Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 0.0e+00 1315.1 700 100.0
Nn2g11386 Nelumbo nucifera HOM05D004806 ORTHO05D005397 6.5e-227 791.2 724 64.8
Nn2g13619 Nelumbo nucifera HOM05D004806 ORTHO05D005397 6.8e-224 781.2 723 64.2
Dinv34423 Davidia involucrata HOM05D004806 ORTHO05D005397 4.9e-206 721.8 717 61.8
Dinv20955 Davidia involucrata HOM05D004806 ORTHO05D005397 3.6e-201 705.7 717 60.9
Dinv20988 Davidia involucrata HOM05D004806 ORTHO05D005397 3.6e-201 705.7 717 60.9
CSS0019944 Camellia sinensis var. sinensis HOM05D004806 ORTHO05D005397 3.1e-200 702.6 715 60.1
MBI14_g36885_MAGBIO Magnolia biondii HOM05D004806 ORTHO05D005397 4.0e-200 702.2 723 59.9
Prupe.2G246100 Prunus persica HOM05D004806 ORTHO05D005397 1.5e-194 683.7 709 58.0
RcHm_v2.0_Chr1g0369401 Rosa chinensis HOM05D004806 ORTHO05D005397 2.8e-193 679.5 721 56.9
MD01G1147200 Malus domestica HOM05D004806 ORTHO05D005397 3.1e-192 676.0 711 57.8
Actinidia33944 Actinidia chinensis HOM05D004806 ORTHO05D005397 1.2e-191 674.1 712 58.4
QL08p062653 Quercus lobata HOM05D004806 ORTHO05D005397 9.9e-191 671.0 750 55.2
Thecc.10G026200 Theobroma cacao HOM05D004806 ORTHO05D005397 1.3e-190 670.6 713 58.5
Lj1C950G18 Lonicera japonica HOM05D004806 ORTHO05D005397 1.6e-188 663.7 742 54.4
FAN03G1683 Fragaria x ananassa HOM05D004806 ORTHO05D005397 4.3e-186 655.6 663 58.2
Duzib114G0963 Durio zibethinus HOM05D004806 ORTHO05D005397 6.2e-185 651.7 723 56.3
FvH4_7g24020 Fragaria vesca HOM05D004806 ORTHO05D005397 1.4e-184 650.6 665 58.0
Gorai.010G199100 Gossypium raimondii HOM05D004806 ORTHO05D005397 1.2e-183 647.5 665 59.8
FAN06G0754 Fragaria x ananassa HOM05D004806 ORTHO05D005397 3.4e-183 646.0 727 54.7
TWI53G0900 Tripterygium wilfordii HOM05D004806 ORTHO05D005397 5.8e-183 645.2 690 58.1
Aqoxy4G02663 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 8.4e-182 641.3 724 56.5
Duzib106G0751 Durio zibethinus HOM05D004806 ORTHO05D005397 1.1e-181 641.0 651 59.1
FAN10G3438 Fragaria x ananassa HOM05D004806 ORTHO05D005397 1.1e-181 641.0 726 54.5
Potri.010G192800 Populus trichocarpa HOM05D004806 ORTHO05D005397 1.1e-181 641.0 666 59.0
Gohir.D06G170100 Gossypium hirsutum HOM05D004806 ORTHO05D005397 5.4e-181 638.6 701 57.6
Atru.chr12.242 Acer truncatum HOM05D004806 ORTHO05D005397 3.5e-180 636.0 712 55.8
Gohir.A06G164600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.0e-179 634.4 671 58.7
CiPaw.01G295700 Carya illinoinensis HOM05D004806 ORTHO05D005397 5.1e-179 632.1 712 54.8
Gorai.011G280200 Gossypium raimondii HOM05D004806 ORTHO05D005397 5.1e-179 632.1 710 55.8
Ciclev10030877m.g Citrus clementina HOM05D004806 ORTHO05D005397 5.6e-178 628.6 690 57.4
Gohir.D10G243800 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.3e-177 627.5 710 55.4
Manes.10G017800 Manihot esculenta HOM05D004806 ORTHO05D005397 3.6e-177 625.9 715 55.8
Gohir.A10G229600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 4.8e-177 625.5 713 55.5
Potri.008G064500 Populus trichocarpa HOM05D004806 ORTHO05D005397 6.2e-177 625.2 715 56.2
FAN01G2868 Fragaria x ananassa HOM05D004806 ORTHO05D005397 9.0e-176 621.3 715 53.4
vmacro06995 Vaccinium macrocarpon HOM05D004806 ORTHO05D005397 6.4e-174 615.1 651 59.6
CiPaw.02G189800 Carya illinoinensis HOM05D004806 ORTHO05D005397 3.3e-170 602.8 709 53.3
COL.COLO4_25659 Corchorus olitorius HOM05D004806 ORTHO05D005397 2.8e-169 599.7 717 54.4
AUR62022839 Chenopodium quinoa HOM05D004806 ORTHO05D005397 2.4e-168 596.7 677 54.2
Actinidia29677 Actinidia chinensis HOM05D004806 ORTHO05D005397 9.0e-168 594.7 707 54.0
Cc02_g06920 Coffea canephora HOM05D004806 ORTHO05D005397 2.0e-167 593.6 657 55.9
Hund13832 Selenicereus undatus HOM05D004806 ORTHO05D005397 5.8e-167 592.0 663 55.1
MELO3C008275.2 Cucumis melo HOM05D004806 ORTHO05D005397 3.8e-166 589.3 709 53.0
Sed0002029 Sechium edule HOM05D004806 ORTHO05D005397 3.8e-166 589.3 715 52.6
AUR62012206 Chenopodium quinoa HOM05D004806 ORTHO05D005397 8.4e-166 588.2 677 54.4
Sabra08G0047400 Salix brachista HOM05D004806 ORTHO05D005397 1.9e-165 587.0 696 54.2
DCAR_027553 Daucus carota HOM05D004806 ORTHO05D005397 6.0e-164 582.0 692 53.9
Peaxi162Scf00401g00118 Petunia axillaris HOM05D004806 ORTHO05D005397 1.0e-163 581.3 646 55.6
Nitab4.5_0000737g0020 Nicotiana tabacum HOM05D004806 ORTHO05D005397 1.5e-162 577.4 658 53.6
Eucgr.G03032 Eucalyptus grandis HOM05D004806 ORTHO05D005397 3.7e-161 572.8 614 56.0
Glyma.14G062000 Glycine max HOM05D004806 ORTHO05D005397 3.4e-159 566.2 677 53.3
Hund15980 Selenicereus undatus HOM05D004806 ORTHO05D005397 5.8e-159 565.5 675 52.9
Ca_05931_v3 Cicer arietinum L. HOM05D004806 ORTHO05D005397 1.9e-157 560.5 707 52.5
Nitab4.5_0003720g0010 Nicotiana tabacum HOM05D004806 ORTHO05D005397 1.9e-157 560.5 708 50.4
PGR142G0174 Punica granatum HOM05D004806 ORTHO05D005397 5.5e-157 558.9 656 55.8
VMungo0647G1582 Vigna mungo HOM05D004806 ORTHO05D005397 1.3e-155 554.3 706 51.3
Ah.10g036410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 3.0e-155 553.1 717 50.6
Phvul.008G226400 Phaseolus vulgaris HOM05D004806 ORTHO05D005397 3.9e-155 552.7 682 52.8
Haze_17182 Corylus avellana HOM05D004806 ORTHO05D005397 1.1e-154 551.2 558 59.7
SalBow6G1361 Salvia bowleyana HOM05D004806 ORTHO05D005397 1.3e-153 547.7 727 50.5
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea HOM05D004806 ORTHO05D005397 2.8e-153 546.6 679 51.7
SalBow6G1823 Salvia bowleyana HOM05D004806 ORTHO05D005397 2.8e-153 546.6 727 50.2
Medtr5g081880 Medicago truncatula HOM05D004806 ORTHO05D005397 4.8e-153 545.8 668 51.6
PSO801G0450 Papaver somniferum HOM05D004806 ORTHO05D005397 1.8e-152 543.9 723 52.3
Psat2g035600 Pisum sativum HOM05D004806 ORTHO05D005397 1.9e-149 533.9 678 51.9
EL10Ac2g04786 Beta vulgaris HOM05D004806 ORTHO05D005397 7.2e-149 531.9 783 46.2
Migut.F01427 Erythranthe guttata HOM05D004806 ORTHO05D005397 1.6e-148 530.8 702 50.3
TPR.G8038 Trifolium pratense HOM05D004806 ORTHO05D005397 1.6e-148 530.8 724 49.0
PSO339G2633 Papaver somniferum HOM05D004806 ORTHO05D005397 3.9e-147 526.2 755 50.1
Sc11g0007270 Simmondsia chinensis HOM05D004806 ORTHO05D005397 8.7e-147 525.0 690 49.4
ECA238G2978 Erigeron canadensis HOM05D004806 ORTHO05D005397 4.8e-145 519.2 668 49.7
Ah.16g103100 Amaranthus hybridus HOM05D004806 ORTHO05D005397 1.8e-144 517.3 695 49.9
HanXRQChr14g0459971 Helianthus annuus HOM05D004806 ORTHO05D005397 5.3e-144 515.8 694 48.8
PGSC0003DMG400027178 Solanum tuberosum HOM05D004806 ORTHO05D005397 6.9e-144 515.4 619 53.3
Lalb_Chr04g0250791 Lupinus albus HOM05D004806 ORTHO05D005397 9.1e-144 515.0 713 49.6
THA.LOC104824306 Tarenaya hassleriana HOM05D004806 ORTHO05D005397 7.7e-143 511.9 672 51.3
Sopen05g031160 Solanum pennellii HOM05D004806 ORTHO05D005397 1.0e-142 511.5 650 50.9
Nitab4.5_0004338g0050 Nicotiana tabacum HOM05D004806 ORTHO05D005397 1.7e-142 510.8 641 50.5
Solyc05g052630.4 Solanum lycopersicum HOM05D004806 ORTHO05D005397 2.9e-142 510.0 619 52.5
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea HOM05D004806 ORTHO05D005397 7.9e-140 501.9 624 51.6
CsaV3_6G001640 Cucumis sativus L. HOM05D004806 ORTHO05D005397 3.3e-138 496.5 570 55.1
ClCG11G006350 Citrullus lanatus HOM05D004806 ORTHO05D005397 2.4e-136 490.3 574 54.9
LjContig00357g0026481 Lotus japonicus HOM05D004806 ORTHO05D005397 1.5e-135 487.6 645 50.4
Lsat_1_v5_gn_2_121900 Lactuca sativa HOM05D004806 ORTHO05D005397 2.9e-134 483.4 694 47.7
Nitab4.5_0002100g0120 Nicotiana tabacum HOM05D004806 ORTHO05D005397 5.0e-134 482.6 655 48.1
TAR623G1028 Trochodendron aralioides HOM05D004806 ORTHO05D005397 3.6e-132 476.5 605 53.4
CDE02G2339 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 3.9e-131 473.0 642 47.8
Oeu055830.1 Olea europaea HOM05D004806 ORTHO05D005397 3.9e-131 473.0 715 46.4
Aa31LG5G19660 Aethionema arabicum HOM05D004806 ORTHO05D005397 2.6e-130 470.3 697 45.9
Aqoxy2G00978 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 4.4e-130 469.5 599 52.4
HPP92_018194 Vanilla planifolia HOM05D004806 ORTHO05D005397 1.4e-123 448.0 552 51.3
unitig_52.g16836 Utricularia gibba HOM05D004806 ORTHO05D005397 7.5e-122 442.2 654 46.5
Carub.0004s2208 Capsella rubella HOM05D004806 ORTHO05D005397 3.2e-117 426.8 601 48.4
Oeu036630.1 Olea europaea HOM05D004806 ORTHO05D005397 8.8e-115 418.7 539 50.3
Zm00001eb297980 Zea mays HOM05D004806 ORTHO05D005397 4.5e-111 406.4 626 45.7
HanXRQChr07g0200671 Helianthus annuus HOM05D004806 ORTHO05D005397 6.5e-110 402.5 679 43.6
AT2G39950 Arabidopsis thaliana HOM05D004806 ORTHO05D005397 1.1e-109 401.7 641 45.6
HanXRQChr08g0222261 Helianthus annuus HOM05D004806 ORTHO05D005397 5.5e-109 399.4 590 45.9
Thhalv10017559m.g Eutrema salsugineum HOM05D004806 ORTHO05D005397 7.2e-109 399.1 607 46.1
AL4G37530 Arabidopsis lyrata HOM05D004806 ORTHO05D005397 1.6e-108 397.9 617 45.2
Sp4g22260 Schrenkiella parvula HOM05D004806 ORTHO05D005397 4.0e-107 393.3 690 42.6
Sed0010788 Sechium edule HOM05D004806 ORTHO05D005397 1.3e-105 388.3 536 50.4
Rhsim03G0140100 Rhododendron simsii HOM05D004806 ORTHO05D005397 2.8e-105 387.1 591 46.4
C04p07550 Brassica napus HOM05D004806 ORTHO05D005397 2.3e-102 377.5 592 44.6
BolC4t22372H Brassica oleracea HOM05D004806 ORTHO05D005397 2.3e-102 377.5 592 44.6
BraA05t19615Z Brassica rapa HOM05D004806 ORTHO05D005397 4.3e-101 373.2 592 43.8
Glyma.02G254400 Glycine max HOM05D004806 ORTHO05D005397 5.6e-101 372.9 507 50.7
SGA_v2.0_scaffold76G25081 Striga asiatica HOM05D004806 ORTHO05D005397 5.6e-101 372.9 774 40.6
Manes.07G125400 Manihot esculenta HOM05D004806 ORTHO05D005397 6.8e-99 365.9 457 54.9
SGA_v2.0_scaffold343G49443 Striga asiatica HOM05D004806 ORTHO05D005397 6.4e-97 359.4 614 44.3
Lsat_1_v5_gn_8_12421 Lactuca sativa HOM05D004806 ORTHO05D005397 3.1e-91 340.5 653 41.3
Sc11g0006990 Simmondsia chinensis HOM05D004806 ORTHO05D005397 1.9e-88 331.3 302 61.3
GSVIVG01016366001 Vitis vinifera HOM05D004806 ORTHO05D005397 1.4e-83 315.1 189 83.1
ATR0618G022 Amborella trichopoda HOM05D004806 ORTHO05D005397 2.1e-76 291.2 263 60.8
Lalb_Chr17g0346601 Lupinus albus HOM05D004806 ORTHO05D005397 3.8e-73 280.4 505 42.2
CARHR134870 Cardamine hirsuta HOM05D004806 ORTHO05D005397 2.7e-71 274.2 507 41.8
CDE09G0712 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 3.5e-63 247.3 211 60.7
AagrBONN_evm.TU.Sc2ySwM_368.289 Anthoceros agrestis HOM05D004806 ORTHO05D005397 4.8e-52 210.3 236 49.6
Mapoly0096s0071 Marchantia polymorpha HOM05D004806 ORTHO05D005397 5.5e-48 196.8 514 35.6
CDE09G1248 Ceratophyllum demersum HOM05D000530 ORTHO05D003341 1.1e-45 189.1 246 50.4
RcHm_v2.0_Chr1g0369361 Rosa chinensis HOM05D004806 ORTHO05D005397 1.6e-44 185.3 204 56.9
SHI03525 Sapria himalayana HOM05D004806 ORTHO05D005397 4.5e-42 177.2 448 33.9
CBR_g37391 Chara braunii HOM05D004806 ORTHO05D005397 1.6e-39 168.7 392 35.2
MD07G1214200 Malus domestica HOM05D004806 ORTHO05D005397 7.9e-39 166.4 118 70.3
Sabra10G0148400 Salix brachista HOM05D004806 ORTHO05D005397 5.1e-38 163.7 162 58.0
Oeu059753.1 Olea europaea HOM05D004806 ORTHO05D005397 4.3e-37 160.6 120 68.3
TPR.G40368 Trifolium pratense HOM05D004806 ORTHO05D005397 7.6e-34 149.8 140 60.7
SMO358G0301 Selaginella moellendorffii HOM05D004806 ORTHO05D005397 2.2e-33 148.3 446 33.0
Oeu022381.1 Olea europaea HOM05D004806 ORTHO05D005397 1.1e-32 146.0 133 60.2
Lalb_Chr17g0346611 Lupinus albus HOM05D004806 ORTHO05D005397 9.3e-32 142.9 121 61.2
BcaB02g09066 Brassica carinata HOM05D004806 ORTHO05D005397 1.1e-29 136.0 229 41.0
A05p06470 Brassica napus HOM05D004806 ORTHO05D005397 9.7e-29 132.9 93 71.0
ATR0618G087 Amborella trichopoda HOM05D004806 ORTHO05D005397 3.4e-26 124.4 188 45.7
SHI03526 Sapria himalayana HOM05D004806 ORTHO05D005397 1.0e-25 122.9 155 45.2
Os07g0100500 Oryza sativa ssp. japonica HOM05D004806 ORTHO05D005397 2.0e-21 108.6 74 68.9
AagrBONN_evm.TU.Sc2ySwM_369.624 Anthoceros agrestis HOM05D004806 ORTHO05D005397 9.7e-21 106.3 447 30.4
ATR0723G011 Amborella trichopoda HOM05D004806 ORTHO05D005397 9.1e-19 99.8 72 66.7
Zm00001eb057510 Zea mays HOM05D004806 ORTHO05D005397 1.4e-16 92.4 73 63.0
Haze_17183 Corylus avellana HOM05D004806 ORTHO05D005397 1.9e-16 92.0 149 40.3
SalBow6G4818 Salvia bowleyana HOM05D004806 ORTHO05D005397 6.1e-15 87.0 153 43.1
RcHm_v2.0_Chr1g0313541 Rosa chinensis HOM05D004806 ORTHO05D005397 4.8e-12 77.4 62 64.5
Pp3c26_8620 Physcomitrium patens HOM05D004806 ORTHO05D005397 1.4e-11 75.9 123 35.0
Oeu043075.1 Olea europaea HOM05D004806 ORTHO05D005397 2.4e-11 75.1 87 54.0
CAN.G853.43 Capsicum annuum HOM05D004806 ORTHO05D005397 5.3e-11 73.9 62 64.5
Oeu059752.1 Olea europaea HOM05D004806 ORTHO05D005397 4.2e-08 64.3 127 39.4
Oeu021121.1 Olea europaea HOM05D004806 ORTHO05D005397 1.6e-07 62.4 40 72.5
MBI19_g13733_MAGBIO Magnolia biondii HOM05D003847 ORTHO05D011443 8.0e-07 60.1 41 68.3
TAR629G1626 Trochodendron aralioides HOM05D000009 ORTHO05D000008 2.3e-06 58.5 50 64.0
SalBow2G3552 Salvia bowleyana HOM05D034888 ORTHO05D005397 8.8e-06 56.6 61 50.8


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