Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0168 Trochodendron aralioides HOM05D005619 ORTHO05D006696 1.1e-139 500.0 245 100.0
Nn2g11500 Nelumbo nucifera HOM05D005619 ORTHO05D006696 6.1e-87 324.7 187 85.0
MBI05_g05306_MAGBIO Magnolia biondii HOM05D005619 ORTHO05D006696 2.2e-84 316.2 184 81.0
Aqoxy5G02842 Aquilegia oxysepala HOM05D005619 ORTHO05D006696 2.8e-84 315.8 187 80.7
Aqoxy4G02564 Aquilegia oxysepala HOM05D005619 ORTHO05D006696 4.1e-83 312.0 187 80.7
PSO339G2325 Papaver somniferum HOM05D005619 ORTHO05D006696 5.9e-82 308.1 185 80.0
GSVIVG01032822001 Vitis vinifera HOM05D005619 ORTHO05D006696 2.2e-81 306.2 187 78.6
Hund13861 Selenicereus undatus HOM05D005619 ORTHO05D006696 2.6e-77 292.7 184 76.1
Medtr3g070470 Medicago truncatula HOM05D005619 ORTHO05D006696 5.7e-77 291.6 187 73.8
Sc11g0001040 Simmondsia chinensis HOM05D005619 ORTHO05D006696 5.7e-77 291.6 187 74.9
Dinv16155 Davidia involucrata HOM05D005619 ORTHO05D006696 1.3e-76 290.4 187 75.9
TAR633G2706 Trochodendron aralioides HOM05D005619 ORTHO05D006696 1.8e-75 286.6 150 93.3
Actinidia31994 Actinidia chinensis HOM05D005619 ORTHO05D006696 5.3e-75 285.0 187 74.9
CDE04G2394 Ceratophyllum demersum HOM05D005619 ORTHO05D006696 7.0e-75 284.6 180 75.6
AUR62034382 Chenopodium quinoa HOM05D005619 ORTHO05D006696 2.6e-74 282.7 187 73.8
CANSAT56G2799 Cannabis sativa HOM05D005619 ORTHO05D006696 1.0e-73 280.8 187 73.8
AUR62022323 Chenopodium quinoa HOM05D005619 ORTHO05D006696 1.0e-73 280.8 187 73.8
Lj3A878T24 Lonicera japonica HOM05D005619 ORTHO05D006696 1.7e-73 280.0 184 74.5
CSS0006168 Camellia sinensis var. sinensis HOM05D005619 ORTHO05D006696 2.2e-73 279.6 184 75.0
QL08p063145 Quercus lobata HOM05D005619 ORTHO05D006696 3.8e-73 278.9 186 72.6
Zm00001eb412290 Zea mays HOM05D005619 ORTHO05D006696 8.5e-73 277.7 184 72.3
Lj1g0018800 Lotus japonicus HOM05D005619 ORTHO05D006696 3.2e-72 275.8 187 70.6
THA.LOC104824313 Tarenaya hassleriana HOM05D005619 ORTHO05D006696 3.2e-72 275.8 185 71.4
TPR.G16245 Trifolium pratense HOM05D005619 ORTHO05D006696 4.2e-72 275.4 193 70.5
EL10Ac2g04534 Beta vulgaris HOM05D005619 ORTHO05D006696 5.5e-72 275.0 187 70.6
HPP92_000422 Vanilla planifolia HOM05D000755 ORTHO05D006696 5.5e-72 275.0 186 71.0
Lj6g0025019 Lotus japonicus HOM05D005619 ORTHO05D006696 9.4e-72 274.2 187 71.1
HPP92_000355 Vanilla planifolia HOM05D000755 ORTHO05D000642 9.4e-72 274.2 213 63.4
Cpa.g.sc19.176 Carica papaya HOM05D005619 ORTHO05D006696 1.2e-71 273.9 187 71.1
Os08g0274700 Oryza sativa ssp. japonica HOM05D005619 ORTHO05D006696 1.6e-71 273.5 184 71.7
Zm00001eb198650 Zea mays HOM05D005619 ORTHO05D006696 1.6e-71 273.5 184 71.7
Psat5g128520 Pisum sativum HOM05D005619 ORTHO05D006696 2.1e-71 273.1 187 70.6
Sabra08G0050000 Salix brachista HOM05D005619 ORTHO05D006696 2.1e-71 273.1 187 72.2
Atru.chr12.29 Acer truncatum HOM05D005619 ORTHO05D006696 2.7e-71 272.7 189 69.8
Thecc.10G016900 Theobroma cacao HOM05D005619 ORTHO05D006696 3.6e-71 272.3 184 71.7
COL.COLO4_38547 Corchorus olitorius HOM05D005598 ORTHO05D006587 6.1e-71 271.6 222 61.7
Hma1.2p1_2256F.1_g318210 Hydrangea macrophylla HOM05D005619 ORTHO05D006696 8.0e-71 271.2 184 71.7
Thhalv10017287m.g Eutrema salsugineum HOM05D005619 ORTHO05D006696 2.3e-70 269.6 183 72.7
Haze_17223 Corylus avellana HOM05D005619 ORTHO05D006696 3.0e-70 269.2 187 72.2
AL5G36640 Arabidopsis lyrata HOM05D005619 ORTHO05D006696 6.7e-70 268.1 187 69.5
ATR0481G004 Amborella trichopoda HOM05D005619 ORTHO05D006696 1.2e-69 267.3 184 68.5
arahy.Tifrunner.gnm1.ann1.IDH5I9 Arachis hypogaea HOM05D005619 ORTHO05D006696 1.2e-69 267.3 187 70.6
Potri.008G068100 Populus trichocarpa HOM05D005619 ORTHO05D006696 1.2e-69 267.3 187 70.6
Prupe.2G249700 Prunus persica HOM05D005619 ORTHO05D006696 1.2e-69 267.3 201 65.2
AT1G19080 Arabidopsis thaliana HOM05D005619 ORTHO05D006696 1.5e-69 266.9 187 69.5
AT3G55490 Arabidopsis thaliana HOM05D005619 ORTHO05D006696 1.5e-69 266.9 187 69.5
Manes.04G157300 Manihot esculenta HOM05D005619 ORTHO05D006696 1.5e-69 266.9 187 70.6
Cfa001322 Carpinus fangiana HOM05D005619 ORTHO05D006696 2.6e-69 266.2 187 71.1
arahy.Tifrunner.gnm1.ann1.2YL4XG Arachis hypogaea HOM05D005619 ORTHO05D006696 3.3e-69 265.8 187 69.5
Duzib128G1619 Durio zibethinus HOM05D005619 ORTHO05D006696 3.3e-69 265.8 184 69.6
Glyma.18G027600 Glycine max HOM05D005619 ORTHO05D006696 3.3e-69 265.8 187 69.5
VMungo1383G0062 Vigna mungo HOM05D005619 ORTHO05D006696 3.3e-69 265.8 186 67.7
Phvul.001G242800 Phaseolus vulgaris HOM05D005619 ORTHO05D006696 4.4e-69 265.4 187 67.9
CsaV3_6G001830 Cucumis sativus L. HOM05D005619 ORTHO05D006696 5.7e-69 265.0 189 68.8
Prupe.2G202300 Prunus persica HOM05D005619 ORTHO05D006696 5.7e-69 265.0 183 69.4
CARHR165540 Cardamine hirsuta HOM05D005619 ORTHO05D006696 9.7e-69 264.2 187 68.4
Gohir.A06G163800 Gossypium hirsutum HOM05D005619 ORTHO05D006696 9.7e-69 264.2 183 69.4
Gohir.D06G169500 Gossypium hirsutum HOM05D005619 ORTHO05D006696 9.7e-69 264.2 183 69.4
Gorai.010G198200 Gossypium raimondii HOM05D005619 ORTHO05D006696 9.7e-69 264.2 183 69.4
FvH4_7g24440 Fragaria vesca HOM05D005619 ORTHO05D006696 1.3e-68 263.8 187 69.5
Glyma.11G229600 Glycine max HOM05D005619 ORTHO05D006696 1.3e-68 263.8 187 69.0
Potri.010G189200 Populus trichocarpa HOM05D005619 ORTHO05D006696 1.3e-68 263.8 187 71.1
Duzib114G0170 Durio zibethinus HOM05D005619 ORTHO05D006696 1.7e-68 263.5 183 69.4
Sed0003089 Sechium edule HOM05D005619 ORTHO05D006696 1.7e-68 263.5 187 67.9
Lalb_Chr03g0027081 Lupinus albus HOM05D005619 ORTHO05D006696 2.2e-68 263.1 187 69.5
Ciclev10033435m.g Citrus clementina HOM05D005619 ORTHO05D006696 2.8e-68 262.7 171 75.4
RcHm_v2.0_Chr1g0370121 Rosa chinensis HOM05D005619 ORTHO05D006696 2.8e-68 262.7 187 69.5
FAN01G2425 Fragaria x ananassa HOM05D005619 ORTHO05D006696 3.7e-68 262.3 187 69.0
BcaNung05464 Brassica carinata HOM05D005619 ORTHO05D006696 8.2e-68 261.2 187 70.1
CARHR135030 Cardamine hirsuta HOM05D005619 ORTHO05D006696 8.2e-68 261.2 187 70.1
FAN10G0566 Fragaria x ananassa HOM05D005619 ORTHO05D006696 8.2e-68 261.2 187 68.4
DCAR_026757 Daucus carota HOM05D005619 ORTHO05D006696 1.4e-67 260.4 187 69.0
Carub.0005s2221 Capsella rubella HOM05D005619 ORTHO05D006696 1.8e-67 260.0 187 67.4
MD01G1152600 Malus domestica HOM05D005619 ORTHO05D006696 1.8e-67 260.0 187 67.4
A04p30090 Brassica napus HOM05D005619 ORTHO05D006696 2.4e-67 259.6 195 67.7
BraA04t18498Z Brassica rapa HOM05D005619 ORTHO05D006696 3.1e-67 259.2 183 70.5
Eucgr.G03057 Eucalyptus grandis HOM05D005619 ORTHO05D006696 7.0e-67 258.1 187 67.9
PGR142G0483 Punica granatum HOM05D005619 ORTHO05D006696 9.1e-67 257.7 187 66.8
Oeu057772.1 Olea europaea HOM05D005619 ORTHO05D006696 2.0e-66 256.5 186 69.4
Sp4g22380 Schrenkiella parvula HOM05D005619 ORTHO05D006696 2.7e-66 256.1 183 68.9
BolC4t28280H Brassica oleracea HOM05D005619 ORTHO05D006696 4.5e-66 255.4 182 70.3
CiPaw.02G192300 Carya illinoinensis HOM05D000781 ORTHO05D000643 7.7e-66 254.6 179 69.8
BcaC02g07350 Brassica carinata HOM05D005619 ORTHO05D006696 1.7e-65 253.4 182 70.3
HanXRQChr15g0468911 Helianthus annuus HOM05D005619 ORTHO05D006696 2.2e-65 253.1 184 67.9
C04p67770 Brassica napus HOM05D005619 ORTHO05D006696 3.8e-65 252.3 182 69.8
HanXRQChr08g0213181 Helianthus annuus HOM05D005619 ORTHO05D006696 6.5e-65 251.5 184 67.4
MSTRG.870 Avicennia marina HOM05D005619 ORTHO05D006696 8.5e-65 251.1 186 67.7
ClCG11G006160 Citrullus lanatus HOM05D005619 ORTHO05D006696 8.5e-65 251.1 187 66.3
CiPaw.08G091200 Carya illinoinensis HOM05D005619 ORTHO05D006696 3.2e-64 249.2 187 65.8
ECA233G2873 Erigeron canadensis HOM05D005619 ORTHO05D006696 2.1e-63 246.5 184 65.8
Lsat_1_v5_gn_8_41961 Lactuca sativa HOM05D005619 ORTHO05D006696 4.7e-63 245.4 184 66.3
SalBow8G4625 Salvia bowleyana HOM05D005619 ORTHO05D006696 1.0e-62 244.2 186 64.5
HanXRQChr09g0271791 Helianthus annuus HOM05D005619 ORTHO05D006696 4.0e-62 242.3 184 64.7
SGA_v2.0_scaffold170G38815 Striga asiatica HOM05D005619 ORTHO05D006696 5.2e-62 241.9 186 64.0
Migut.E00386 Erythranthe guttata HOM05D005619 ORTHO05D006696 8.8e-62 241.1 186 63.4
Lalb_Chr01g0004131 Lupinus albus HOM05D005619 ORTHO05D006696 1.2e-61 240.7 208 60.1
Cc03_g10740 Coffea canephora HOM05D005619 ORTHO05D006696 2.6e-61 239.6 186 65.1
SMO356G0622 Selaginella moellendorffii HOM05D005619 ORTHO05D006696 7.5e-61 238.0 184 60.3
Peaxi162Scf00451g00930 Petunia axillaris HOM05D005619 ORTHO05D006696 9.8e-61 237.7 186 64.0
unitig_52.g17125 Utricularia gibba HOM05D005619 ORTHO05D006696 1.3e-60 237.3 185 63.8
BcaC02g07392 Brassica carinata HOM05D005619 ORTHO05D006696 2.8e-60 236.1 168 71.4
ECA247G2146 Erigeron canadensis HOM05D005619 ORTHO05D006696 3.7e-60 235.7 184 63.0
Solyc05g008620.4 Solanum lycopersicum HOM05D005619 ORTHO05D006696 8.3e-60 234.6 187 62.6
CAN.G1489.22 Capsicum annuum HOM05D005619 ORTHO05D006696 1.1e-59 234.2 186 63.4
PGSC0003DMG400030566 Solanum tuberosum HOM05D005619 ORTHO05D006696 1.8e-59 233.4 186 62.4
Sopen05g004460 Solanum pennellii HOM05D005619 ORTHO05D006696 3.1e-59 232.6 186 62.4
COL.COLO4_25718 Corchorus olitorius HOM05D005619 ORTHO05D006696 7.0e-59 231.5 184 64.1
TWI53G0619 Tripterygium wilfordii HOM05D005619 ORTHO05D006696 5.9e-58 228.4 169 68.0
Mapoly0053s0030 Marchantia polymorpha HOM05D005619 ORTHO05D006696 8.6e-57 224.6 185 55.1
Mapoly0034s0059 Marchantia polymorpha HOM05D005619 ORTHO05D006696 1.9e-56 223.4 183 55.7
CSS0006460 Camellia sinensis var. sinensis HOM05D005619 ORTHO05D006696 6.1e-55 218.4 182 64.8
Pp3c25_12660 Physcomitrium patens HOM05D005619 ORTHO05D006696 2.3e-54 216.5 182 56.0
SalBow8G2997 Salvia bowleyana HOM05D005619 ORTHO05D006696 1.2e-53 214.2 224 53.1
FAN06G3728 Fragaria x ananassa HOM05D005619 ORTHO05D006696 3.1e-51 206.1 148 68.2
DCAR_023625 Daucus carota HOM05D005619 ORTHO05D006696 7.0e-51 204.9 148 67.6
Nitab4.5_0000350g0020 Nicotiana tabacum HOM05D005619 ORTHO05D006696 1.6e-50 203.8 186 58.1
AagrBONN_evm.TU.Sc2ySwM_228.5247 Anthoceros agrestis HOM05D005619 ORTHO05D006696 1.0e-49 201.1 185 52.4
AagrBONN_evm.TU.Sc2ySwM_344.729 Anthoceros agrestis HOM05D005619 ORTHO05D006696 1.9e-48 196.8 183 51.4
Peaxi162Scf00205g01136 Petunia axillaris HOM05D005619 ORTHO05D006696 3.3e-48 196.1 147 66.0
Cc03_g13530 Coffea canephora HOM05D005619 ORTHO05D006696 1.6e-47 193.7 166 60.8
MELO3C029903.2 Cucumis melo HOM05D005619 ORTHO05D006696 4.7e-47 192.2 202 54.0
TWI73G0774 Tripterygium wilfordii HOM05D005619 ORTHO05D006696 1.8e-46 190.3 184 54.9
C04p07340 Brassica napus HOM05D004515 ORTHO05D006013 3.4e-45 186.0 169 62.1
Sabra10G0145900 Salix brachista HOM05D005619 ORTHO05D006696 5.7e-45 185.3 187 56.7
CBR_g38120 Chara braunii HOM05D005619 ORTHO05D006696 1.4e-43 180.6 185 47.0
Nitab4.5_0003886g0110 Nicotiana tabacum HOM05D005619 ORTHO05D006696 7.0e-43 178.3 184 51.6
FAN06G2505 Fragaria x ananassa HOM05D005619 ORTHO05D006696 2.5e-40 169.9 149 60.4
Aa31LG5G19540 Aethionema arabicum HOM05D005619 ORTHO05D006696 6.2e-39 165.2 104 73.1
CARHR159370 Cardamine hirsuta HOM05D005619 ORTHO05D006696 8.0e-39 164.9 113 69.0
ATR0568G146 Amborella trichopoda HOM05D005619 ORTHO05D006696 3.9e-33 146.0 118 61.0
BolC4t22357H Brassica oleracea HOM05D004515 ORTHO05D006013 5.6e-32 142.1 166 49.4
AagrBONN_evm.TU.Sc2ySwM_344.737 Anthoceros agrestis HOM05D005619 ORTHO05D006696 1.1e-30 137.9 104 61.5
Actinidia33632 Actinidia chinensis HOM05D005619 ORTHO05D006696 6.0e-26 122.1 98 66.3
C04p07380 Brassica napus HOM05D005619 ORTHO05D006696 9.9e-21 104.8 133 45.1
BcaB08g35316 Brassica carinata HOM05D005619 ORTHO05D006696 2.2e-20 103.6 72 68.1
Cre06.g251750 Chlamydomonas reinhardtii HOM05D005619 ORTHO05D006696 2.9e-20 103.2 186 31.2
MCO08G248 Micromonas commoda HOM05D005619 ORTHO05D006696 4.1e-19 99.4 167 34.1
HanXRQChr01g0017101 Helianthus annuus HOM05D005619 ORTHO05D006696 1.1e-16 91.3 62 71.0
Thecc.10G017600 Theobroma cacao HOM05D009631 ORTHO05D011824 9.6e-16 88.2 83 57.8
HanXRQChr12g0375531 Helianthus annuus HOM05D005619 ORTHO05D006696 1.2e-13 81.3 73 54.8
Cfa027228 Carpinus fangiana HOM05D005619 ORTHO05D006696 1.1e-11 74.7 175 27.4


User provided reference genes

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