Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G1029 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.4e-110 402.1 197 100.0
TAR629G2683 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.3e-97 359.0 196 92.3
TAR496G0003 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.7e-55 219.9 122 93.4
CSS0035647 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 4.2e-22 109.0 195 38.5
TAR633G2603 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.4e-20 104.0 194 34.5
Dinv11451 Davidia involucrata HOM05D000576 ORTHO05D000368 3.7e-18 95.9 190 34.7
TAR633G1895 Trochodendron aralioides HOM05D000576 ORTHO05D000368 4.1e-17 92.4 181 35.9
TAR633G2125 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.2e-16 90.9 181 35.4
Dinv29497 Davidia involucrata HOM05D000576 ORTHO05D000368 2.0e-16 90.1 181 33.7
Rhsim02G0214100 Rhododendron simsii HOM05D000576 ORTHO05D000368 2.0e-16 90.1 193 32.1
CSS0001211 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 2.6e-16 89.7 196 30.6
RcHm_v2.0_Chr3g0476161 Rosa chinensis HOM05D000576 ORTHO05D000368 4.5e-16 89.0 205 36.1
CSS0016406 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 5.9e-16 88.6 196 30.6
Glyma.08G297700 Glycine max HOM05D000576 ORTHO05D000368 5.9e-16 88.6 188 33.0
MBI06_g04290_MAGBIO Magnolia biondii HOM05D000576 ORTHO05D000368 6.5e-15 85.1 151 37.7
arahy.Tifrunner.gnm1.ann1.7MIU5M Arachis hypogaea HOM05D000576 ORTHO05D000368 5.5e-14 82.0 143 36.4
Duzib248G0036 Durio zibethinus HOM05D000576 ORTHO05D000368 5.5e-14 82.0 243 27.2
CSS0005465 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 7.2e-14 81.6 215 29.8
Atru.chr4.3172 Acer truncatum HOM05D000576 ORTHO05D000368 9.4e-14 81.3 196 30.1
TAR365G0708 Trochodendron aralioides HOM05D000576 ORTHO05D000368 9.4e-14 81.3 193 33.2
Atru.chr4.3173 Acer truncatum HOM05D000576 ORTHO05D000368 2.7e-13 79.7 196 30.1
vmacro11253 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 3.6e-13 79.3 183 31.1
FAN14G2376 Fragaria x ananassa HOM05D000576 ORTHO05D000368 8.0e-13 78.2 191 33.5
Actinidia31191 Actinidia chinensis HOM05D000576 ORTHO05D000368 1.0e-12 77.8 204 29.9
Ciclev10013373m.g Citrus clementina HOM05D000576 ORTHO05D000368 1.0e-12 77.8 193 28.5
GSVIVG01017697001 Vitis vinifera HOM05D000576 ORTHO05D000368 1.0e-12 77.8 183 31.7
arahy.Tifrunner.gnm1.ann1.X3R901 Arachis hypogaea HOM05D000576 ORTHO05D000368 1.4e-12 77.4 189 30.2
Cc03_g00060 Coffea canephora HOM05D000576 ORTHO05D000368 1.4e-12 77.4 194 29.9
TAR629G0101 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.4e-12 77.4 191 33.5
Rhsim02G0051900 Rhododendron simsii HOM05D000576 ORTHO05D015329 3.9e-12 75.9 176 31.8
Potri.017G092301 Populus trichocarpa HOM05D008175 ORTHO05D000368 5.2e-12 75.5 200 27.5
RcHm_v2.0_Chr2g0167601 Rosa chinensis HOM05D000576 ORTHO05D000368 5.2e-12 75.5 190 33.7
RcHm_v2.0_Chr2g0168251 Rosa chinensis HOM05D000576 ORTHO05D000368 5.2e-12 75.5 192 33.9
Dinv41631 Davidia involucrata HOM05D000576 ORTHO05D000368 6.7e-12 75.1 203 32.5
Aqoxy5G04063 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 1.1e-11 74.3 180 33.3
QL10p004689 Quercus lobata HOM05D000576 ORTHO05D000368 1.1e-11 74.3 193 28.5
QL10p005853 Quercus lobata HOM05D000576 ORTHO05D000368 1.1e-11 74.3 182 31.3
TPR.G33251 Trifolium pratense HOM05D000576 ORTHO05D000368 1.5e-11 73.9 182 30.2
RcHm_v2.0_Chr2g0167641 Rosa chinensis HOM05D000576 ORTHO05D000368 2.6e-11 73.2 193 31.6
Aqoxy4G02514 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 3.3e-11 72.8 182 31.9
FAN19G2457 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.3e-11 72.8 178 32.0
Rhsim05G0090700 Rhododendron simsii HOM05D000576 ORTHO05D015329 3.3e-11 72.8 190 31.1
DCAR_023416 Daucus carota HOM05D000576 ORTHO05D000368 4.4e-11 72.4 194 27.3
Ciclev10031551m.g Citrus clementina HOM05D000576 ORTHO05D000368 7.4e-11 71.6 195 31.3
Prupe.5G181600 Prunus persica HOM05D000576 ORTHO05D000368 7.4e-11 71.6 192 31.8
Sabra17G0081300 Salix brachista HOM05D000576 ORTHO05D000368 7.4e-11 71.6 194 27.8
COL.COLO4_23029 Corchorus olitorius HOM05D000576 ORTHO05D000368 9.7e-11 71.2 180 29.4
Dinv22828 Davidia involucrata HOM05D000576 ORTHO05D000368 9.7e-11 71.2 192 30.2
Rhsim13G0226200 Rhododendron simsii HOM05D000576 ORTHO05D000368 9.7e-11 71.2 275 24.7
RcHm_v2.0_Chr2g0167551 Rosa chinensis HOM05D000576 ORTHO05D000368 2.2e-10 70.1 190 33.2
Aqoxy1G01400 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 2.8e-10 69.7 180 30.6
Ciclev10015410m.g Citrus clementina HOM05D000576 ORTHO05D000368 2.8e-10 69.7 180 33.3
FvH4_1g04270 Fragaria vesca HOM05D000576 ORTHO05D000368 2.8e-10 69.7 178 32.0
Psat4g131160 Pisum sativum HOM05D000576 ORTHO05D000368 2.8e-10 69.7 183 28.4
FvH4_1g04280 Fragaria vesca HOM05D000576 ORTHO05D000368 3.7e-10 69.3 178 32.0
Aqoxy3G00472 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 4.8e-10 68.9 204 30.4
Dinv11146 Davidia involucrata HOM05D000576 ORTHO05D000368 4.8e-10 68.9 180 31.7
Gohir.D08G134100 Gossypium hirsutum HOM05D000576 ORTHO05D000368 4.8e-10 68.9 185 28.1
QL10p005342 Quercus lobata HOM05D000576 ORTHO05D000368 8.2e-10 68.2 198 29.8
FvH4_6g47821 Fragaria vesca HOM05D000576 ORTHO05D000368 1.1e-09 67.8 189 29.6
Migut.C01273 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.4e-09 67.4 187 31.0
TWI77G0108 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.4e-09 67.4 185 29.7
Ciclev10008324m.g Citrus clementina HOM05D000576 ORTHO05D000368 1.8e-09 67.0 185 27.0
COL.COLO4_23025 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.8e-09 67.0 180 29.4
FAN05G3417 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.8e-09 67.0 191 29.8
Medtr8g468470 Medicago truncatula HOM05D000576 ORTHO05D000368 1.8e-09 67.0 184 28.8
Dinv22832 Davidia involucrata HOM05D000576 ORTHO05D000368 3.1e-09 66.2 192 27.1
QL11p001174 Quercus lobata HOM05D000576 ORTHO05D000368 3.1e-09 66.2 178 30.3
TWI63G0051 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 3.1e-09 66.2 192 28.1
Ciclev10020079m.g Citrus clementina HOM05D000576 ORTHO05D000368 4.1e-09 65.9 183 29.5
TWI73G0365 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 4.1e-09 65.9 183 30.6
Rhsim01G0067400 Rhododendron simsii HOM05D000576 ORTHO05D000368 5.3e-09 65.5 183 29.0
Manes.03G198700 Manihot esculenta HOM05D000576 ORTHO05D000368 9.1e-09 64.7 189 30.7
Potri.016G106600 Populus trichocarpa HOM05D016710 ORTHO05D015329 1.2e-08 64.3 182 27.5
TWI18G0091 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.2e-08 64.3 180 27.2
Dinv21743 Davidia involucrata HOM05D000576 ORTHO05D000368 1.6e-08 63.9 185 30.3
Migut.J00273 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.0e-08 63.5 161 31.7
Ciclev10008333m.g Citrus clementina HOM05D000576 ORTHO05D000368 2.6e-08 63.2 189 31.7
Gohir.D08G226100 Gossypium hirsutum HOM05D000576 ORTHO05D000368 2.6e-08 63.2 188 30.3
Gorai.004G240100 Gossypium raimondii HOM05D000576 ORTHO05D000368 2.6e-08 63.2 188 30.3
TWI63G1205 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 2.6e-08 63.2 192 28.6
Dinv38535 Davidia involucrata HOM05D000576 ORTHO05D000368 3.5e-08 62.8 207 32.4
Migut.J00215 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.5e-08 62.8 195 29.2
Gohir.A08G113400 Gossypium hirsutum HOM05D000576 ORTHO05D000368 4.5e-08 62.4 192 25.5
Prupe.3G194200 Prunus persica HOM05D000576 ORTHO05D000368 5.9e-08 62.0 204 30.4
TWI18G0229 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 5.9e-08 62.0 191 31.4
FAN28G2519 Fragaria x ananassa HOM05D000576 ORTHO05D000368 7.7e-08 61.6 181 30.9
Os07g0163200 Oryza sativa ssp. japonica HOM05D000576 ORTHO05D000368 7.7e-08 61.6 196 28.6
TWI63G0411 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 7.7e-08 61.6 197 28.4
FAN14G3739 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.0e-07 61.2 189 29.1
COL.COLO4_14292 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.3e-07 60.8 194 29.4
TWI63G0561 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.3e-07 60.8 194 29.9
RcHm_v2.0_Chr1g0360451 Rosa chinensis HOM05D000576 ORTHO05D000368 1.7e-07 60.5 188 27.7
TWI63G1780 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.7e-07 60.5 191 27.7
QL10p005093 Quercus lobata HOM05D000576 ORTHO05D000368 2.2e-07 60.1 181 28.7
Phvul.003G209900 Phaseolus vulgaris HOM05D000576 ORTHO05D000368 2.9e-07 59.7 182 29.1
SGA_v2.0_scaffold196G40959 Striga asiatica HOM05D000576 ORTHO05D000368 2.9e-07 59.7 192 27.6
Hma1.2p1_0108F.1_g052030 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 3.8e-07 59.3 189 29.6
TWI32G0666 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 3.8e-07 59.3 197 30.5
Migut.G01093 Erythranthe guttata HOM05D000576 ORTHO05D000368 5.0e-07 58.9 137 32.1
Hma1.2p1_0728F.1_g209430 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 5.0e-07 58.9 185 29.2
Actinidia20536 Actinidia chinensis HOM05D000576 ORTHO05D000368 6.5e-07 58.5 203 29.1
RcHm_v2.0_Chr2g0166621 Rosa chinensis HOM05D000576 ORTHO05D000368 6.5e-07 58.5 197 28.9
TWI63G0418 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 6.5e-07 58.5 190 29.5
TAR633G1517 Trochodendron aralioides HOM05D000576 ORTHO05D000368 6.5e-07 58.5 123 30.9
FAN14G0812 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.1e-06 57.8 205 28.3
Os11g0532600 Oryza sativa ssp. japonica HOM05D008868 ORTHO05D000368 1.1e-06 57.8 211 27.5
QL10p004673 Quercus lobata HOM05D000576 ORTHO05D000368 1.1e-06 57.8 185 28.1
Ciclev10008358m.g Citrus clementina HOM05D000576 ORTHO05D000368 1.5e-06 57.4 180 27.2
VMungo1215G3115 Vigna mungo HOM05D000576 ORTHO05D000368 1.5e-06 57.4 180 28.9
CiPaw.10G088400 Carya illinoinensis HOM05D000576 ORTHO05D000368 1.9e-06 57.0 165 28.5
COL.COLO4_14986 Corchorus olitorius HOM05D000576 ORTHO05D000368 2.5e-06 56.6 194 27.8
RcHm_v2.0_Chr7g0191131 Rosa chinensis HOM05D000576 ORTHO05D000368 2.5e-06 56.6 183 29.5
Ciclev10008279m.g Citrus clementina HOM05D000576 ORTHO05D000368 3.2e-06 56.2 192 28.6
Migut.F00694 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.2e-06 56.2 182 28.0
QL10p004694 Quercus lobata HOM05D000576 ORTHO05D000368 3.2e-06 56.2 183 25.7
QL10p040220 Quercus lobata HOM05D000576 ORTHO05D000368 3.2e-06 56.2 196 27.6
Rhsim07G0244200 Rhododendron simsii HOM05D000576 ORTHO05D000368 3.2e-06 56.2 183 29.0
RcHm_v2.0_Chr3g0449591 Rosa chinensis HOM05D000576 ORTHO05D000368 3.2e-06 56.2 188 29.8
CSS0015792 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 4.2e-06 55.8 200 27.0
Ciclev10011606m.g Citrus clementina HOM05D000576 ORTHO05D000368 4.2e-06 55.8 194 29.4
Ciclev10011607m.g Citrus clementina HOM05D000576 ORTHO05D000368 4.2e-06 55.8 194 29.4
QL03p059577 Quercus lobata HOM05D000576 ORTHO05D000368 4.2e-06 55.8 185 29.2
Dinv38537 Davidia involucrata HOM05D000111 ORTHO05D000134 5.5e-06 55.5 193 31.6
FAN20G1480 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.5e-06 55.5 196 26.0
Os04g0479800 Oryza sativa ssp. japonica HOM05D008868 ORTHO05D011164 5.5e-06 55.5 186 26.3
QL10p005864 Quercus lobata HOM05D000576 ORTHO05D000368 5.5e-06 55.5 186 29.0
Dinv38504 Davidia involucrata HOM05D000576 ORTHO05D000368 9.4e-06 54.7 184 28.8
Hma1.2p1_1488F.1_g286620 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 9.4e-06 54.7 175 29.1
SGA_v2.0_scaffold287G47213 Striga asiatica HOM05D000576 ORTHO05D000368 9.4e-06 54.7 183 29.0


User provided reference genes

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