Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 2.5e-133 478.8 243 100.0
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 2.0e-98 362.8 258 74.4
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 5.8e-98 361.3 260 74.6
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 3.8e-97 358.6 263 73.0
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 6.4e-97 357.8 258 74.8
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 1.2e-95 353.6 262 72.5
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 1.6e-95 353.2 260 74.2
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 6.0e-95 351.3 266 72.2
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 6.0e-95 351.3 262 72.5
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 1.3e-94 350.1 255 72.2
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 5.1e-94 348.2 263 72.6
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 1.5e-93 346.7 268 71.3
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 5.6e-93 344.7 213 81.7
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 9.6e-93 344.0 262 72.1
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 9.6e-93 344.0 281 69.0
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 2.8e-92 342.4 181 91.7
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 8.1e-92 340.9 244 72.5
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 1.1e-91 340.5 178 92.1
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 1.4e-91 340.1 266 70.7
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 5.3e-91 338.2 241 73.9
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 5.3e-91 338.2 241 74.7
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 9.0e-91 337.4 180 90.0
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 9.0e-91 337.4 254 69.7
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 1.5e-90 336.7 249 71.5
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 2.0e-90 336.3 254 70.1
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 7.6e-90 334.3 255 69.4
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 7.6e-90 334.3 252 70.6
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 2.2e-89 332.8 246 71.5
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 2.9e-89 332.4 181 87.3
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 4.9e-89 331.6 257 68.9
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 4.9e-89 331.6 251 69.3
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 6.4e-89 331.3 253 70.4
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 1.1e-88 330.5 267 67.8
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 1.4e-88 330.1 280 66.4
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 1.4e-88 330.1 177 91.0
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 1.9e-88 329.7 181 87.8
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 2.4e-88 329.3 251 68.9
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 9.3e-88 327.4 257 68.5
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 9.3e-88 327.4 261 70.1
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 1.2e-87 327.0 257 67.7
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 1.6e-87 326.6 255 69.8
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 3.5e-87 325.5 248 70.6
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 7.9e-87 324.3 241 71.4
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 7.9e-87 324.3 241 71.4
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 7.9e-87 324.3 178 87.6
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 1.0e-86 323.9 249 69.9
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 1.0e-86 323.9 186 86.0
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 1.3e-86 323.6 178 88.2
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 1.8e-86 323.2 254 67.7
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 1.5e-85 320.1 254 67.7
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 1.9e-85 319.7 251 68.5
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 1.6e-84 316.6 178 84.8
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 2.1e-84 316.2 247 67.6
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 3.7e-84 315.5 261 67.4
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 4.8e-84 315.1 257 66.5
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 6.2e-84 314.7 242 69.4
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 6.2e-84 314.7 190 81.1
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 8.1e-84 314.3 246 68.7
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 1.4e-83 313.5 280 63.6
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 1.8e-83 313.2 238 68.5
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 3.1e-83 312.4 245 68.6
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 9.0e-83 310.8 251 67.7
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 1.5e-82 310.1 187 82.4
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 2.0e-82 309.7 258 64.7
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 2.0e-82 309.7 262 66.0
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 3.8e-81 305.4 226 69.9
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 4.9e-81 305.1 262 64.5
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 1.1e-80 303.9 240 67.9
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 9.3e-80 300.8 177 81.4
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 2.7e-79 299.3 177 81.4
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 4.6e-79 298.5 253 66.0
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 7.9e-79 297.7 213 74.2
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 1.0e-78 297.4 178 79.2
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 9.6e-77 290.8 242 64.9
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 3.7e-76 288.9 251 65.3
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 3.7e-76 288.9 226 70.4
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 4.8e-76 288.5 255 62.7
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 6.2e-76 288.1 191 70.7
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 1.2e-74 283.9 187 75.4
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 2.0e-74 283.1 213 69.5
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 6.5e-73 278.1 273 60.4
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 6.5e-73 278.1 257 61.1
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 3.3e-69 265.8 178 74.7
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 3.4e-66 255.8 256 55.9
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 4.5e-66 255.4 178 69.1
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 2.5e-64 249.6 182 67.0
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 7.2e-64 248.1 208 68.3
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 6.1e-63 245.0 201 62.2
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 6.3e-60 235.0 199 66.3
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 1.2e-58 230.7 123 91.9
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 5.9e-58 228.4 125 88.8
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 8.2e-52 208.0 128 78.1
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 1.7e-49 200.3 170 62.9
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 6.7e-46 188.3 182 55.5
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 2.0e-42 176.8 180 53.3
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 2.9e-41 172.9 94 86.2
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 9.1e-35 151.4 129 63.6
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 8.0e-31 138.3 75 88.0
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 2.0e-26 123.6 65 87.7
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 1.4e-19 100.9 58 84.5
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 1.9e-11 73.9 53 66.0


User provided reference genes

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