003893 ORTHO05D005167 2.2e-07 60.5 44 65.9
Gohir.A12G212800 Gossypium hirsutum HOM05D003893 ORTHO05D005167 3.7e-07 59.7 77 45.5
CiPaw.11G072600 Carya illinoinensis HOM05D003893 ORTHO05D005167 4.9e-07 59.3 44 68.2
Duzib205G1731 Durio zibethinus HOM05D003893 ORTHO05D005167 4.9e-07 59.3 42 69.0
Nitab4.5_0000500g0300 Nicotiana tabacum HOM05D003893 ORTHO05D005167 4.9e-07 59.3 44 65.9
Dinv25135 Davidia involucrata HOM05D003893 ORTHO05D005167 6.4e-07 58.9 44 70.5
Gohir.D12G215300 Gossypium hirsutum HOM05D003893 ORTHO05D005167 6.4e-07 58.9 71 46.5
CSS0002187 Camellia sinensis var. sinensis HOM05D003893 ORTHO05D005167 8.3e-07 58.5 44 72.7
COL.COLO4_07201 Corchorus olitorius HOM05D003893 ORTHO05D005167 1.1e-06 58.2 71 45.1
Gorai.008G230900 Gossypium raimondii HOM05D003893 ORTHO05D005167 1.9e-06 57.4 71 45.1
Cc08_g11340 Coffea canephora HOM05D003893 ORTHO05D005167 2.4e-06 57.0 44 65.9
Peaxi162Scf00301g00417 Petunia axillaris HOM05D003893 ORTHO05D005167 2.4e-06 57.0 80 41.2
Thecc.03G240200 Theobroma cacao HOM05D003893 ORTHO05D005167 2.4e-06 57.0 42 64.3
Rhsim11G0002100 Rhododendron simsii HOM05D003893 ORTHO05D005167 4.1e-06 56.2 44 65.9
vmacro17755 Vaccinium macrocarpon HOM05D003893 ORTHO05D005167 4.1e-06 56.2 64 54.7
Eucgr.E00353 Eucalyptus grandis HOM05D003893 ORTHO05D005167 7.1e-06 55.5 44 65.9
Solyc08g077850.2 Solanum lycopersicum HOM05D003893 ORTHO05D005167 7.1e-06 55.5 44 61.4
Sopen08g026360 Solanum pennellii HOM05D003893 ORTHO05D005167 7.1e-06 55.5 44 61.4


User provided reference genes

Program Settings