Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 3.0e-148 528.5 267 100.0
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 4.6e-104 381.7 271 76.8
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 2.4e-97 359.4 274 73.7
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 1.8e-92 343.2 278 68.3
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 6.4e-90 334.7 268 70.5
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 7.1e-89 331.3 270 67.8
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 1.6e-88 330.1 268 69.8
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 5.1e-87 325.1 276 67.4
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 8.6e-87 324.3 274 66.4
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 1.9e-86 323.2 283 66.8
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 2.1e-85 319.7 271 67.9
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 2.8e-85 319.3 271 66.1
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 4.7e-85 318.5 272 64.3
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 4.7e-85 318.5 271 64.9
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 8.1e-85 317.8 271 64.9
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 4.0e-84 315.5 271 65.3
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 4.0e-84 315.5 271 65.3
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 8.9e-84 314.3 271 64.9
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 8.9e-84 314.3 283 64.3
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 2.0e-83 313.2 270 67.8
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 4.9e-82 308.5 269 65.4
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 6.4e-82 308.1 273 66.3
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 1.1e-81 307.4 272 65.1
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 1.4e-81 307.0 274 64.6
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 7.1e-81 304.7 279 65.2
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 1.2e-80 303.9 276 63.4
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 2.1e-80 303.1 268 65.7
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 2.1e-80 303.1 279 63.4
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 7.8e-80 301.2 248 66.9
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 9.6e-78 294.3 270 63.3
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.6e-77 293.5 270 63.3
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.1e-76 290.8 273 63.0
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 1.4e-76 290.4 270 63.0
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 2.4e-76 289.7 272 65.1
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 4.4e-75 285.4 273 61.2
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 5.8e-75 285.0 271 60.9
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 3.8e-74 282.3 298 58.1
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 1.1e-73 280.8 273 59.3
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 3.2e-73 279.3 278 60.1
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 1.2e-72 277.3 271 60.5
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 1.6e-72 276.9 256 62.9
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 2.1e-72 276.6 275 62.9
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 4.6e-72 275.4 268 61.6
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 1.3e-71 273.9 268 61.6
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 1.1e-70 270.8 268 60.8
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 3.3e-70 269.2 281 61.2
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 4.3e-70 268.9 276 61.6
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 5.6e-70 268.5 280 60.0
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 1.6e-69 266.9 276 59.8
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 2.8e-69 266.2 272 58.8
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 4.8e-69 265.4 270 59.6
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 1.4e-68 263.8 270 60.4
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 1.4e-68 263.8 267 59.6
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 3.1e-68 262.7 287 58.9
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 3.1e-68 262.7 280 60.7
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 1.2e-67 260.8 277 61.4
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 4.5e-67 258.8 279 58.1
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 8.4e-66 254.6 264 59.1
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 1.4e-65 253.8 296 56.1
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 1.4e-65 253.8 275 58.5
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 5.5e-65 251.9 274 57.7
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 4.6e-64 248.8 251 60.2
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 1.3e-63 247.3 273 57.5
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 3.0e-63 246.1 270 60.7
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 6.7e-63 245.0 269 56.1
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 8.7e-63 244.6 269 62.5
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 9.6e-62 241.1 272 56.6
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 1.3e-61 240.7 240 60.8
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 1.6e-61 240.4 193 71.5
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 2.1e-61 240.0 267 59.6
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 6.2e-61 238.4 273 58.2
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 6.2e-61 238.4 269 54.6
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 1.1e-60 237.7 279 57.3
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 1.4e-60 237.3 272 55.5
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 3.1e-60 236.1 261 57.1
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 3.1e-60 236.1 279 55.9
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 6.9e-60 235.0 268 58.2
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 3.4e-59 232.6 268 57.8
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 4.5e-59 232.3 268 57.8
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 3.8e-58 229.2 262 56.9
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 6.5e-58 228.4 268 57.5
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 1.9e-57 226.9 274 56.2
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 2.1e-56 223.4 283 53.7
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 3.5e-56 222.6 294 52.7
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 2.3e-55 219.9 270 52.2
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 6.7e-55 218.4 262 54.6
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 1.9e-54 216.9 261 54.4
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 9.6e-54 214.5 253 56.9
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 4.5e-51 205.7 257 53.7
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 7.6e-51 204.9 235 58.7
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 1.9e-49 200.3 257 55.6
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 1.9e-49 200.3 172 70.3
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 2.5e-49 199.9 302 48.7
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 3.2e-49 199.5 221 60.2
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 1.6e-48 197.2 231 58.9
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 3.9e-47 192.6 258 51.6
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 2.2e-45 186.8 213 57.3
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 8.2e-45 184.9 257 51.0
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 3.4e-43 179.5 254 50.0
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 7.2e-41 171.8 254 49.6
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 8.8e-39 164.9 169 64.5
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 3.3e-38 162.9 337 40.4
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 9.7e-38 161.4 277 45.1
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 3.1e-36 156.4 238 47.5
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 5.3e-36 155.6 178 59.6
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 1.4e-33 147.5 260 41.9
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 2.0e-30 137.1 111 71.2
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 9.4e-25 118.2 174 48.3
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 6.1e-24 115.5 219 42.9
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 8.0e-24 115.2 96 64.6
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 9.7e-22 108.2 183 45.9
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 3.5e-19 99.8 92 63.0
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 2.9e-18 96.7 81 66.7
Zm00001eb018450 Zea mays HOM05D002674 ORTHO05D007700 6.8e-15 85.5 204 40.7
BcaB07g32361 Brassica carinata HOM05D002674 ORTHO05D007700 1.8e-12 77.4 117 48.7
C05p48610 Brassica napus HOM05D002674 ORTHO05D007700 3.5e-11 73.2 77 55.8
C08p25960 Brassica napus HOM05D002674 ORTHO05D007700 3.5e-11 73.2 77 55.8
BolC1t01853H Brassica oleracea HOM05D002674 ORTHO05D007700 3.8e-10 69.7 77 55.8
BolC9t55650H Brassica oleracea HOM05D002674 ORTHO05D007700 1.1e-09 68.2 69 58.0
C02p42550 Brassica napus HOM05D000186 ORTHO05D015008 1.5e-09 67.8 40 77.5
C02p62500 Brassica napus HOM05D002674 ORTHO05D007700 2.5e-09 67.0 66 57.6
BcaB04g18179 Brassica carinata HOM05D002674 ORTHO05D007700 3.2e-09 66.6 38 78.9
C06p13190 Brassica napus HOM05D002674 ORTHO05D015008 5.5e-09 65.9 40 75.0
A08p09760 Brassica napus HOM05D002674 ORTHO05D007700 1.2e-08 64.7 38 76.3
BraA08t32971Z Brassica rapa HOM05D002674 ORTHO05D007700 1.2e-08 64.7 38 76.3
A09p66240 Brassica napus HOM05D002674 ORTHO05D007700 1.6e-08 64.3 37 78.4
BcaB06g28993 Brassica carinata HOM05D002674 ORTHO05D007700 3.6e-08 63.2 37 78.4
C09p27860 Brassica napus HOM05D002674 ORTHO05D007700 3.6e-08 63.2 69 55.1


User provided reference genes

Program Settings