Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0081 Trochodendron aralioides HOM05D007382 ORTHO05D009012 4.2e-107 391.3 193 100.0
Nn2g10574 Nelumbo nucifera HOM05D007382 ORTHO05D009012 2.4e-54 216.1 164 65.9
Hma1.2p1_0111F.1_g053520 Hydrangea macrophylla HOM05D007382 ORTHO05D009012 1.7e-52 209.9 174 62.6
GSVIVG01025574001 Vitis vinifera HOM05D002855 ORTHO05D009676 3.6e-50 202.2 173 59.5
Hma1.2p1_0111F.1_g053480 Hydrangea macrophylla HOM05D007382 ORTHO05D009012 4.7e-50 201.8 174 60.9
Dinv37282 Davidia involucrata HOM05D007382 ORTHO05D009012 3.0e-49 199.1 156 64.7
Nn3g20330 Nelumbo nucifera HOM05D007382 ORTHO05D009012 2.6e-48 196.1 161 62.7
Ciclev10012925m.g Citrus clementina HOM05D007382 ORTHO05D009012 2.2e-47 193.0 159 57.9
CSS0017861 Camellia sinensis var. sinensis HOM05D007382 ORTHO05D009012 4.8e-47 191.8 148 64.2
MBI04_g28758_MAGBIO Magnolia biondii HOM05D007382 ORTHO05D009012 1.1e-46 190.7 181 56.4
MBI04_g38440_MAGBIO Magnolia biondii HOM05D007382 ORTHO05D009012 1.4e-46 190.3 181 56.4
QL07p045887 Quercus lobata HOM05D007382 ORTHO05D009012 1.8e-46 189.9 161 59.6
CiPaw.10G139200 Carya illinoinensis HOM05D007382 ORTHO05D009012 2.4e-46 189.5 171 56.1
Haze_20685 Corylus avellana HOM05D007382 ORTHO05D009012 2.7e-45 186.0 174 54.6
Cfa017470 Carpinus fangiana HOM05D007382 ORTHO05D009012 1.3e-44 183.7 174 54.0
Prupe.6G245200 Prunus persica HOM05D007382 ORTHO05D009012 5.0e-44 181.8 170 55.3
Nitab4.5_0007103g0020 Nicotiana tabacum HOM05D007382 ORTHO05D009012 1.5e-43 180.3 149 56.4
Oeu029114.1 Olea europaea HOM05D007382 ORTHO05D009012 1.2e-42 177.2 170 55.9
Nitab4.5_0000202g0370 Nicotiana tabacum HOM05D007382 ORTHO05D009012 4.7e-42 175.3 149 54.4
Peaxi162Scf00472g00081 Petunia axillaris HOM05D007382 ORTHO05D009012 8.0e-42 174.5 150 56.7
CAN.G435.4 Capsicum annuum HOM05D007382 ORTHO05D009012 2.0e-40 169.9 149 55.7
RcHm_v2.0_Chr3g0468081 Rosa chinensis HOM05D007382 ORTHO05D009012 2.0e-40 169.9 170 52.4
Manes.09G071800 Manihot esculenta HOM05D007382 ORTHO05D009012 3.4e-40 169.1 167 53.3
Sc01g0003740 Simmondsia chinensis HOM05D007382 ORTHO05D009012 3.4e-40 169.1 146 58.9
FvH4_6g14870 Fragaria vesca HOM05D007382 ORTHO05D009012 5.7e-40 168.3 179 49.2
FAN05G3594 Fragaria x ananassa HOM05D007382 ORTHO05D009012 7.5e-40 167.9 171 50.3
Potri.006G216000 Populus trichocarpa HOM05D007382 ORTHO05D009012 9.8e-40 167.5 152 60.5
Cc06_g15490 Coffea canephora HOM05D007382 ORTHO05D009012 1.3e-39 167.2 138 59.4
Eucgr.A01209 Eucalyptus grandis HOM05D007382 ORTHO05D009012 1.3e-39 167.2 153 56.2
Sabra06G0166500 Salix brachista HOM05D007382 ORTHO05D009012 2.8e-39 166.0 153 57.5
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.7e-39 165.6 179 48.0
FAN14G4413 Fragaria x ananassa HOM05D002855 ORTHO05D009012 4.9e-39 165.2 179 48.6
AUR62042292 Chenopodium quinoa HOM05D002855 ORTHO05D009012 1.1e-38 164.1 144 59.0
Duzib093G1372 Durio zibethinus HOM05D007382 ORTHO05D009012 1.8e-38 163.3 122 63.9
FAN09G0189 Fragaria x ananassa HOM05D007382 ORTHO05D009012 1.8e-38 163.3 179 47.5
AUR62036838 Chenopodium quinoa HOM05D007382 ORTHO05D009012 3.1e-38 162.5 166 54.2
Thecc.05G050100 Theobroma cacao HOM05D007382 ORTHO05D009012 3.1e-38 162.5 160 53.8
Ah.08g212080 Amaranthus hybridus HOM05D007382 ORTHO05D009012 7.0e-38 161.4 159 53.5
MD12G1130200 Malus domestica HOM05D007382 ORTHO05D009012 7.0e-38 161.4 167 52.1
EL10Ac7g17270 Beta vulgaris HOM05D007382 ORTHO05D009012 9.1e-38 161.0 186 48.9
MELO3C003080.2 Cucumis melo HOM05D007382 ORTHO05D009012 9.1e-38 161.0 153 54.2
Sopen10g033880 Solanum pennellii HOM05D007382 ORTHO05D009012 1.2e-37 160.6 138 54.3
Migut.J00393 Erythranthe guttata HOM05D007382 ORTHO05D009012 2.7e-37 159.5 154 56.5
CANSAT80G2903 Cannabis sativa HOM05D007382 ORTHO05D009012 5.9e-37 158.3 151 52.3
Hund10951 Selenicereus undatus HOM05D007382 ORTHO05D009012 5.9e-37 158.3 166 51.2
ECA238G1385 Erigeron canadensis HOM05D007382 ORTHO05D009012 1.0e-36 157.5 143 56.6
Solyc10g084440.3 Solanum lycopersicum HOM05D007382 ORTHO05D009012 1.0e-36 157.5 138 53.6
MSTRG.19120 Avicennia marina HOM05D007382 ORTHO05D009012 1.7e-36 156.8 145 56.6
PGSC0003DMG401010988 Solanum tuberosum HOM05D007382 ORTHO05D009012 1.7e-36 156.8 138 52.9
HanXRQChr07g0195861 Helianthus annuus HOM05D007382 ORTHO05D009012 2.9e-36 156.0 158 51.9
CsaV3_4G024470 Cucumis sativus L. HOM05D007382 ORTHO05D009012 3.8e-36 155.6 153 53.6
COL.COLO4_10307 Corchorus olitorius HOM05D007382 ORTHO05D009012 8.6e-36 154.5 152 52.0
Sopen07g005520 Solanum pennellii HOM05D007382 ORTHO05D009012 8.6e-36 154.5 131 58.0
ClCG04G008690 Citrullus lanatus HOM05D007382 ORTHO05D009012 1.9e-35 153.3 152 50.7
SGA_v2.0_scaffold126G33863 Striga asiatica HOM05D007382 ORTHO05D009012 2.5e-35 152.9 140 52.1
Solyc07g014660.3 Solanum lycopersicum HOM05D007382 ORTHO05D009012 3.3e-35 152.5 131 57.3
PGSC0003DMG400038088 Solanum tuberosum HOM05D007382 ORTHO05D009012 3.3e-35 152.5 131 55.0
Lsat_1_v5_gn_2_111101 Lactuca sativa HOM05D007382 ORTHO05D009012 5.5e-35 151.8 163 49.1
Lsat_1_v5_gn_2_110741 Lactuca sativa HOM05D007382 ORTHO05D009012 1.2e-34 150.6 163 49.1
Ca_08808_v3 Cicer arietinum L. HOM05D007382 ORTHO05D009012 1.6e-34 150.2 151 49.0
ATR0709G053 Amborella trichopoda HOM05D007382 ORTHO05D009012 2.8e-34 149.4 132 56.8
Sed0019756 Sechium edule HOM05D007382 ORTHO05D009012 2.8e-34 149.4 142 50.7
Gohir.D04G117000 Gossypium hirsutum HOM05D007382 ORTHO05D009012 6.1e-34 148.3 132 54.5
Gorai.009G421900 Gossypium raimondii HOM05D007382 ORTHO05D009012 6.1e-34 148.3 132 54.5
Gohir.A04G077800 Gossypium hirsutum HOM05D007382 ORTHO05D009012 2.3e-33 146.4 132 54.5
Sopen09g026050 Solanum pennellii HOM05D007382 ORTHO05D009012 2.3e-33 146.4 132 53.0
AL5G39780 Arabidopsis lyrata HOM05D007382 ORTHO05D009012 6.8e-33 144.8 130 54.6
PSO384G2862 Papaver somniferum HOM05D007382 ORTHO05D009012 6.8e-33 144.8 185 44.9
Aa31LG10G12820 Aethionema arabicum HOM05D007382 ORTHO05D009012 1.5e-32 143.7 130 56.2
CDE05G2022 Ceratophyllum demersum HOM05D007382 ORTHO05D009012 1.5e-32 143.7 147 52.4
Lsat_1_v5_gn_2_110841 Lactuca sativa HOM05D007382 ORTHO05D009012 1.5e-32 143.7 163 47.2
CARHR168440 Cardamine hirsuta HOM05D007382 ORTHO05D009012 2.6e-32 142.9 126 53.2
Glyma.19G176400 Glycine max HOM05D007382 ORTHO05D009012 4.4e-32 142.1 154 51.9
HanXRQChr10g0297271 Helianthus annuus HOM05D007382 ORTHO05D009012 5.7e-32 141.7 158 46.8
PGSC0003DMG400037466 Solanum tuberosum HOM05D007382 ORTHO05D009012 5.7e-32 141.7 131 51.9
Glyma.03G175900 Glycine max HOM05D007382 ORTHO05D009012 7.5e-32 141.4 152 48.7
BcaC02g09988 Brassica carinata HOM05D007382 ORTHO05D009012 9.8e-32 141.0 131 55.0
TWI77G0838 Tripterygium wilfordii HOM05D007382 ORTHO05D009012 9.8e-32 141.0 133 54.9
Carub.0005s2494 Capsella rubella HOM05D007382 ORTHO05D009012 3.7e-31 139.0 130 52.3
Sp5g04630 Schrenkiella parvula HOM05D007382 ORTHO05D009012 3.7e-31 139.0 134 51.5
Sed0025265 Sechium edule HOM05D007382 ORTHO05D009012 3.7e-31 139.0 126 54.8
Medtr7g100200 Medicago truncatula HOM05D007382 ORTHO05D009012 6.3e-31 138.3 152 46.1
Phvul.001G173000 Phaseolus vulgaris HOM05D007382 ORTHO05D009012 8.3e-31 137.9 141 50.4
Psat7g058560 Pisum sativum HOM05D007382 ORTHO05D009012 1.4e-30 137.1 141 49.6
BcaB02g08277 Brassica carinata HOM05D007382 ORTHO05D009012 5.4e-30 135.2 133 51.9
VMungo1383G3160 Vigna mungo HOM05D007382 ORTHO05D009012 5.4e-30 135.2 152 46.1
Aqoxy5G00351 Aquilegia oxysepala HOM05D007382 ORTHO05D009012 1.2e-29 134.0 134 52.2
CiPaw.15G123900 Carya illinoinensis HOM05D007382 ORTHO05D009012 1.6e-29 133.7 145 47.6
Medtr7g100230 Medicago truncatula HOM05D007382 ORTHO05D009012 1.6e-29 133.7 157 43.9
TPR.G21464 Trifolium pratense HOM05D007382 ORTHO05D009012 7.8e-29 131.3 183 41.5
AT3G58090 Arabidopsis thaliana HOM05D000180 ORTHO05D000099 2.9e-28 129.4 116 53.4
Zm00001eb148770 Zea mays HOM05D007382 ORTHO05D009012 5.0e-28 128.6 138 48.6
C04p34300 Brassica napus HOM05D000180 ORTHO05D000099 1.9e-27 126.7 117 55.6
BolC4t24990H Brassica oleracea HOM05D000180 ORTHO05D000099 4.3e-27 125.6 117 55.6
A04p02730 Brassica napus HOM05D000180 ORTHO05D000099 6.1e-26 121.7 110 56.4
BraA04t15999Z Brassica rapa HOM05D000180 ORTHO05D000099 6.1e-26 121.7 110 56.4
Lj1g0005181 Lotus japonicus HOM05D007382 ORTHO05D009012 6.1e-26 121.7 124 48.4
AUR62043938 Chenopodium quinoa HOM05D002855 ORTHO05D004406 8.9e-25 117.9 136 48.5
Os01g0835600 Oryza sativa ssp. japonica HOM05D007382 ORTHO05D009012 4.4e-24 115.5 163 41.1
HPP92_019795 Vanilla planifolia HOM05D007382 ORTHO05D009012 9.8e-24 114.4 117 47.0
SEGI_34495 Sequoiadendron giganteum HOM05D007382 ORTHO05D009012 8.3e-23 111.3 163 42.3
unitig_744.g24666 Utricularia gibba HOM05D007382 ORTHO05D009012 6.0e-21 105.1 142 42.3
PGSC0003DMG400035622 Solanum tuberosum HOM05D007382 ORTHO05D009012 4.3e-19 99.0 107 43.9
VMungo1080G1211 Vigna mungo HOM05D007382 ORTHO05D009012 9.5e-19 97.8 68 61.8
Lalb_Chr25g0289341 Lupinus albus HOM05D007382 ORTHO05D009012 6.8e-17 91.7 91 52.7
CDE09G1151 Ceratophyllum demersum HOM05D007382 ORTHO05D009012 8.9e-17 91.3 135 38.5
Lalb_Chr20g0113021 Lupinus albus HOM05D007382 ORTHO05D009012 8.9e-17 91.3 199 32.2
CDE12G0689 Ceratophyllum demersum HOM05D007382 ORTHO05D009012 1.7e-12 77.0 91 40.7
SEGI_03776 Sequoiadendron giganteum HOM05D016889 ORTHO05D009012 3.6e-10 69.3 53 58.5
ATR0829G079 Amborella trichopoda HOM05D016889 ORTHO05D026570 6.2e-10 68.6 61 55.7
ATR0665G317 Amborella trichopoda HOM05D007382 ORTHO05D009012 1.1e-09 67.8 56 57.1
CBR_g41746 Chara braunii HOM05D007382 ORTHO05D009012 1.1e-09 67.8 104 37.5
SMO147G0006 Selaginella moellendorffii HOM05D016889 ORTHO05D026570 1.5e-08 63.9 97 38.1
COL.COLO4_19275 Corchorus olitorius HOM05D001312 ORTHO05D001832 3.4e-08 62.8 130 37.7
TAR633G0943 Trochodendron aralioides HOM05D007382 ORTHO05D009012 9.9e-08 61.2 104 35.6
Thecc.09G293200 Theobroma cacao HOM05D001312 ORTHO05D001832 1.1e-06 57.8 66 50.0
Pp3c14_21840 Physcomitrium patens HOM05D016889 ORTHO05D009012 3.2e-06 56.2 55 52.7
SEGI_22784 Sequoiadendron giganteum HOM05D016889 ORTHO05D009012 3.2e-06 56.2 50 48.0


User provided reference genes

Program Settings