Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0540 Trochodendron aralioides HOM05D009020 ORTHO05D010722 1.0e-99 366.7 177 100.0
TAR299G0004 Trochodendron aralioides HOM05D009020 ORTHO05D010722 1.2e-79 300.1 151 93.4
TAR369G0756 Trochodendron aralioides HOM05D009020 ORTHO05D010722 6.2e-57 224.6 146 74.0
TAR299G0003 Trochodendron aralioides HOM05D009020 ORTHO05D010722 2.1e-41 172.9 143 62.9
TAR299G0005 Trochodendron aralioides HOM05D009020 ORTHO05D010722 4.8e-41 171.8 140 62.9
TAR369G0090 Trochodendron aralioides HOM05D009020 ORTHO05D010722 1.1e-40 170.6 141 63.1
TAR299G0002 Trochodendron aralioides HOM05D009020 ORTHO05D010722 1.2e-39 167.2 143 61.5
TAR369G0652 Trochodendron aralioides HOM05D009020 ORTHO05D010722 7.6e-39 164.5 140 62.1
TAR369G0894 Trochodendron aralioides HOM05D000140 ORTHO05D016445 7.1e-21 104.8 85 64.7
Dinv20958 Davidia involucrata HOM05D002301 ORTHO05D002316 1.0e-14 84.3 145 37.2
Dinv20985 Davidia involucrata HOM05D002301 ORTHO05D002316 1.0e-14 84.3 145 37.2
Sabra06G0137800 Salix brachista HOM05D003560 ORTHO05D004500 2.2e-14 83.2 136 39.0
Cfa007825 Carpinus fangiana HOM05D009020 ORTHO05D010722 1.1e-13 80.9 144 36.1
Haze_14243 Corylus avellana HOM05D009020 ORTHO05D010722 1.1e-13 80.9 144 35.4
Haze_14246 Corylus avellana HOM05D009020 ORTHO05D010722 1.1e-13 80.9 144 35.4
Potri.006G180700 Populus trichocarpa HOM05D009020 ORTHO05D010722 1.1e-13 80.9 141 36.2
Manes.14G113400 Manihot esculenta HOM05D009020 ORTHO05D010722 2.5e-13 79.7 142 37.3
Medtr3g070160 Medicago truncatula HOM05D009020 ORTHO05D010722 3.2e-13 79.3 137 35.0
QL02p057804 Quercus lobata HOM05D009020 ORTHO05D010722 4.2e-13 79.0 145 33.1
TPR.G16305 Trifolium pratense HOM05D009020 ORTHO05D010722 2.1e-12 76.6 139 32.4
Lj1g0016360 Lotus japonicus HOM05D009020 ORTHO05D010722 3.5e-12 75.9 151 33.1
Sabra18G0088500 Salix brachista HOM05D009020 ORTHO05D010722 1.3e-11 73.9 140 35.0
Thecc.10G025900 Theobroma cacao HOM05D021924 ORTHO05D010722 1.8e-11 73.6 137 35.0
Lalb_Chr07g0188651 Lupinus albus HOM05D009020 ORTHO05D010722 6.7e-11 71.6 127 36.2
Manes.10G017300 Manihot esculenta HOM05D009020 ORTHO05D010722 1.1e-10 70.9 141 31.2
Potri.018G102900 Populus trichocarpa HOM05D009020 ORTHO05D010722 1.1e-10 70.9 140 34.3
Prupe.2G246500 Prunus persica HOM05D009020 ORTHO05D010722 1.5e-10 70.5 140 37.1
Lalb_Chr07g0188631 Lupinus albus HOM05D009020 ORTHO05D010722 2.5e-10 69.7 132 33.3
TAR623G1244 Trochodendron aralioides HOM05D009020 ORTHO05D010722 9.7e-10 67.8 91 45.1
Psat5g127160 Pisum sativum HOM05D009020 ORTHO05D010722 2.2e-09 66.6 157 28.0
Actinidia29679 Actinidia chinensis HOM05D009020 ORTHO05D010722 6.3e-09 65.1 102 36.3
Atru.chr12.238 Acer truncatum HOM05D009020 ORTHO05D010722 8.2e-09 64.7 144 29.9
COL.COLO4_25656 Corchorus olitorius HOM05D021924 ORTHO05D010722 2.4e-08 63.2 134 32.1
Aqoxy4G02655 Aquilegia oxysepala HOM05D009020 ORTHO05D010722 3.1e-08 62.8 84 42.9
Haze_17186 Corylus avellana HOM05D002301 ORTHO05D002316 1.2e-07 60.8 123 33.3
Medtr2g021200 Medicago truncatula HOM05D009020 ORTHO05D010722 1.2e-07 60.8 107 33.6
Peaxi162Scf00951g00037 Petunia axillaris HOM05D014753 ORTHO05D016888 1.5e-07 60.5 118 33.9
Rhsim03G0140500 Rhododendron simsii HOM05D009020 ORTHO05D010722 3.4e-07 59.3 139 30.9
arahy.Tifrunner.gnm1.ann1.V1A3WV Arachis hypogaea HOM05D009020 ORTHO05D010722 5.9e-07 58.5 112 31.2
Gohir.A08G218200 Gossypium hirsutum HOM05D021924 ORTHO05D010722 1.7e-06 57.0 133 34.6
PGSC0003DMG400034571 Solanum tuberosum HOM05D014753 ORTHO05D016888 1.7e-06 57.0 146 30.1
Gohir.D08G235401 Gossypium hirsutum HOM05D021924 ORTHO05D010722 2.9e-06 56.2 133 34.6
Gorai.004G250000 Gossypium raimondii HOM05D021924 ORTHO05D010722 2.9e-06 56.2 133 34.6
arahy.Tifrunner.gnm1.ann1.TW3CAC Arachis hypogaea HOM05D009020 ORTHO05D010722 5.0e-06 55.5 112 31.2
Solyc08g062170.1 Solanum lycopersicum HOM05D014753 ORTHO05D016888 5.0e-06 55.5 102 33.3
THA.LOC104810075 Tarenaya hassleriana HOM05D009750 ORTHO05D011861 8.5e-06 54.7 83 38.6


User provided reference genes

Program Settings