Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0553 Trochodendron aralioides HOM05D005060 ORTHO05D005975 2.7e-58 228.8 146 100.0
PSO339G2385 Papaver somniferum HOM05D005060 ORTHO05D005975 2.0e-29 132.9 148 64.9
PSO384G0259 Papaver somniferum HOM05D005060 ORTHO05D005975 6.5e-28 127.9 151 63.6
Nn7g37114 Nelumbo nucifera HOM05D005060 ORTHO05D005975 1.2e-26 123.6 144 69.4
Aqoxy1G00045 Aquilegia oxysepala HOM05D005060 ORTHO05D005975 6.1e-26 121.3 147 66.0
DCAR_009091 Daucus carota HOM05D005060 ORTHO05D005975 3.3e-24 115.5 149 65.1
MSTRG.6293 Avicennia marina HOM05D005060 ORTHO05D005975 4.4e-24 115.2 148 66.2
Oeu023007.1 Olea europaea HOM05D005060 ORTHO05D005975 2.2e-23 112.8 152 62.5
Peaxi162Scf00153g01321 Petunia axillaris HOM05D005060 ORTHO05D005975 4.1e-22 108.6 145 62.1
Solyc10g081100.3 Solanum lycopersicum HOM05D005060 ORTHO05D005975 9.1e-22 107.5 150 55.3
Migut.J01559 Erythranthe guttata HOM05D005060 ORTHO05D005975 1.2e-21 107.1 148 60.1
Nitab4.5_0000062g0300 Nicotiana tabacum HOM05D005060 ORTHO05D005975 1.2e-21 107.1 145 60.0
GSVIVG01025849001 Vitis vinifera HOM05D005060 ORTHO05D005975 1.2e-21 107.1 125 66.4
Nitab4.5_0003286g0020 Nicotiana tabacum HOM05D005060 ORTHO05D005975 3.4e-21 105.5 146 48.6
CAN.G128.101 Capsicum annuum HOM05D005060 ORTHO05D005975 4.5e-21 105.1 149 53.0
Sopen10g031600 Solanum pennellii HOM05D005060 ORTHO05D005975 4.5e-21 105.1 150 54.7
Ciclev10013047m.g Citrus clementina HOM05D005060 ORTHO05D005975 5.9e-21 104.8 144 59.0
Haze_20306 Corylus avellana HOM05D005060 ORTHO05D005975 5.9e-21 104.8 133 54.9
Rhsim04G0118500 Rhododendron simsii HOM05D005060 ORTHO05D005975 2.9e-20 102.4 150 46.7
PGSC0003DMG400028107 Solanum tuberosum HOM05D005060 ORTHO05D005975 3.8e-20 102.1 151 55.6
Hma1.2p1_0031F.1_g018400 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 5.0e-20 101.7 137 63.5
Hma1.2p1_2089F.1_g313840 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 5.0e-20 101.7 137 63.5
Potri.016G027600 Populus trichocarpa HOM05D005060 ORTHO05D005975 1.4e-19 100.1 148 48.0
Lj1C23T21 Lonicera japonica HOM05D005060 ORTHO05D005975 3.2e-19 99.0 120 54.2
ECA236G1981 Erigeron canadensis HOM05D005060 ORTHO05D005975 1.6e-18 96.7 149 59.1
Atru.chr1.1520 Acer truncatum HOM05D005060 ORTHO05D005975 2.1e-18 96.3 155 50.3
MBI19_g25016_MAGBIO Magnolia biondii HOM05D005060 ORTHO05D005975 1.0e-17 94.0 162 58.6
Sabra16G0032200 Salix brachista HOM05D005060 ORTHO05D005975 1.0e-17 94.0 148 46.6
Actinidia24546 Actinidia chinensis HOM05D005060 ORTHO05D005975 5.2e-17 91.7 128 64.1
vmacro08973 Vaccinium macrocarpon HOM05D005060 ORTHO05D005975 8.8e-17 90.9 144 43.8
Sabra16G0031900 Salix brachista HOM05D005060 ORTHO05D005975 1.1e-16 90.5 119 52.1
Cc06_g22810 Coffea canephora HOM05D005060 ORTHO05D005975 1.5e-16 90.1 157 55.4
TWI74G0004 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 1.5e-16 90.1 147 56.5
Cfa019938 Carpinus fangiana HOM05D005060 ORTHO05D005975 4.4e-16 88.6 116 54.3
SGA_v2.0_scaffold66G22311 Striga asiatica HOM05D005060 ORTHO05D005975 7.4e-16 87.8 147 46.9
TWI53G1989 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 9.7e-16 87.4 149 51.7
Cpa.g.sc33.199 Carica papaya HOM05D005060 ORTHO05D005975 1.7e-15 86.7 150 52.7
PGR042G1122 Punica granatum HOM05D005060 ORTHO05D005975 1.7e-15 86.7 141 51.1
Eucgr.A02181 Eucalyptus grandis HOM05D005060 ORTHO05D005975 4.8e-15 85.1 146 54.1
ClCG04G005980 Citrullus lanatus HOM05D005060 ORTHO05D005975 1.1e-14 84.0 142 40.8
SGA_v2.0_scaffold69G23194 Striga asiatica HOM05D005060 ORTHO05D005975 7.0e-14 81.3 103 65.0
MD07G1060800 Malus domestica HOM05D005060 ORTHO05D005975 1.6e-13 80.1 121 46.3
MELO3C019148.2 Cucumis melo HOM05D005060 ORTHO05D005975 2.0e-13 79.7 125 40.0
CsaV3_4G029150 Cucumis sativus L. HOM05D005060 ORTHO05D005975 2.0e-13 79.7 154 39.0
Sopen10g028770 Solanum pennellii HOM05D005060 ORTHO05D005975 2.0e-13 79.7 147 56.5
Ca_08351_v3 Cicer arietinum L. HOM05D005060 ORTHO05D005975 3.5e-13 79.0 149 42.3
Solyc10g077090.2 Solanum lycopersicum HOM05D005060 ORTHO05D005975 4.5e-13 78.6 147 56.5
Cpa.g.sc33.198 Carica papaya HOM05D005060 ORTHO05D005975 7.7e-13 77.8 147 55.1
ATR0787G086 Amborella trichopoda HOM05D005060 ORTHO05D005975 1.3e-12 77.0 151 55.0
CAN.G959.26 Capsicum annuum HOM05D005060 ORTHO05D005975 1.3e-12 77.0 149 53.7
CSS0016899 Camellia sinensis var. sinensis HOM05D005060 ORTHO05D005975 2.2e-12 76.3 142 52.8
Manes.13G072000 Manihot esculenta HOM05D005060 ORTHO05D005975 2.9e-12 75.9 150 50.7
CDE02G1443 Ceratophyllum demersum HOM05D005060 ORTHO05D005975 3.8e-12 75.5 145 60.0
Sc13g0000780 Simmondsia chinensis HOM05D005060 ORTHO05D005975 3.8e-12 75.5 117 52.1
PGSC0003DMG400007184 Solanum tuberosum HOM05D005060 ORTHO05D005975 3.8e-12 75.5 127 59.1
MD02G1260500 Malus domestica HOM05D005060 ORTHO05D005975 6.5e-12 74.7 160 46.2
Nitab4.5_0001270g0130 Nicotiana tabacum HOM05D005060 ORTHO05D005975 8.5e-12 74.3 108 65.7
Gohir.A01G192800 Gossypium hirsutum HOM05D005060 ORTHO05D005975 1.5e-11 73.6 149 45.6
Lj1g0025022 Lotus japonicus HOM05D005060 ORTHO05D005975 1.9e-11 73.2 138 41.3
Hund24512 Selenicereus undatus HOM05D005060 ORTHO05D005975 1.9e-11 73.2 148 56.1
RcHm_v2.0_Chr1g0331611 Rosa chinensis HOM05D005060 ORTHO05D005975 2.5e-11 72.8 148 43.9
Duzib128G1851 Durio zibethinus HOM05D005060 ORTHO05D005975 3.2e-11 72.4 149 55.0
Gohir.D01G177000 Gossypium hirsutum HOM05D005060 ORTHO05D005975 3.2e-11 72.4 149 45.6
Gorai.002G226200 Gossypium raimondii HOM05D005060 ORTHO05D005975 3.2e-11 72.4 149 45.6
Sed0011991 Sechium edule HOM05D005060 ORTHO05D005975 5.5e-11 71.6 145 42.1
Lalb_Chr24g0400621 Lupinus albus HOM05D005060 ORTHO05D005975 9.4e-11 70.9 146 40.4
Prupe.2G065900 Prunus persica HOM05D005060 ORTHO05D005975 2.1e-10 69.7 145 46.2
Ciclev10013042m.g Citrus clementina HOM05D005060 ORTHO05D005975 2.7e-10 69.3 153 54.2
FAN01G1650 Fragaria x ananassa HOM05D005060 ORTHO05D005975 2.7e-10 69.3 146 41.1
AUR62020993 Chenopodium quinoa HOM05D005060 ORTHO05D005975 3.6e-10 68.9 116 56.9
VMungo1383G0657 Vigna mungo HOM05D005060 ORTHO05D005975 4.7e-10 68.6 146 43.2
Lalb_Chr22g0358011 Lupinus albus HOM05D005060 ORTHO05D005975 6.1e-10 68.2 160 36.9
CANSAT78G0005 Cannabis sativa HOM05D005060 ORTHO05D005975 1.4e-09 67.0 146 51.4
Gohir.A13G001200 Gossypium hirsutum HOM05D005060 ORTHO05D005975 1.4e-09 67.0 149 40.3
Medtr7g088520 Medicago truncatula HOM05D005060 ORTHO05D005975 1.8e-09 66.6 145 40.7
Thecc.05G132800 Theobroma cacao HOM05D005060 ORTHO05D005975 1.8e-09 66.6 151 43.7
FAN10G4368 Fragaria x ananassa HOM05D002241 ORTHO05D002458 2.3e-09 66.2 145 40.0
TWI74G0567 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 2.3e-09 66.2 145 52.4
CDE04G0407 Ceratophyllum demersum HOM05D005060 ORTHO05D005975 3.0e-09 65.9 145 55.9
Phvul.001G116500 Phaseolus vulgaris HOM05D005060 ORTHO05D005975 3.0e-09 65.9 148 42.6
Duzib093G0151 Durio zibethinus HOM05D005060 ORTHO05D005975 4.0e-09 65.5 148 41.2
Manes.08G066600 Manihot esculenta HOM05D005060 ORTHO05D005975 4.0e-09 65.5 150 42.7
Ah.13g077380 Amaranthus hybridus HOM05D005060 ORTHO05D005975 5.2e-09 65.1 147 44.9
FAN03G0591 Fragaria x ananassa HOM05D005060 ORTHO05D005975 8.8e-09 64.3 151 39.1
TPR.G27972 Trifolium pratense HOM05D005060 ORTHO05D005975 8.8e-09 64.3 150 40.0
HanXRQChr05g0130501 Helianthus annuus HOM05D005060 ORTHO05D005975 1.2e-08 63.9 154 41.6
Lsat_1_v5_gn_8_109400 Lactuca sativa HOM05D005060 ORTHO05D005975 1.2e-08 63.9 151 38.4
Ah.04g150220 Amaranthus hybridus HOM05D005060 ORTHO05D005975 1.5e-08 63.5 100 54.0
FvH4_7g05170 Fragaria vesca HOM05D005060 ORTHO05D005975 5.7e-08 61.6 149 39.6
FAN06G0894 Fragaria x ananassa HOM05D005060 ORTHO05D005975 5.7e-08 61.6 149 39.6
Psat0s2745g0280 Pisum sativum HOM05D005060 ORTHO05D005975 5.7e-08 61.6 149 36.2
unitig_21.g20673 Utricularia gibba HOM05D005060 ORTHO05D005975 5.7e-08 61.6 147 40.8
EL10Ac3g07347 Beta vulgaris HOM05D005060 ORTHO05D005975 9.7e-08 60.8 98 55.1
Dinv10816 Davidia involucrata HOM05D005060 ORTHO05D005975 9.7e-08 60.8 87 50.6
Lalb_Chr14g0365381 Lupinus albus HOM05D005060 ORTHO05D005975 9.7e-08 60.8 147 38.1
CiPaw.10G123900 Carya illinoinensis HOM05D005060 ORTHO05D005975 1.7e-07 60.1 97 61.9
FAN06G1820 Fragaria x ananassa HOM05D002241 ORTHO05D002458 1.7e-07 60.1 115 41.7
Atru.chr1.1518 Acer truncatum HOM05D005060 ORTHO05D005975 2.2e-07 59.7 148 53.4
QL07p014521 Quercus lobata HOM05D005060 ORTHO05D005975 2.8e-07 59.3 123 55.3
Potri.006G029500 Populus trichocarpa HOM05D005060 ORTHO05D005975 3.7e-07 58.9 148 35.8
Lj1E24T1 Lonicera japonica HOM05D005060 ORTHO05D005975 6.3e-07 58.2 93 43.0
Potri.006G028500 Populus trichocarpa HOM05D005060 ORTHO05D005975 6.3e-07 58.2 148 43.2
Glyma.19G124900 Glycine max HOM05D005060 ORTHO05D005975 1.1e-06 57.4 135 40.7
SGA_v2.0_scaffold104G30067 Striga asiatica HOM05D005060 ORTHO05D005975 1.8e-06 56.6 73 43.8
HPP92_011277 Vanilla planifolia HOM05D065872 ORTHO05D005975 1.8e-06 56.6 172 45.9
Os01g0278900 Oryza sativa ssp. japonica HOM05D005060 ORTHO05D005975 4.1e-06 55.5 144 31.9
HPP92_011298 Vanilla planifolia HOM05D065872 ORTHO05D005975 7.0e-06 54.7 172 44.8


User provided reference genes

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