Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0176 Trochodendron aralioides HOM05D003920 ORTHO05D004877 5.6e-220 767.3 390 100.0
Nn7g36164 Nelumbo nucifera HOM05D003920 ORTHO05D004877 3.1e-149 532.3 365 76.7
Nn2g15431 Nelumbo nucifera HOM05D003920 ORTHO05D004877 7.5e-148 527.7 365 75.3
Dinv43454 Davidia involucrata HOM05D003920 ORTHO05D004877 1.7e-144 516.5 365 73.4
Aqoxy2G00138 Aquilegia oxysepala HOM05D003920 ORTHO05D004877 1.5e-143 513.5 365 74.2
PSO339G5616 Papaver somniferum HOM05D003920 ORTHO05D004877 4.3e-143 511.9 366 72.7
PSO384G3532 Papaver somniferum HOM05D003920 ORTHO05D004877 9.5e-143 510.8 366 73.0
TAR633G1074 Trochodendron aralioides HOM05D003920 ORTHO05D004877 4.1e-138 495.4 353 70.3
MBI04_g13623_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D004877 9.2e-138 494.2 353 73.9
FAN06G2354 Fragaria x ananassa HOM05D003920 ORTHO05D004877 4.6e-137 491.9 367 71.4
FvH4_7g00890 Fragaria vesca HOM05D003920 ORTHO05D004877 7.8e-137 491.1 367 71.1
Sabra09G0046300 Salix brachista HOM05D003920 ORTHO05D004877 5.6e-135 485.0 365 69.9
Manes.10G144700 Manihot esculenta HOM05D003920 ORTHO05D004877 1.6e-134 483.4 364 69.8
MD02G1313900 Malus domestica HOM05D003920 ORTHO05D004877 2.8e-134 482.6 367 70.3
Psat5g204200 Pisum sativum HOM05D003920 ORTHO05D004877 6.2e-134 481.5 363 65.8
Potri.001G268200 Populus trichocarpa HOM05D003920 ORTHO05D004877 6.2e-134 481.5 365 71.0
MD07G1008500 Malus domestica HOM05D003920 ORTHO05D004877 1.8e-133 479.9 367 69.8
DCAR_003208 Daucus carota HOM05D003920 ORTHO05D004877 3.1e-133 479.2 365 71.5
Prupe.2G011700 Prunus persica HOM05D003920 ORTHO05D004877 3.1e-133 479.2 370 69.5
Sabra16G0164300 Salix brachista HOM05D003920 ORTHO05D004877 2.0e-132 476.5 364 70.3
Lj3g0003225 Lotus japonicus HOM05D003920 ORTHO05D004877 5.8e-132 474.9 367 68.1
Potri.009G062600 Populus trichocarpa HOM05D003920 ORTHO05D004877 5.8e-132 474.9 367 70.0
Lalb_Chr01g0015291 Lupinus albus HOM05D003920 ORTHO05D004877 1.3e-131 473.8 366 67.8
Medtr3g028190 Medicago truncatula HOM05D003920 ORTHO05D004877 1.7e-131 473.4 363 67.8
Ca_27172_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 2.9e-131 472.6 363 66.9
Gohir.D08G038400 Gossypium hirsutum HOM05D003920 ORTHO05D004877 6.4e-131 471.5 365 69.0
Rhsim07G0054700 Rhododendron simsii HOM05D003920 ORTHO05D004877 1.1e-130 470.7 362 69.1
Gohir.A08G027700 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.9e-130 469.9 365 69.9
Gorai.004G036900 Gossypium raimondii HOM05D003920 ORTHO05D004877 4.1e-130 468.8 365 68.8
Glyma.15G272400 Glycine max HOM05D003920 ORTHO05D004877 2.7e-129 466.1 371 66.3
Phvul.005G019900 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 3.5e-129 465.7 371 67.1
QL04p007133 Quercus lobata HOM05D003920 ORTHO05D004877 1.0e-128 464.2 329 72.9
CSS0030964 Camellia sinensis var. sinensis HOM05D003920 ORTHO05D004877 3.0e-128 462.6 330 73.0
VMungo1080G0709 Vigna mungo HOM05D003920 ORTHO05D004877 3.0e-128 462.6 371 66.0
TPR.G12140 Trifolium pratense HOM05D003920 ORTHO05D004877 3.9e-128 462.2 353 66.9
TWI73G0359 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 3.9e-128 462.2 387 65.4
Glyma.08G153800 Glycine max HOM05D003920 ORTHO05D004877 1.1e-127 460.7 371 65.8
arahy.Tifrunner.gnm1.ann1.Z50281 Arachis hypogaea HOM05D003920 ORTHO05D004877 5.6e-127 458.4 366 65.6
ECA248G0446 Erigeron canadensis HOM05D003920 ORTHO05D004877 7.3e-127 458.0 363 68.3
Sopen10g011530 Solanum pennellii HOM05D003920 ORTHO05D004877 7.3e-127 458.0 365 66.3
Lj9C630T11 Lonicera japonica HOM05D003920 ORTHO05D004877 9.6e-127 457.6 361 62.6
Peaxi162Scf00428g00618 Petunia axillaris HOM05D003920 ORTHO05D004877 3.6e-126 455.7 365 64.7
Eucgr.J01264 Eucalyptus grandis HOM05D003920 ORTHO05D004877 6.2e-126 454.9 364 66.5
DCAR_022405 Daucus carota HOM05D003920 ORTHO05D004877 8.1e-126 454.5 365 67.7
HanXRQChr01g0016141 Helianthus annuus HOM05D003920 ORTHO05D004877 8.1e-126 454.5 362 66.0
CAN.G709.1 Capsicum annuum HOM05D003920 ORTHO05D004877 1.1e-125 454.1 362 66.9
Solyc10g038000.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 1.4e-125 453.8 365 66.0
arahy.Tifrunner.gnm1.ann1.LBVL0K Arachis hypogaea HOM05D003920 ORTHO05D004877 2.4e-125 453.0 365 65.5
Peaxi162Scf00407g00639 Petunia axillaris HOM05D003920 ORTHO05D004877 8.9e-125 451.1 364 63.7
COL.COLO4_23923 Corchorus olitorius HOM05D003920 ORTHO05D004877 1.5e-124 450.3 359 63.0
Haze_03212 Corylus avellana HOM05D003920 ORTHO05D004877 1.7e-123 446.8 328 71.0
ATR0605G260 Amborella trichopoda HOM05D003920 ORTHO05D004877 4.9e-123 445.3 361 67.0
Sed0011667 Sechium edule HOM05D003920 ORTHO05D004877 1.1e-122 444.1 370 64.1
CDE04G0006 Ceratophyllum demersum HOM05D003920 ORTHO05D004877 1.4e-122 443.7 368 63.6
vmacro13655 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 5.4e-122 441.8 445 57.5
Gorai.004G173300 Gossypium raimondii HOM05D003920 ORTHO05D004877 1.3e-120 437.2 359 64.3
Nitab4.5_0000634g0100 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.7e-120 436.8 352 62.8
Ciclev10031666m.g Citrus clementina HOM05D003920 ORTHO05D004877 3.0e-120 436.0 328 64.6
RcHm_v2.0_Chr1g0315781 Rosa chinensis HOM05D003920 ORTHO05D004877 1.9e-119 433.3 331 69.5
AUR62009376 Chenopodium quinoa HOM05D003920 ORTHO05D004877 2.5e-119 433.0 347 64.3
FAN03G2194 Fragaria x ananassa HOM05D003920 ORTHO05D004877 3.3e-119 432.6 331 69.2
FAN01G3017 Fragaria x ananassa HOM05D003920 ORTHO05D004877 9.6e-119 431.0 331 69.2
PGR044G2195 Punica granatum HOM05D003920 ORTHO05D004877 1.3e-118 430.6 369 63.1
Nitab4.5_0011837g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.6e-118 430.3 380 60.5
Thecc.01G412100 Theobroma cacao HOM05D003920 ORTHO05D004877 1.6e-118 430.3 329 69.9
Migut.N01471 Erythranthe guttata HOM05D003920 ORTHO05D004877 6.2e-118 428.3 363 64.2
Solyc01g087030.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 2.4e-117 426.4 366 61.7
Sopen01g034110 Solanum pennellii HOM05D003920 ORTHO05D004877 4.0e-117 425.6 366 61.5
Atru.chr11.2647 Acer truncatum HOM05D003920 ORTHO05D004877 9.0e-117 424.5 332 67.8
EL10Ac2g04315 Beta vulgaris HOM05D003920 ORTHO05D004877 1.2e-116 424.1 346 64.2
THA.LOC104819067 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 1.2e-116 424.1 364 63.2
Sc10g0000010 Simmondsia chinensis HOM05D003920 ORTHO05D004877 1.5e-116 423.7 363 62.0
THA.LOC104827426 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 3.4e-116 422.5 361 64.5
Thhalv10010518m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 9.9e-116 421.0 363 62.3
CARHR291420 Cardamine hirsuta HOM05D003920 ORTHO05D004877 1.3e-115 420.6 364 63.5
Sp1g00020 Schrenkiella parvula HOM05D003920 ORTHO05D004877 3.8e-115 419.1 365 61.6
SGA_v2.0_scaffold167G38446 Striga asiatica HOM05D003920 ORTHO05D004877 4.9e-115 418.7 367 61.6
HPP92_005768 Vanilla planifolia HOM05D003920 ORTHO05D004877 4.9e-115 418.7 367 61.6
Zm00001eb381600 Zea mays HOM05D003920 ORTHO05D004877 1.9e-114 416.8 372 61.6
MSTRG.5016 Avicennia marina HOM05D003920 ORTHO05D004877 3.2e-114 416.0 356 62.4
BraA08t33064Z Brassica rapa HOM05D003920 ORTHO05D004877 1.2e-113 414.1 363 62.0
SalBow5G4770 Salvia bowleyana HOM05D003920 ORTHO05D004877 2.1e-113 413.3 366 62.6
BcaC07g37767 Brassica carinata HOM05D003920 ORTHO05D004877 2.7e-113 412.9 363 62.3
SEGI_34678 Sequoiadendron giganteum HOM05D003920 ORTHO05D004877 6.0e-113 411.8 360 60.0
Thhalv10021103m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 7.3e-111 404.8 366 58.5
Cc02_g27790 Coffea canephora HOM05D003920 ORTHO05D004877 4.0e-109 399.1 330 65.2
Lsat_1_v5_gn_1_107981 Lactuca sativa HOM05D003920 ORTHO05D004877 4.0e-109 399.1 338 64.2
A08p28590 Brassica napus HOM05D003920 ORTHO05D004877 5.8e-108 395.2 367 59.1
AT3G08505 Arabidopsis thaliana HOM05D003920 ORTHO05D004877 7.6e-108 394.8 363 57.0
unitig_85.g27216 Utricularia gibba HOM05D003920 ORTHO05D004877 1.3e-107 394.0 364 52.7
Aa31LG10G17420 Aethionema arabicum HOM05D003920 ORTHO05D004877 4.9e-107 392.1 435 52.6
Sp3g06990 Schrenkiella parvula HOM05D003920 ORTHO05D004877 1.1e-106 391.0 366 58.2
AL3G19480 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 1.4e-106 390.6 363 58.7
CsaV3_7G031170 Cucumis sativus L. HOM05D003920 ORTHO05D004877 1.9e-106 390.2 329 63.5
Manes.07G005000 Manihot esculenta HOM05D003920 ORTHO05D004877 4.2e-106 389.0 300 70.7
MELO3C023541.2 Cucumis melo HOM05D003920 ORTHO05D004877 7.1e-106 388.3 329 63.5
Carub.0003s0765 Capsella rubella HOM05D003920 ORTHO05D004877 2.7e-105 386.3 363 57.9
AL5G46410 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 3.9e-104 382.5 334 62.0
CARHR082810 Cardamine hirsuta HOM05D003920 ORTHO05D004877 1.6e-102 377.1 363 51.0
Gohir.D08G166100 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.6e-102 377.1 251 68.5
BcaC09g47976 Brassica carinata HOM05D003920 ORTHO05D004877 1.1e-101 374.4 363 54.5
Carub.0005s3016 Capsella rubella HOM05D003920 ORTHO05D004877 3.4e-100 369.4 329 60.5
MSTRG.20593 Avicennia marina HOM05D003920 ORTHO05D004877 7.6e-100 368.2 372 55.4
BcaB04g21254 Brassica carinata HOM05D003920 ORTHO05D004877 7.6e-100 368.2 363 55.9
BcaB03g11569 Brassica carinata HOM05D003920 ORTHO05D004877 1.0e-99 367.9 364 54.7
Thhalv10023829m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 1.0e-99 367.9 370 55.9
A08p10660 Brassica napus HOM05D003920 ORTHO05D004877 1.7e-99 367.1 329 61.1
BraA01t04343Z Brassica rapa HOM05D003920 ORTHO05D004877 2.2e-99 366.7 360 54.2
BolC8t48154H Brassica oleracea HOM05D003920 ORTHO05D004877 2.9e-99 366.3 329 61.1
BraA03t12740Z Brassica rapa HOM05D003920 ORTHO05D004877 3.8e-99 365.9 361 54.8
A03p35650 Brassica napus HOM05D003920 ORTHO05D004877 9.3e-98 361.3 349 55.3
Hund03665 Selenicereus undatus HOM05D003920 ORTHO05D004877 2.1e-97 360.1 331 61.6
BolC3t16599H Brassica oleracea HOM05D003920 ORTHO05D004877 3.5e-97 359.4 361 54.3
BolC8t49780H Brassica oleracea HOM05D003920 ORTHO05D004877 2.3e-96 356.7 331 58.9
AUR62023057 Chenopodium quinoa HOM05D003920 ORTHO05D004877 3.9e-96 355.9 303 63.0
ClCG09G004250 Citrullus lanatus HOM05D003920 ORTHO05D004877 5.1e-96 355.5 276 63.4
BcaC01g04265 Brassica carinata HOM05D003920 ORTHO05D004877 1.5e-95 354.0 352 54.5
C03p43290 Brassica napus HOM05D003920 ORTHO05D004877 1.9e-95 353.6 349 54.7
Pp3c5_25680 Physcomitrium patens HOM05D003920 ORTHO05D004877 1.9e-95 353.6 354 48.3
TWI53G1741 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 2.1e-94 350.1 277 62.8
Nitab4.5_0004786g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.6e-92 343.2 356 58.1
Actinidia24671 Actinidia chinensis HOM05D003920 ORTHO05D004877 6.5e-91 338.6 288 59.4
Aa31LG5G18640 Aethionema arabicum HOM05D003920 ORTHO05D004877 1.1e-90 337.8 222 68.9
Mapoly0042s0020 Marchantia polymorpha HOM05D003920 ORTHO05D004877 1.9e-90 337.0 412 48.1
vmacro08182 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 1.0e-88 331.3 300 64.0
Nitab4.5_0001299g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 3.0e-88 329.7 341 53.1
Gohir.A08G145200 Gossypium hirsutum HOM05D003920 ORTHO05D004877 8.7e-88 328.2 290 63.8
Lj7A569G59 Lonicera japonica HOM05D003920 ORTHO05D004877 1.1e-87 327.8 265 61.9
Actinidia31057 Actinidia chinensis HOM05D003920 ORTHO05D004877 1.6e-86 323.9 363 54.0
PGR044G2672 Punica granatum HOM05D003920 ORTHO05D004877 8.2e-86 321.6 340 53.8
SMO203G0245 Selaginella moellendorffii HOM05D003920 ORTHO05D004877 1.8e-85 320.5 350 51.7
C08p21410 Brassica napus HOM05D003920 ORTHO05D004877 4.5e-84 315.8 224 64.3
Zm00001eb252860 Zea mays HOM05D003920 ORTHO05D004877 2.2e-83 313.5 333 47.7
SGA_v2.0_scaffold24G10678 Striga asiatica HOM05D003920 ORTHO05D004877 1.2e-81 307.8 363 47.1
Potri.004G134400 Populus trichocarpa HOM05D003920 ORTHO05D004877 4.6e-81 305.8 334 53.0
BcaC07g39147 Brassica carinata HOM05D003920 ORTHO05D004877 2.3e-80 303.5 329 50.2
Sp5g00030 Schrenkiella parvula HOM05D003920 ORTHO05D004877 1.7e-78 297.4 363 49.6
Lalb_Chr20g0108061 Lupinus albus HOM05D003920 ORTHO05D004877 2.0e-76 290.4 339 51.9
Lalb_Chr01g0015331 Lupinus albus HOM05D003920 ORTHO05D004877 2.6e-76 290.0 334 54.5
Sabra04G0083700 Salix brachista HOM05D003920 ORTHO05D004877 1.0e-75 288.1 186 68.3
Actinidia36714 Actinidia chinensis HOM05D003920 ORTHO05D004877 5.0e-75 285.8 363 44.6
Peaxi162Scf00148g00610 Petunia axillaris HOM05D003920 ORTHO05D004877 1.1e-74 284.6 319 47.6
arahy.Tifrunner.gnm1.ann1.3CZ6TN Arachis hypogaea HOM05D003920 ORTHO05D004877 1.4e-74 284.3 337 51.6
Glyma.15G273000 Glycine max HOM05D003920 ORTHO05D004877 4.2e-74 282.7 336 52.1
Phvul.005G020000 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 1.2e-73 281.2 342 49.1
VMungo1080G1751 Vigna mungo HOM05D003920 ORTHO05D004877 1.2e-73 281.2 337 52.2
AagrBONN_evm.TU.Sc2ySwM_344.3645 Anthoceros agrestis HOM05D003920 ORTHO05D004877 2.1e-73 280.4 333 49.5
Psat5g204240 Pisum sativum HOM05D003920 ORTHO05D004877 3.6e-73 279.6 338 47.9
arahy.Tifrunner.gnm1.ann1.NHZH5I Arachis hypogaea HOM05D003920 ORTHO05D004877 4.7e-73 279.3 331 52.0
TPR.G12281 Trifolium pratense HOM05D003920 ORTHO05D004877 7.9e-73 278.5 332 50.3
Lj3g0002246 Lotus japonicus HOM05D003920 ORTHO05D004877 1.5e-71 274.2 341 48.4
Ca_14370_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 4.4e-71 272.7 338 49.7
Medtr3g028170 Medicago truncatula HOM05D003920 ORTHO05D004877 7.4e-71 271.9 335 51.0
Glyma.08G154100 Glycine max HOM05D003920 ORTHO05D004877 9.7e-71 271.6 337 51.6
Nitab4.5_0000254g0170 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.3e-64 250.4 184 63.0
Cre06.g278136 Chlamydomonas reinhardtii HOM05D003920 ORTHO05D004877 5.5e-58 229.2 217 47.9
arahy.Tifrunner.gnm1.ann1.HIY6S0 Arachis hypogaea HOM05D003920 ORTHO05D004877 8.8e-56 221.9 329 43.2
arahy.Tifrunner.gnm1.ann1.YQ2HRW Arachis hypogaea HOM05D003920 ORTHO05D004877 3.4e-55 219.9 333 44.1
Nitab4.5_0003190g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.1e-49 200.7 183 53.6
PRCOL_00005356 Prasinoderma coloniale HOM05D003920 ORTHO05D004877 6.1e-49 199.1 238 40.8
GSVIVG01032073001 Vitis vinifera HOM05D003920 ORTHO05D004877 3.0e-48 196.8 109 80.7
Oeu039134.1 Olea europaea HOM05D003920 ORTHO05D004877 3.1e-45 186.8 110 77.3
unitig_26.g8826 Utricularia gibba HOM05D003920 ORTHO05D004877 4.1e-45 186.4 323 39.6
Phvul.011G110100 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 5.2e-40 169.5 93 79.6
TPR.G31394 Trifolium pratense HOM05D002628 ORTHO05D002785 8.1e-17 92.4 119 39.5
QL04p032014 Quercus lobata HOM05D003920 ORTHO05D004877 2.3e-11 74.3 38 76.3
QL04p032319 Quercus lobata HOM05D003920 ORTHO05D004877 2.3e-11 74.3 48 62.5
QL04p005704 Quercus lobata HOM05D003920 ORTHO05D004877 3.6e-09 67.0 97 49.5
QL05p013448 Quercus lobata HOM05D001342 ORTHO05D017698 1.2e-07 62.0 45 66.7
Cc02_g27780 Coffea canephora HOM05D003920 ORTHO05D017698 5.8e-07 59.7 43 67.4
BolC8t48153H Brassica oleracea HOM05D003920 ORTHO05D017698 1.7e-06 58.2 44 63.6


User provided reference genes

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