Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0310 Trochodendron aralioides HOM05D006884 ORTHO05D008604 0.0e+00 1340.9 682 100.0
Aqoxy4G03234 Aquilegia oxysepala HOM05D006884 ORTHO05D008604 1.2e-281 973.0 689 73.4
GSVIVG01025156001 Vitis vinifera HOM05D006884 ORTHO05D008604 1.0e-280 969.9 683 72.2
Cfa011353 Carpinus fangiana HOM05D006884 ORTHO05D008604 6.7e-277 957.2 686 72.3
Atru.chr3.3680 Acer truncatum HOM05D006884 ORTHO05D008604 1.3e-275 953.0 684 70.8
COL.COLO4_05186 Corchorus olitorius HOM05D006884 ORTHO05D008604 2.4e-274 948.7 684 70.8
QL01p023227 Quercus lobata HOM05D006884 ORTHO05D008604 4.1e-274 948.0 686 71.1
Actinidia07119 Actinidia chinensis HOM05D006884 ORTHO05D008604 4.5e-273 944.5 686 70.6
Hma1.2p1_0071F.1_g038150 Hydrangea macrophylla HOM05D006884 ORTHO05D008604 1.9e-271 939.1 685 71.1
Haze_23897 Corylus avellana HOM05D006884 ORTHO05D008604 6.1e-270 934.1 730 68.1
CSS0004159 Camellia sinensis var. sinensis HOM05D006884 ORTHO05D008604 1.8e-269 932.6 680 70.6
Duzib168G2304 Durio zibethinus HOM05D006884 ORTHO05D008604 9.7e-268 926.8 684 69.9
PSO063G0254 Papaver somniferum HOM05D006884 ORTHO05D008604 5.3e-266 921.0 688 70.6
CiPaw.13G108400 Carya illinoinensis HOM05D006884 ORTHO05D008604 1.7e-264 916.0 690 68.3
Prupe.6G097500 Prunus persica HOM05D006884 ORTHO05D008604 2.3e-261 905.6 685 69.5
Gorai.013G255800 Gossypium raimondii HOM05D006884 ORTHO05D008604 6.7e-261 904.0 684 68.1
Gohir.D13G225000 Gossypium hirsutum HOM05D006884 ORTHO05D008604 1.2e-260 903.3 684 68.3
Gohir.A13G221000 Gossypium hirsutum HOM05D006884 ORTHO05D008604 2.6e-260 902.1 684 67.7
Manes.04G024400 Manihot esculenta HOM05D006884 ORTHO05D008604 9.7e-260 900.2 686 67.9
Lj2C1032T7 Lonicera japonica HOM05D006884 ORTHO05D008604 2.2e-259 899.0 714 66.9
Ciclev10027944m.g Citrus clementina HOM05D006884 ORTHO05D008604 4.8e-259 897.9 674 68.2
vmacro03180 Vaccinium macrocarpon HOM05D006884 ORTHO05D008604 6.3e-259 897.5 687 68.7
CANSAT54G0393 Cannabis sativa HOM05D006884 ORTHO05D008604 7.0e-258 894.0 690 68.6
TWI38G0581 Tripterygium wilfordii HOM05D006884 ORTHO05D008604 1.6e-254 882.9 692 66.5
DCAR_018827 Daucus carota HOM05D006884 ORTHO05D008604 8.0e-254 880.6 673 66.6
PGR119G0543 Punica granatum HOM05D006884 ORTHO05D008604 1.0e-253 880.2 689 66.9
RcHm_v2.0_Chr5g0060051 Rosa chinensis HOM05D006884 ORTHO05D008604 2.0e-252 875.9 683 67.8
TWI38G2405 Tripterygium wilfordii HOM05D006884 ORTHO05D008604 8.3e-251 870.5 688 66.0
ClCG03G002300 Citrullus lanatus HOM05D006884 ORTHO05D008604 1.2e-249 866.7 685 64.5
MELO3C005036.2 Cucumis melo HOM05D006884 ORTHO05D008604 1.7e-248 862.8 683 64.4
Eucgr.J00944 Eucalyptus grandis HOM05D006884 ORTHO05D008604 2.9e-248 862.1 687 64.9
Potri.009G014900 Populus trichocarpa HOM05D006884 ORTHO05D008604 6.6e-248 860.9 681 66.2
Oeu005901.1 Olea europaea HOM05D006884 ORTHO05D008604 1.2e-246 856.7 707 62.7
Cc01_g11430 Coffea canephora HOM05D006884 ORTHO05D008604 1.4e-245 853.2 682 64.5
Solyc11g069170.2 Solanum lycopersicum HOM05D006884 ORTHO05D008604 1.4e-245 853.2 680 64.3
arahy.Tifrunner.gnm1.ann1.AY6ICH Arachis hypogaea HOM05D006884 ORTHO05D008604 2.3e-245 852.4 675 65.5
Sopen11g027910 Solanum pennellii HOM05D006884 ORTHO05D008604 6.8e-245 850.9 680 64.3
Glyma.11G154214 Glycine max HOM05D006884 ORTHO05D008604 4.9e-243 844.7 687 63.9
VMungo1127G0767 Vigna mungo HOM05D006884 ORTHO05D008604 2.4e-242 842.4 680 65.1
Phvul.011G073400 Phaseolus vulgaris HOM05D006884 ORTHO05D008604 5.4e-242 841.3 678 65.0
Psat7g223440 Pisum sativum HOM05D006884 ORTHO05D008604 1.0e-240 837.0 678 64.3
Peaxi162Scf00351g00322 Petunia axillaris HOM05D006884 ORTHO05D008604 1.1e-239 833.6 702 62.3
PGSC0003DMG400008066 Solanum tuberosum HOM05D006884 ORTHO05D008604 1.1e-239 833.6 723 60.4
Lalb_Chr01g0004191 Lupinus albus HOM05D006884 ORTHO05D008604 1.2e-238 830.1 675 63.0
FvH4_3g32920 Fragaria vesca HOM05D006884 ORTHO05D008604 1.4e-237 826.6 679 64.7
MSTRG.12324 Avicennia marina HOM05D006884 ORTHO05D008604 6.8e-237 824.3 688 61.6
FAN11G3181 Fragaria x ananassa HOM05D006884 ORTHO05D008604 6.8e-237 824.3 679 64.8
Medtr4g060500 Medicago truncatula HOM05D006884 ORTHO05D008604 2.0e-236 822.8 685 62.9
PSO339G1719 Papaver somniferum HOM05D006884 ORTHO05D008604 5.8e-236 821.2 599 71.0
Migut.N02612 Erythranthe guttata HOM05D006884 ORTHO05D008604 9.8e-236 820.5 687 61.4
Sed0010984 Sechium edule HOM05D006884 ORTHO05D008604 2.2e-235 819.3 686 62.2
Cpa.g.sc139.78 Carica papaya HOM05D006884 ORTHO05D008604 4.9e-235 818.1 602 69.1
Lj3g0026527 Lotus japonicus HOM05D006884 ORTHO05D008604 1.4e-234 816.6 679 62.7
MBI14_g07928_MAGBIO Magnolia biondii HOM05D006884 ORTHO05D008604 1.4e-234 816.6 607 71.2
TPR.G15554 Trifolium pratense HOM05D006884 ORTHO05D008604 1.4e-234 816.6 686 63.6
FAN25G2544 Fragaria x ananassa HOM05D006884 ORTHO05D008604 9.2e-234 813.9 684 63.7
ATR0759G051 Amborella trichopoda HOM05D006884 ORTHO05D008604 2.3e-232 809.3 681 64.2
Nitab4.5_0000999g0100 Nicotiana tabacum HOM05D006884 ORTHO05D008604 1.8e-229 799.7 729 58.0
THA.LOC104815748 Tarenaya hassleriana HOM05D006884 ORTHO05D008604 8.3e-227 790.8 686 59.3
Nitab4.5_0002186g0020 Nicotiana tabacum HOM05D006884 ORTHO05D008604 1.4e-226 790.0 643 63.5
AT1G07970 Arabidopsis thaliana HOM05D006884 ORTHO05D008604 9.2e-226 787.3 692 60.1
Carub.0001s0732 Capsella rubella HOM05D006884 ORTHO05D008604 1.6e-225 786.6 688 60.2
HanXRQChr07g0197411 Helianthus annuus HOM05D006884 ORTHO05D008604 6.0e-225 784.6 686 60.6
Thhalv10006976m.g Eutrema salsugineum HOM05D006884 ORTHO05D008604 1.9e-223 779.6 689 59.7
CARHR007750 Cardamine hirsuta HOM05D006884 ORTHO05D008604 6.8e-221 771.2 693 59.6
Sc06g0010010 Simmondsia chinensis HOM05D006884 ORTHO05D008604 6.8e-221 771.2 686 60.5
C05p05970 Brassica napus HOM05D006884 ORTHO05D008604 2.0e-220 769.6 686 59.5
BolC5t29358H Brassica oleracea HOM05D003203 ORTHO05D003526 7.5e-220 767.7 686 59.2
ECA238G4524 Erigeron canadensis HOM05D006884 ORTHO05D008604 1.3e-219 766.9 672 60.1
AL1G18300 Arabidopsis lyrata HOM05D006884 ORTHO05D008604 1.9e-218 763.1 688 59.0
Lsat_1_v5_gn_2_97900 Lactuca sativa HOM05D006884 ORTHO05D008604 5.4e-218 761.5 676 59.3
A06p05030 Brassica napus HOM05D006884 ORTHO05D008604 9.2e-218 760.8 686 58.7
BraA06t23709Z Brassica rapa HOM05D006884 ORTHO05D008604 1.3e-216 756.9 688 58.4
Hund10472 Selenicereus undatus HOM05D006884 ORTHO05D008604 1.3e-216 756.9 685 60.0
SGA_v2.0_scaffold2G00907 Striga asiatica HOM05D006884 ORTHO05D008604 1.7e-216 756.5 641 62.2
Thecc.09G259000 Theobroma cacao HOM05D006884 ORTHO05D008604 1.1e-213 747.3 487 76.4
arahy.Tifrunner.gnm1.ann1.H1W27A Arachis hypogaea HOM05D006884 ORTHO05D008604 1.2e-212 743.8 602 64.6
Ca_19247_v3 Cicer arietinum L. HOM05D006884 ORTHO05D008604 6.4e-211 738.0 685 59.3
SalBow3G0672 Salvia bowleyana HOM05D006884 ORTHO05D008604 1.1e-210 737.3 690 57.5
BcaB02g06701 Brassica carinata HOM05D006884 ORTHO05D008604 1.3e-208 730.3 662 58.9
AUR62025009 Chenopodium quinoa HOM05D006884 ORTHO05D008604 4.3e-207 725.3 679 57.9
Aa31LG8G13130 Aethionema arabicum HOM05D006884 ORTHO05D008604 8.1e-206 721.1 681 57.6
BcaC05g24709 Brassica carinata HOM05D006884 ORTHO05D008604 2.4e-205 719.5 683 56.5
SEGI_12216 Sequoiadendron giganteum HOM05D006884 ORTHO05D008604 7.1e-202 708.0 708 54.4
AUR62006527 Chenopodium quinoa HOM05D006884 ORTHO05D008604 2.5e-199 699.5 680 56.2
CDE09G0273 Ceratophyllum demersum HOM05D006884 ORTHO05D008604 1.3e-198 697.2 648 58.2
Sabra09G0009400 Salix brachista HOM05D006884 ORTHO05D008604 2.1e-198 696.4 624 60.4
CAN.G631.5 Capsicum annuum HOM05D006884 ORTHO05D008604 2.4e-197 693.0 619 58.3
CsaV3_1G012990 Cucumis sativus L. HOM05D006884 ORTHO05D008604 2.4e-197 693.0 585 62.2
Zm00001eb397080 Zea mays HOM05D006884 ORTHO05D008604 3.8e-195 685.6 679 55.4
Os03g0288800 Oryza sativa ssp. japonica HOM05D006884 ORTHO05D008604 2.1e-193 679.9 679 56.1
HPP92_025089 Vanilla planifolia HOM05D006884 ORTHO05D008604 2.7e-193 679.5 671 56.0
Sp4g05030 Schrenkiella parvula HOM05D006884 ORTHO05D008604 1.8e-165 587.0 603 53.7
Rhsim08G0043200 Rhododendron simsii HOM05D006884 ORTHO05D008604 1.4e-162 577.4 639 52.6
Mapoly0043s0112 Marchantia polymorpha HOM05D006884 ORTHO05D008604 1.2e-148 531.2 705 44.7
unitig_61.g26171 Utricularia gibba HOM05D006884 ORTHO05D008604 2.0e-143 513.8 621 48.6
SMO364G0331 Selaginella moellendorffii HOM05D006884 ORTHO05D008604 2.1e-137 493.8 503 51.7
Actinidia24083 Actinidia chinensis HOM05D006884 ORTHO05D008604 9.8e-135 485.0 301 76.1
Pp3c12_22070 Physcomitrium patens HOM05D006884 ORTHO05D008604 8.6e-131 471.9 713 42.5
arahy.Tifrunner.gnm1.ann1.REDW7M Arachis hypogaea HOM05D006884 ORTHO05D008604 4.0e-120 436.4 280 74.3
BcaB07g34161 Brassica carinata HOM05D006884 ORTHO05D008604 2.9e-118 430.3 357 58.3
Actinidia24084 Actinidia chinensis HOM05D006884 ORTHO05D008604 2.1e-76 291.2 312 57.1
Glyma.12G071233 Glycine max HOM05D006884 ORTHO05D008604 2.4e-72 277.7 214 65.0
Nn1g02428 Nelumbo nucifera HOM05D006884 ORTHO05D008604 7.9e-44 183.0 122 75.4
Nn1g02077 Nelumbo nucifera HOM05D006884 ORTHO05D008604 2.6e-42 177.9 104 81.7
Nn3g17897 Nelumbo nucifera HOM05D006884 ORTHO05D008604 9.1e-40 169.5 104 77.9
Nn4g22222 Nelumbo nucifera HOM05D006884 ORTHO05D008604 9.1e-40 169.5 100 80.0
SEGI_34075 Sequoiadendron giganteum HOM05D000114 ORTHO05D008604 7.7e-39 166.4 471 32.9
Nn3g19002 Nelumbo nucifera HOM05D005115 ORTHO05D005703 3.8e-30 137.5 84 78.6
Nn4g22225 Nelumbo nucifera HOM05D006884 ORTHO05D008604 8.5e-30 136.3 84 77.4
Glyma.12G071167 Glycine max HOM05D006884 ORTHO05D008604 1.2e-26 125.9 202 43.6
Nn1g05254 Nelumbo nucifera HOM05D006884 ORTHO05D008604 2.7e-20 104.8 62 79.0
Nn1g03843 Nelumbo nucifera HOM05D006884 ORTHO05D008604 8.3e-17 93.2 68 66.2
Cre12.g555200 Chlamydomonas reinhardtii HOM05D006884 ORTHO05D008604 1.0e-14 86.3 322 25.2
Nitab4.5_0002186g0030 Nicotiana tabacum HOM05D006884 ORTHO05D008604 2.8e-12 78.2 47 70.2
Aa31LG3G16570 Aethionema arabicum HOM05D006884 ORTHO05D008604 9.8e-10 69.7 181 29.3


User provided reference genes

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