Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G1153 Trochodendron aralioides HOM05D026595 ORTHO05D003202 8.9e-81 303.5 151 100.0
TAR365G0736 Trochodendron aralioides HOM05D000082 ORTHO05D003202 1.2e-37 160.2 100 76.0
TAR365G0276 Trochodendron aralioides HOM05D000082 ORTHO05D003202 4.6e-37 158.3 100 75.0
Aqoxy2G03449 Aquilegia oxysepala HOM05D000082 ORTHO05D003202 2.7e-21 105.9 103 57.3
MBI11_g35353_MAGBIO Magnolia biondii HOM05D000082 ORTHO05D003202 4.1e-17 92.0 100 52.0
Glyma.20G149700 Glycine max HOM05D003638 ORTHO05D003202 5.3e-17 91.7 106 45.3
Glyma.10G244900 Glycine max HOM05D003638 ORTHO05D003202 9.1e-17 90.9 106 46.2
Dinv18946 Davidia involucrata HOM05D026595 ORTHO05D003202 1.6e-16 90.1 107 47.7
Medtr1g103050 Medicago truncatula HOM05D000082 ORTHO05D003202 1.6e-16 90.1 104 42.3
Psat6g205400 Pisum sativum HOM05D000082 ORTHO05D003202 1.6e-16 90.1 106 43.4
Lj5g0019666 Lotus japonicus HOM05D003638 ORTHO05D003202 4.5e-16 88.6 104 43.3
Phvul.007G061000 Phaseolus vulgaris HOM05D003638 ORTHO05D003202 2.9e-15 85.9 109 44.0
VMungo0720G2634 Vigna mungo HOM05D003638 ORTHO05D003202 6.5e-15 84.7 107 44.9
Dinv05665 Davidia involucrata HOM05D000082 ORTHO05D003202 1.5e-14 83.6 109 45.9
TPR.G26090 Trifolium pratense HOM05D000082 ORTHO05D003202 1.9e-14 83.2 105 40.0
CSS0049983 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D003202 2.5e-14 82.8 110 40.9
CSS0009592 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D003202 3.2e-14 82.4 110 40.9
arahy.Tifrunner.gnm1.ann1.IQ39GT Arachis hypogaea HOM05D003638 ORTHO05D003202 1.2e-13 80.5 106 41.5
Ciclev10005915m.g Citrus clementina HOM05D000082 ORTHO05D003202 1.2e-13 80.5 112 40.2
PSO478G1138 Papaver somniferum HOM05D000082 ORTHO05D003202 8.0e-13 77.8 113 43.4
Atru.chr4.2402 Acer truncatum HOM05D000082 ORTHO05D003202 8.8e-12 74.3 116 43.1
PSO170G0661 Papaver somniferum HOM05D003638 ORTHO05D003202 8.8e-12 74.3 105 41.9
Atru.chr4.2378 Acer truncatum HOM05D000082 ORTHO05D003202 2.0e-11 73.2 116 43.1
CSS0021763 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D003202 2.0e-11 73.2 112 39.3
PSO782G5266 Papaver somniferum HOM05D000082 ORTHO05D003202 2.0e-11 73.2 112 41.1
CSS0023314 Camellia sinensis var. sinensis HOM05D000082 ORTHO05D003202 5.7e-11 71.6 107 42.1
Rhsim04G0198500 Rhododendron simsii HOM05D060634 ORTHO05D003202 9.7e-11 70.9 118 39.8
Ciclev10007103m.g Citrus clementina HOM05D003638 ORTHO05D003202 2.0e-08 63.2 104 33.7
Prupe.1G020100 Prunus persica HOM05D000082 ORTHO05D003202 2.7e-08 62.8 105 35.2
Dinv14038 Davidia involucrata HOM05D002035 ORTHO05D002032 3.5e-08 62.4 85 45.9
HPP92_006121 Vanilla planifolia HOM05D000082 ORTHO05D003202 5.9e-08 61.6 44 54.5
ATR0665G404 Amborella trichopoda HOM05D000082 ORTHO05D003202 1.7e-07 60.1 102 38.2
ECA246G0113 Erigeron canadensis HOM05D000082 ORTHO05D000038 1.5e-06 57.0 67 38.8
HanXRQChr05g0137971 Helianthus annuus HOM05D003638 ORTHO05D003202 1.5e-06 57.0 38 55.3
Nitab4.5_0001555g0090 Nicotiana tabacum HOM05D003638 ORTHO05D003202 1.5e-06 57.0 114 29.8
EL10Ac8g18824 Beta vulgaris HOM05D003638 ORTHO05D003202 1.9e-06 56.6 112 33.0
THA.LOC109116394 Tarenaya hassleriana HOM05D000082 ORTHO05D000038 1.9e-06 56.6 44 47.7
Zm00001eb200510 Zea mays HOM05D000082 ORTHO05D003202 3.2e-06 55.8 49 53.1
AL3G11640 Arabidopsis lyrata HOM05D000082 ORTHO05D000038 4.2e-06 55.5 74 36.5
Lsat_1_v5_gn_8_63100 Lactuca sativa HOM05D003638 ORTHO05D003202 4.2e-06 55.5 112 31.2
PSO729G0222 Papaver somniferum HOM05D000187 ORTHO05D000230 5.5e-06 55.1 59 42.4
Ah.14g078720 Amaranthus hybridus HOM05D003638 ORTHO05D003202 7.2e-06 54.7 116 30.2
ATR0580G457 Amborella trichopoda HOM05D000082 ORTHO05D000038 7.2e-06 54.7 43 44.2
Gohir.A13G203100 Gossypium hirsutum HOM05D003638 ORTHO05D003202 7.2e-06 54.7 106 31.1
Os11g0582100 Oryza sativa ssp. japonica HOM05D000082 ORTHO05D003202 7.2e-06 54.7 49 49.0
Hund09319 Selenicereus undatus HOM05D003638 ORTHO05D003202 7.2e-06 54.7 112 33.9
SEGI_28414 Sequoiadendron giganteum HOM05D000082 ORTHO05D008126 7.2e-06 54.7 72 33.3


User provided reference genes

Program Settings