Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR369G0011 Trochodendron aralioides HOM05D002569 ORTHO05D006728 3.1e-122 441.8 224 100.0
Nn7g36161 Nelumbo nucifera HOM05D002569 ORTHO05D006728 1.0e-96 357.1 218 81.2
Aqoxy7G03862 Aquilegia oxysepala HOM05D002569 ORTHO05D006728 7.0e-82 307.8 221 73.3
MBI19_g25424_MAGBIO Magnolia biondii HOM05D002569 ORTHO05D006728 1.0e-77 293.9 218 70.2
Dinv22194 Davidia involucrata HOM05D002569 ORTHO05D006728 7.5e-76 287.7 226 67.3
CDE05G2349 Ceratophyllum demersum HOM05D002569 ORTHO05D006728 9.8e-76 287.3 218 66.1
PSO339G1449 Papaver somniferum HOM05D002569 ORTHO05D006728 2.9e-75 285.8 221 70.6
PSO384G3146 Papaver somniferum HOM05D002569 ORTHO05D006728 6.4e-75 284.6 227 67.0
Rhsim13G0223300 Rhododendron simsii HOM05D002569 ORTHO05D006728 4.3e-71 271.9 225 63.6
CSS0021823 Camellia sinensis var. sinensis HOM05D002569 ORTHO05D006728 6.2e-70 268.1 224 64.3
Sc09g0000580 Simmondsia chinensis HOM05D002569 ORTHO05D006728 8.1e-70 267.7 221 67.0
CSS0039826 Camellia sinensis var. sinensis HOM05D002569 ORTHO05D006728 8.9e-69 264.2 225 63.6
Hund07528 Selenicereus undatus HOM05D002569 ORTHO05D006728 3.4e-68 262.3 219 64.8
HPP92_006144 Vanilla planifolia HOM05D002569 ORTHO05D006728 1.0e-64 250.8 218 62.4
Cpa.g.sc84.73 Carica papaya HOM05D002569 ORTHO05D006728 3.0e-64 249.2 268 54.9
Atru.chr3.2604 Acer truncatum HOM05D002569 ORTHO05D006728 5.1e-64 248.4 246 57.3
Actinidia16317 Actinidia chinensis HOM05D002569 ORTHO05D006728 8.1e-62 241.1 263 54.0
EL10Ac4g10295 Beta vulgaris HOM05D002569 ORTHO05D006728 1.8e-61 240.0 226 59.7
Nn2g15443 Nelumbo nucifera HOM05D002569 ORTHO05D006728 2.6e-60 236.1 185 67.6
Gohir.A05G068400 Gossypium hirsutum HOM05D002569 ORTHO05D006728 3.4e-60 235.7 237 57.8
Manes.14G001500 Manihot esculenta HOM05D002569 ORTHO05D006728 1.3e-59 233.8 265 55.5
COL.COLO4_24854 Corchorus olitorius HOM05D002569 ORTHO05D006728 1.7e-59 233.4 258 53.9
PGR119G1481 Punica granatum HOM05D002569 ORTHO05D006728 1.7e-59 233.4 258 53.5
Lsat_1_v5_gn_6_47261 Lactuca sativa HOM05D002569 ORTHO05D006728 2.2e-59 233.0 242 57.0
Gorai.009G072400 Gossypium raimondii HOM05D002569 ORTHO05D006728 4.9e-59 231.9 240 56.2
Cfa009745 Carpinus fangiana HOM05D002569 ORTHO05D006728 8.4e-59 231.1 292 49.0
Lalb_Chr14g0372161 Lupinus albus HOM05D002569 ORTHO05D006728 1.4e-58 230.3 221 57.0
CAN.G288.3 Capsicum annuum HOM05D002569 ORTHO05D006728 1.9e-58 229.9 242 57.0
Haze_23104 Corylus avellana HOM05D002569 ORTHO05D006728 1.9e-58 229.9 292 48.3
Carub.0006s1797 Capsella rubella HOM05D002569 ORTHO05D006728 2.4e-58 229.6 271 50.9
Eucgr.J00787 Eucalyptus grandis HOM05D002569 ORTHO05D006728 2.4e-58 229.6 253 56.1
arahy.Tifrunner.gnm1.ann1.IW7M0D Arachis hypogaea HOM05D002569 ORTHO05D006728 7.1e-58 228.0 235 56.2
arahy.Tifrunner.gnm1.ann1.VAJP8X Arachis hypogaea HOM05D002569 ORTHO05D006728 7.1e-58 228.0 235 56.2
TPR.G6861 Trifolium pratense HOM05D002569 ORTHO05D006728 7.1e-58 228.0 223 57.4
HanXRQChr17g0534151 Helianthus annuus HOM05D002569 ORTHO05D006728 9.2e-58 227.6 245 55.5
Haze_23108 Corylus avellana HOM05D002569 ORTHO05D006728 2.7e-57 226.1 302 46.7
AT5G19620 Arabidopsis thaliana HOM05D002569 ORTHO05D006728 3.5e-57 225.7 269 50.6
MD03G1024500 Malus domestica HOM05D002569 ORTHO05D006728 1.0e-56 224.2 247 54.7
Sabra03G0151500 Salix brachista HOM05D002569 ORTHO05D006728 1.3e-56 223.8 247 55.1
ECA233G6009 Erigeron canadensis HOM05D002569 ORTHO05D006728 1.7e-56 223.4 232 57.8
Thhalv10012770m.g Eutrema salsugineum HOM05D002569 ORTHO05D006728 1.7e-56 223.4 275 48.7
Psat5g287000 Pisum sativum HOM05D002569 ORTHO05D006728 1.7e-56 223.4 221 57.9
Potri.003G204900 Populus trichocarpa HOM05D002569 ORTHO05D006728 1.7e-56 223.4 244 55.7
Medtr2g098110 Medicago truncatula HOM05D002569 ORTHO05D006728 2.3e-56 223.0 220 57.3
Ca_01289_v3 Cicer arietinum L. HOM05D002569 ORTHO05D006728 3.0e-56 222.6 225 59.1
Ciclev10030987m.g Citrus clementina HOM05D002569 ORTHO05D006728 3.0e-56 222.6 160 73.8
Thecc.09G228700 Theobroma cacao HOM05D002569 ORTHO05D006728 6.6e-56 221.5 260 51.9
arahy.Tifrunner.gnm1.ann1.24VX5E Arachis hypogaea HOM05D002569 ORTHO05D006728 8.6e-56 221.1 232 56.9
BraA10t44083Z Brassica rapa HOM05D002569 ORTHO05D006728 8.6e-56 221.1 269 49.1
CARHR193290 Cardamine hirsuta HOM05D002569 ORTHO05D006728 8.6e-56 221.1 273 48.4
Phvul.L010043 Phaseolus vulgaris HOM05D002569 ORTHO05D006728 1.1e-55 220.7 224 56.7
C09p56560 Brassica napus HOM05D002569 ORTHO05D006728 1.5e-55 220.3 270 48.9
AL6G31130 Arabidopsis lyrata HOM05D002569 ORTHO05D006728 1.9e-55 219.9 152 75.0
BolC9t58521H Brassica oleracea HOM05D002569 ORTHO05D006728 1.9e-55 219.9 270 48.9
VMungo1080G1486 Vigna mungo HOM05D002569 ORTHO05D006728 1.9e-55 219.9 224 56.2
A10p20090 Brassica napus HOM05D002569 ORTHO05D006728 2.5e-55 219.5 269 48.7
Duzib150G1640 Durio zibethinus HOM05D002569 ORTHO05D006728 3.3e-55 219.2 255 52.2
Solyc11g062070.3 Solanum lycopersicum HOM05D002569 ORTHO05D006728 3.3e-55 219.2 246 54.1
Sopen11g024050 Solanum pennellii HOM05D002569 ORTHO05D006728 3.3e-55 219.2 246 54.5
PGSC0003DMG400008142 Solanum tuberosum HOM05D002569 ORTHO05D006728 4.3e-55 218.8 249 51.8
arahy.Tifrunner.gnm1.ann1.89IDD9 Arachis hypogaea HOM05D002569 ORTHO05D006728 5.6e-55 218.4 232 56.9
BcaC04g24225 Brassica carinata HOM05D002569 ORTHO05D006728 9.6e-55 217.6 269 49.4
THA.LOC104799090 Tarenaya hassleriana HOM05D002569 ORTHO05D006728 9.6e-55 217.6 191 63.4
Lj1A347T9 Lonicera japonica HOM05D002569 ORTHO05D006728 2.1e-54 216.5 248 52.0
QL01p005206 Quercus lobata HOM05D002569 ORTHO05D006728 2.8e-54 216.1 272 49.3
Sopen10g029940 Solanum pennellii HOM05D002569 ORTHO05D006728 2.8e-54 216.1 250 54.0
Solyc10g079290.2 Solanum lycopersicum HOM05D002569 ORTHO05D006728 1.1e-53 214.2 250 52.8
Prupe.6G023900 Prunus persica HOM05D002569 ORTHO05D006728 1.4e-53 213.8 261 51.7
Lj3g0027520 Lotus japonicus HOM05D002569 ORTHO05D006728 3.1e-53 212.6 225 54.7
FAN17G2435 Fragaria x ananassa HOM05D002569 ORTHO05D006728 5.2e-53 211.8 226 54.0
MD11G1029600 Malus domestica HOM05D002569 ORTHO05D006728 6.8e-53 211.5 247 53.0
FAN21G0039 Fragaria x ananassa HOM05D002569 ORTHO05D006728 8.9e-53 211.1 228 53.9
Potri.001G019000 Populus trichocarpa HOM05D002569 ORTHO05D006728 8.9e-53 211.1 249 51.8
ATR0605G270 Amborella trichopoda HOM05D002569 ORTHO05D006728 1.2e-52 210.7 154 72.1
CiPaw.13G163000 Carya illinoinensis HOM05D002569 ORTHO05D006728 1.5e-52 210.3 305 44.9
FAN16G0653 Fragaria x ananassa HOM05D002569 ORTHO05D006728 2.0e-52 209.9 229 54.6
FAN25G0456 Fragaria x ananassa HOM05D002569 ORTHO05D006728 2.0e-52 209.9 229 53.7
Migut.D00584 Erythranthe guttata HOM05D002569 ORTHO05D006728 3.4e-52 209.1 247 55.1
Glyma.13G340700 Glycine max HOM05D002569 ORTHO05D006728 5.8e-52 208.4 112 90.2
Glyma.15G033700 Glycine max HOM05D002569 ORTHO05D006728 5.8e-52 208.4 112 90.2
AUR62019274 Chenopodium quinoa HOM05D002569 ORTHO05D006728 7.6e-52 208.0 116 88.8
FAN11G1818 Fragaria x ananassa HOM05D002569 ORTHO05D006728 7.6e-52 208.0 228 53.1
DCAR_018962 Daucus carota HOM05D002569 ORTHO05D006728 1.7e-51 206.8 270 48.5
vmacro04197 Vaccinium macrocarpon HOM05D002569 ORTHO05D006728 1.7e-51 206.8 313 44.4
Aa31LG1G18950 Aethionema arabicum HOM05D002569 ORTHO05D006728 3.8e-51 205.7 190 61.1
ClCG02G023340 Citrullus lanatus HOM05D002569 ORTHO05D006728 4.9e-51 205.3 241 52.3
CsaV3_4G024160 Cucumis sativus L. HOM05D002569 ORTHO05D006728 4.9e-51 205.3 242 52.9
Sp6g24770 Schrenkiella parvula HOM05D002569 ORTHO05D006728 8.4e-51 204.5 122 81.1
RcHm_v2.0_Chr5g0077091 Rosa chinensis HOM05D002569 ORTHO05D006728 1.1e-50 204.1 230 52.6
CANSAT54G1339 Cannabis sativa HOM05D002569 ORTHO05D006728 1.4e-50 203.8 125 81.6
Sed0019540 Sechium edule HOM05D002569 ORTHO05D006728 1.4e-50 203.8 249 48.6
SGA_v2.0_scaffold247G44859 Striga asiatica HOM05D002569 ORTHO05D006728 1.4e-50 203.8 248 52.0
MELO3C014605.2 Cucumis melo HOM05D002569 ORTHO05D006728 2.4e-50 203.0 246 51.2
SalBow8G4903 Salvia bowleyana HOM05D002569 ORTHO05D006728 2.7e-49 199.5 245 51.8
Gohir.A08G013300 Gossypium hirsutum HOM05D002569 ORTHO05D006728 6.6e-48 194.9 232 51.7
Gohir.D08G023700 Gossypium hirsutum HOM05D002569 ORTHO05D006728 1.5e-47 193.7 232 49.6
Gorai.004G019000 Gossypium raimondii HOM05D002569 ORTHO05D006728 3.3e-47 192.6 248 47.2
Duzib170G0706 Durio zibethinus HOM05D002569 ORTHO05D006728 4.3e-47 192.2 276 46.7
Zm00001eb236320 Zea mays HOM05D002569 ORTHO05D006728 1.3e-46 190.7 118 78.8
Os02g0196300 Oryza sativa ssp. japonica HOM05D002569 ORTHO05D006728 3.1e-45 186.0 138 68.1
Nitab4.5_0000492g0100 Nicotiana tabacum HOM05D002569 ORTHO05D006728 7.9e-41 171.4 241 47.7
Nitab4.5_0002026g0040 Nicotiana tabacum HOM05D002569 ORTHO05D006728 3.9e-40 169.1 237 48.1
Mapoly0001s0065 Marchantia polymorpha HOM05D002569 ORTHO05D006728 5.1e-40 168.7 209 46.4
SMO351G0337 Selaginella moellendorffii HOM05D002569 ORTHO05D006728 3.3e-39 166.0 151 56.3
AUR62000100 Chenopodium quinoa HOM05D002569 ORTHO05D006728 9.6e-39 164.5 88 87.5
AagrBONN_evm.TU.Sc2ySwM_117.1129 Anthoceros agrestis HOM05D002569 ORTHO05D006728 6.9e-37 158.3 110 64.5
Pp3c3_3200 Physcomitrium patens HOM05D002569 ORTHO05D006728 3.8e-35 152.5 148 53.4
CBR_g49553 Chara braunii HOM05D002569 ORTHO05D006728 2.1e-33 146.7 136 52.9
Peaxi162Scf00029g02913 Petunia axillaris HOM05D002569 ORTHO05D006728 3.5e-33 146.0 240 43.8
PRCOL_00003853 Prasinoderma coloniale HOM05D002569 ORTHO05D006728 7.4e-23 111.7 111 52.3
GSVIVG01025300001 Vitis vinifera HOM05D002569 ORTHO05D006728 1.0e-19 101.3 47 95.7
Cc07_g19440 Coffea canephora HOM05D002569 ORTHO05D006728 1.7e-19 100.5 47 93.6
SMO351G0403 Selaginella moellendorffii HOM05D002569 ORTHO05D006728 6.7e-16 88.6 122 42.6
Cre09.g388097 Chlamydomonas reinhardtii HOM05D002569 ORTHO05D006728 1.6e-14 84.0 105 43.8
Ciclev10014959m.g Citrus clementina HOM05D002569 ORTHO05D006728 7.9e-09 65.1 32 81.2
SEGI_36184 Sequoiadendron giganteum HOM05D002569 ORTHO05D006728 1.5e-07 60.8 32 78.1


User provided reference genes

Program Settings