Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0315 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.7e-52 208.4 104 100.0
TAR192G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.6e-17 92.8 68 64.7
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.6e-15 85.5 69 59.4
Rhsim07G0113600 Rhododendron simsii HOM05D009466 ORTHO05D000001 3.2e-13 78.6 75 49.3
Rhsim05G0076500 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.5e-13 77.8 79 48.1
TAR541G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.2e-12 76.6 70 45.7
TAR084G0004 Trochodendron aralioides HOM05D001435 ORTHO05D001304 6.1e-12 74.3 69 47.8
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.1e-10 70.1 71 43.7
Sabra17G0101800 Salix brachista HOM05D000002 ORTHO05D000001 2.2e-09 65.9 68 48.5
TAR720G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.8e-09 65.5 63 42.9
Sabra16G0004600 Salix brachista HOM05D000002 ORTHO05D000001 3.7e-09 65.1 75 42.7
Sabra16G0104200 Salix brachista HOM05D000002 ORTHO05D000001 3.7e-09 65.1 68 48.5
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 1.8e-08 62.8 70 41.4
Hma1.2p1_1397F.1_g280780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.1e-08 62.0 65 44.6
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.1e-08 61.6 71 43.7
Sabra10G0062000 Salix brachista HOM05D000002 ORTHO05D000001 5.3e-08 61.2 62 46.8
TAR492G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.3e-08 61.2 59 40.7
Dinv08503 Davidia involucrata HOM05D000002 ORTHO05D000001 9.1e-08 60.5 68 41.2
TAR650G0001 Trochodendron aralioides HOM05D000067 ORTHO05D000001 1.5e-07 59.7 64 43.8
Oeu003487.1 Olea europaea HOM05D000002 ORTHO05D000001 4.5e-07 58.2 70 40.0
Atru.chr9.1635 Acer truncatum HOM05D000002 ORTHO05D000001 5.9e-07 57.8 61 42.6
GSVIVG01036343001 Vitis vinifera HOM05D000067 ORTHO05D000097 5.9e-07 57.8 63 44.4
RcHm_v2.0_Chr3g0465981 Rosa chinensis HOM05D000002 ORTHO05D000001 7.7e-07 57.4 67 44.8
Hma1.2p1_0240F.1_g100220 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-06 56.6 79 34.2
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.7e-06 56.2 64 42.2
Rhsim06G0171300 Rhododendron simsii HOM05D001152 ORTHO05D000967 1.7e-06 56.2 66 36.4
RcHm_v2.0_Chr7g0200091 Rosa chinensis HOM05D000002 ORTHO05D000001 1.7e-06 56.2 68 36.8
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.7e-06 56.2 70 40.0
Actinidia07495 Actinidia chinensis HOM05D000002 ORTHO05D000001 2.2e-06 55.8 76 35.5
CSS0045631 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-06 55.8 66 37.9
COL.COLO4_13671 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.2e-06 55.8 61 45.9
MELO3C028804.2 Cucumis melo HOM05D000002 ORTHO05D000001 2.2e-06 55.8 67 38.8
Rhsim03G0193600 Rhododendron simsii HOM05D000100 ORTHO05D000052 2.2e-06 55.8 66 36.4
CSS0014384 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.9e-06 55.5 65 41.5
PSO063G5284 Papaver somniferum HOM05D000034 ORTHO05D000037 2.9e-06 55.5 67 38.8
QL08p061042 Quercus lobata HOM05D000002 ORTHO05D000001 2.9e-06 55.5 65 40.0
CSS0020834 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.8e-06 55.1 65 38.5
CSS0047136 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.8e-06 55.1 72 40.3
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.8e-06 55.1 66 39.4
CSS0025666 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.5e-06 54.3 65 38.5
CSS0041837 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.5e-06 54.3 65 35.4
COL.COLO4_25328 Corchorus olitorius HOM05D000002 ORTHO05D000001 6.5e-06 54.3 75 41.3
COL.COLO4_29142 Corchorus olitorius HOM05D000002 ORTHO05D000001 6.5e-06 54.3 75 41.3
MD07G1259300 Malus domestica HOM05D000002 ORTHO05D000157 6.5e-06 54.3 77 39.0
Rhsim09G0019300 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.5e-06 54.3 68 36.8
SEGI_13448 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 6.5e-06 54.3 70 38.6
vmacro07886 Vaccinium macrocarpon HOM05D000422 ORTHO05D011804 6.5e-06 54.3 65 36.9
CSS0017698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.5e-06 53.9 65 35.4
CSS0021297 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.5e-06 53.9 65 36.9
FvH4_5g09403 Fragaria vesca HOM05D000002 ORTHO05D000001 8.5e-06 53.9 74 36.5
MD05G1333300 Malus domestica HOM05D000002 ORTHO05D000001 8.5e-06 53.9 65 41.5


User provided reference genes

Program Settings