Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G1027 Trochodendron aralioides HOM05D010496 ORTHO05D010879 3.2e-178 628.2 308 100.0
TAR365G0164 Trochodendron aralioides HOM05D003788 ORTHO05D010879 4.3e-74 282.3 302 53.6
Nn1g09760 Nelumbo nucifera HOM05D003788 ORTHO05D010879 6.5e-62 241.9 296 44.9
QL06p027780 Quercus lobata HOM05D010496 ORTHO05D010879 1.2e-39 167.9 303 39.6
Aqoxy2G04009 Aquilegia oxysepala HOM05D003788 ORTHO05D010879 1.5e-37 161.0 295 38.3
Cfa008703 Carpinus fangiana HOM05D010496 ORTHO05D010879 1.4e-35 154.5 304 37.8
GSVIVG01031653001 Vitis vinifera HOM05D010496 ORTHO05D010879 1.7e-33 147.5 314 33.8
Haze_11711 Corylus avellana HOM05D010496 ORTHO05D010879 6.3e-33 145.6 302 36.4
CiPaw.01G109800 Carya illinoinensis HOM05D010496 ORTHO05D010879 3.1e-32 143.3 246 40.7
Prupe.1G176100 Prunus persica HOM05D010496 ORTHO05D010879 3.5e-31 139.8 298 37.2
MD04G1026500 Malus domestica HOM05D010496 ORTHO05D010879 3.3e-29 133.3 276 37.3
RcHm_v2.0_Chr4g0410661 Rosa chinensis HOM05D010496 ORTHO05D010879 3.9e-22 109.8 320 31.2
Gorai.006G226800 Gossypium raimondii HOM05D010496 ORTHO05D010879 8.6e-22 108.6 252 33.3
Duzib151G0883 Durio zibethinus HOM05D010496 ORTHO05D010879 3.3e-21 106.7 234 35.5
Gohir.D09G202900 Gossypium hirsutum HOM05D010496 ORTHO05D010879 4.3e-21 106.3 251 33.5
Gohir.A09G209500 Gossypium hirsutum HOM05D010496 ORTHO05D010879 5.6e-21 105.9 255 34.1
Glyma.10G293200 Glycine max HOM05D011141 ORTHO05D010879 9.5e-21 105.1 265 32.1
arahy.Tifrunner.gnm1.ann1.R8V4SK Arachis hypogaea HOM05D011141 ORTHO05D010879 1.1e-19 101.7 241 32.4
arahy.Tifrunner.gnm1.ann1.P32IB9 Arachis hypogaea HOM05D011141 ORTHO05D010879 2.3e-19 100.5 241 32.0
TPR.G10391 Trifolium pratense HOM05D011141 ORTHO05D010879 2.3e-19 100.5 221 34.4
Medtr1g116100 Medicago truncatula HOM05D011141 ORTHO05D010879 4.0e-19 99.8 229 32.8
Migut.M01579 Erythranthe guttata HOM05D003788 ORTHO05D004633 3.4e-18 96.7 248 32.7
Glyma.20G243300 Glycine max HOM05D011141 ORTHO05D010879 3.4e-18 96.7 297 30.6
ATR0751G208 Amborella trichopoda HOM05D003788 ORTHO05D004633 1.3e-17 94.7 287 30.7
Phvul.007G007000 Phaseolus vulgaris HOM05D011141 ORTHO05D010879 2.9e-17 93.6 231 29.9
THA.LOC104822683 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 6.4e-17 92.4 325 28.9
AUR62026200 Chenopodium quinoa HOM05D007934 ORTHO05D010067 1.9e-16 90.9 198 31.3
SGA_v2.0_scaffold7G03552 Striga asiatica HOM05D003788 ORTHO05D004633 2.4e-16 90.5 205 34.6
AUR62018491 Chenopodium quinoa HOM05D007934 ORTHO05D010879 3.2e-16 90.1 198 30.8
MBI14_g10253_MAGBIO Magnolia biondii HOM05D003788 ORTHO05D004633 5.4e-16 89.4 392 26.3
Thecc.04G186900 Theobroma cacao HOM05D010496 ORTHO05D010879 7.0e-16 89.0 211 33.6
FAN12G2147 Fragaria x ananassa HOM05D010496 ORTHO05D010879 2.1e-15 87.4 290 27.9
FvH4_4g12430 Fragaria vesca HOM05D010496 ORTHO05D010879 4.6e-15 86.3 302 26.8
FAN22G0913 Fragaria x ananassa HOM05D010496 ORTHO05D010879 4.6e-15 86.3 291 28.2
Glyma.10G293000 Glycine max HOM05D011141 ORTHO05D010879 4.6e-15 86.3 229 31.4
Lj2g0022590 Lotus japonicus HOM05D011141 ORTHO05D010879 4.6e-15 86.3 228 31.6
CDE11G0275 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 6.0e-15 85.9 201 35.3
PSO017G0918 Papaver somniferum HOM05D061670 ORTHO05D010879 6.0e-15 85.9 106 43.4
SGA_v2.0_scaffold11G05962 Striga asiatica HOM05D003788 ORTHO05D004633 1.0e-14 85.1 203 35.5
VMungo0720G3183 Vigna mungo HOM05D011141 ORTHO05D010879 1.0e-14 85.1 297 27.6
MBI15_g35998_MAGBIO Magnolia biondii HOM05D003788 ORTHO05D004633 3.0e-14 83.6 357 25.5
Gohir.A08G026000 Gossypium hirsutum HOM05D003788 ORTHO05D004633 3.9e-14 83.2 264 28.8
Nn1g07620 Nelumbo nucifera HOM05D003788 ORTHO05D004633 6.6e-14 82.4 280 29.3
Gohir.D08G036500 Gossypium hirsutum HOM05D003788 ORTHO05D004633 1.9e-13 80.9 264 28.4
GSVIVG01014849001 Vitis vinifera HOM05D003788 ORTHO05D004633 2.5e-13 80.5 209 33.0
MSTRG.16130 Avicennia marina HOM05D003788 ORTHO05D004633 4.3e-13 79.7 251 31.9
Gorai.004G034500 Gossypium raimondii HOM05D003788 ORTHO05D004633 4.3e-13 79.7 222 31.1
PSO675G9246 Papaver somniferum HOM05D061670 ORTHO05D010879 5.6e-13 79.3 106 41.5
FAN07G2091 Fragaria x ananassa HOM05D010496 ORTHO05D010879 9.5e-13 78.6 302 27.2
HPP92_015789 Vanilla planifolia HOM05D003788 ORTHO05D004633 9.5e-13 78.6 240 31.7
Manes.05G204500 Manihot esculenta HOM05D003788 ORTHO05D004633 1.2e-12 78.2 333 27.0
Glyma.20G243200 Glycine max HOM05D011141 ORTHO05D010879 2.1e-12 77.4 229 29.3
TAR626G0610 Trochodendron aralioides HOM05D003788 ORTHO05D004633 2.8e-12 77.0 301 26.9
Ciclev10007254m.g Citrus clementina HOM05D003788 ORTHO05D004633 3.6e-12 76.6 282 28.4
HanXRQChr03g0079411 Helianthus annuus HOM05D003788 ORTHO05D004633 4.7e-12 76.3 210 32.9
THA.LOC104811704 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 4.7e-12 76.3 250 29.6
Thecc.07G001100 Theobroma cacao HOM05D003788 ORTHO05D004633 4.7e-12 76.3 300 28.3
Carub.0008s1657 Capsella rubella HOM05D003788 ORTHO05D004633 1.1e-11 75.1 219 29.2
Cc05_g15760 Coffea canephora HOM05D003788 ORTHO05D004633 1.4e-11 74.7 307 25.7
MSTRG.7044 Avicennia marina HOM05D003788 ORTHO05D004633 1.8e-11 74.3 260 28.5
Duzib268G1743 Durio zibethinus HOM05D003788 ORTHO05D004633 1.8e-11 74.3 309 27.2
Hma1.2p1_0321F.1_g124360 Hydrangea macrophylla HOM05D003788 ORTHO05D004633 1.8e-11 74.3 206 31.6
QL08p000460 Quercus lobata HOM05D003788 ORTHO05D004633 1.8e-11 74.3 375 27.2
BcaB05g22252 Brassica carinata HOM05D003788 ORTHO05D004633 2.3e-11 73.9 222 31.1
BcaC03g14234 Brassica carinata HOM05D003788 ORTHO05D004633 3.1e-11 73.6 206 31.1
C02p15400 Brassica napus HOM05D003788 ORTHO05D004633 3.1e-11 73.6 206 31.1
BolC2t07655H Brassica oleracea HOM05D003788 ORTHO05D004633 3.1e-11 73.6 206 31.1
BraA03t10667Z Brassica rapa HOM05D003788 ORTHO05D004633 3.1e-11 73.6 219 30.1
Sed0016606 Sechium edule HOM05D010496 ORTHO05D010879 3.1e-11 73.6 199 30.2
unitig_37.g12213 Utricularia gibba HOM05D003788 ORTHO05D004633 3.1e-11 73.6 279 28.7
Dinv19640 Davidia involucrata HOM05D003788 ORTHO05D004633 4.0e-11 73.2 286 28.3
HanXRQChr11g0346921 Helianthus annuus HOM05D003788 ORTHO05D004633 4.0e-11 73.2 210 30.5
TAR627G0146 Trochodendron aralioides HOM05D003788 ORTHO05D004633 4.0e-11 73.2 331 27.8
unitig_0.g982 Utricularia gibba HOM05D003788 ORTHO05D004633 4.0e-11 73.2 263 27.0
Cpa.g.sc12.61 Carica papaya HOM05D003788 ORTHO05D004633 5.2e-11 72.8 210 30.5
Dinv40920 Davidia involucrata HOM05D003788 ORTHO05D004633 5.2e-11 72.8 273 31.1
Duzib170G0482 Durio zibethinus HOM05D003788 ORTHO05D004633 5.2e-11 72.8 251 29.5
A03p13630 Brassica napus HOM05D003788 ORTHO05D004633 6.8e-11 72.4 219 29.7
CSS0001498 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 6.8e-11 72.4 253 31.2
CSS0022631 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 6.8e-11 72.4 263 28.5
CSS0046183 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 6.8e-11 72.4 253 31.2
ECA240G4117 Erigeron canadensis HOM05D003788 ORTHO05D004633 6.8e-11 72.4 217 29.0
PGR031G1033 Punica granatum HOM05D003788 ORTHO05D004633 6.8e-11 72.4 304 28.6
THA.LOC104810306 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 8.9e-11 72.0 242 28.9
vmacro11644 Vaccinium macrocarpon HOM05D003788 ORTHO05D004633 8.9e-11 72.0 322 26.7
HPP92_022807 Vanilla planifolia HOM05D003788 ORTHO05D004633 8.9e-11 72.0 247 30.0
Duzib213G0477 Durio zibethinus HOM05D003788 ORTHO05D004633 1.2e-10 71.6 300 27.7
Oeu015274.1 Olea europaea HOM05D003788 ORTHO05D004633 1.2e-10 71.6 279 29.0
AL8G31880 Arabidopsis lyrata HOM05D003788 ORTHO05D004633 1.5e-10 71.2 249 30.5
ECA236G3073 Erigeron canadensis HOM05D003788 ORTHO05D004633 1.5e-10 71.2 232 30.2
CARHR269640 Cardamine hirsuta HOM05D003788 ORTHO05D004633 2.0e-10 70.9 220 29.1
BolC3t14026H Brassica oleracea HOM05D003788 ORTHO05D004633 2.6e-10 70.5 218 28.9
CDE05G2211 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 2.6e-10 70.5 198 32.3
Thhalv10012702m.g Eutrema salsugineum HOM05D003788 ORTHO05D004633 2.6e-10 70.5 235 26.8
SalBow8G5584 Salvia bowleyana HOM05D003788 ORTHO05D004633 2.6e-10 70.5 265 29.8
BcaC01g06410 Brassica carinata HOM05D003788 ORTHO05D004633 3.4e-10 70.1 221 29.0
BcaC04g20117 Brassica carinata HOM05D003788 ORTHO05D004633 3.4e-10 70.1 262 27.5
BolC9t57603H Brassica oleracea HOM05D003788 ORTHO05D004633 3.4e-10 70.1 262 27.5
Cfa016964 Carpinus fangiana HOM05D003788 ORTHO05D004633 3.4e-10 70.1 344 25.6
COL.COLO4_07793 Corchorus olitorius HOM05D003788 ORTHO05D004633 3.4e-10 70.1 340 26.8
C03p15980 Brassica napus HOM05D003788 ORTHO05D004633 4.4e-10 69.7 221 29.0
Sabra16G0320700 Salix brachista HOM05D003788 ORTHO05D004633 4.4e-10 69.7 273 27.1
TAR629G3040 Trochodendron aralioides HOM05D003788 ORTHO05D004633 4.4e-10 69.7 332 26.5
Sp6g18100 Schrenkiella parvula HOM05D003788 ORTHO05D004633 5.8e-10 69.3 226 29.6
TWI14G1222 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 5.8e-10 69.3 295 28.1
Gohir.A13G128300 Gossypium hirsutum HOM05D003788 ORTHO05D004633 7.5e-10 68.9 295 27.8
HanXRQChr17g0546861 Helianthus annuus HOM05D003788 ORTHO05D004633 7.5e-10 68.9 228 29.8
Lj1A901G37 Lonicera japonica HOM05D003788 ORTHO05D004633 7.5e-10 68.9 264 26.9
PSO782G4685 Papaver somniferum HOM05D003788 ORTHO05D004633 7.5e-10 68.9 332 26.5
C09p47480 Brassica napus HOM05D003788 ORTHO05D004633 9.9e-10 68.6 262 27.1
Gohir.D13G131700 Gossypium hirsutum HOM05D003788 ORTHO05D004633 9.9e-10 68.6 293 28.3
TWI39G0992 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 9.9e-10 68.6 307 26.7
ClCG00G001230 Citrullus lanatus HOM05D003788 ORTHO05D004633 1.3e-09 68.2 327 27.2
ClCG10G003840 Citrullus lanatus HOM05D003788 ORTHO05D004633 1.3e-09 68.2 327 27.2
ClCG10G003960 Citrullus lanatus HOM05D003788 ORTHO05D004633 1.3e-09 68.2 327 27.2
Lsat_1_v5_gn_7_115701 Lactuca sativa HOM05D003788 ORTHO05D004633 1.3e-09 68.2 232 29.3
A10p13490 Brassica napus HOM05D003788 ORTHO05D004633 1.7e-09 67.8 266 27.4
BraA10t43453Z Brassica rapa HOM05D003788 ORTHO05D004633 1.7e-09 67.8 266 27.4
Oeu052883.2 Olea europaea HOM05D003788 ORTHO05D004633 1.7e-09 67.8 290 26.2
CiPaw.11G210900 Carya illinoinensis HOM05D003788 ORTHO05D004633 2.2e-09 67.4 291 26.8
Manes.01G007100 Manihot esculenta HOM05D003788 ORTHO05D004633 2.2e-09 67.4 282 27.7
Prupe.6G035800 Prunus persica HOM05D003788 ORTHO05D004633 2.9e-09 67.0 324 26.5
Rhsim06G0235500 Rhododendron simsii HOM05D003788 ORTHO05D004633 2.9e-09 67.0 268 27.2
EL10Ac4g07522 Beta vulgaris HOM05D003788 ORTHO05D004633 3.7e-09 66.6 294 25.5
BcaB01g04387 Brassica carinata HOM05D003788 ORTHO05D004633 3.7e-09 66.6 230 25.7
unitig_46.g18528 Utricularia gibba HOM05D003788 ORTHO05D004633 3.7e-09 66.6 275 28.0
Zm00001eb424700 Zea mays HOM05D003788 ORTHO05D004633 3.7e-09 66.6 285 27.4
Ah.04g166650 Amaranthus hybridus HOM05D003788 ORTHO05D004633 4.9e-09 66.2 276 27.9
Potri.001G472400 Populus trichocarpa HOM05D003788 ORTHO05D004633 4.9e-09 66.2 277 26.0
TWI38G0822 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 4.9e-09 66.2 282 27.7
Thhalv10012573m.g Eutrema salsugineum HOM05D003788 ORTHO05D004633 8.3e-09 65.5 294 24.5
EL10Ac3g07401 Beta vulgaris HOM05D010496 ORTHO05D010879 1.1e-08 65.1 40 62.5
Migut.H01707 Erythranthe guttata HOM05D003788 ORTHO05D004633 1.1e-08 65.1 285 29.1
Gorai.013G147700 Gossypium raimondii HOM05D003788 ORTHO05D004633 1.1e-08 65.1 296 27.4
FAN25G3203 Fragaria x ananassa HOM05D003788 ORTHO05D004633 1.4e-08 64.7 320 27.2
Lalb_Chr06g0164061 Lupinus albus HOM05D011141 ORTHO05D010879 1.4e-08 64.7 195 31.8
CARHR269650 Cardamine hirsuta HOM05D003788 ORTHO05D004633 1.9e-08 64.3 261 28.7
PGSC0003DMG400022144 Solanum tuberosum HOM05D003788 ORTHO05D004633 1.9e-08 64.3 322 27.6
Aa31LG3G12140 Aethionema arabicum HOM05D003788 ORTHO05D004633 2.4e-08 63.9 299 24.4
CANSAT11G0655 Cannabis sativa HOM05D003788 ORTHO05D004633 2.4e-08 63.9 74 43.2
A02p09250 Brassica napus HOM05D003788 ORTHO05D004633 3.2e-08 63.5 219 28.8
Eucgr.F01984 Eucalyptus grandis HOM05D003788 ORTHO05D004633 3.2e-08 63.5 298 27.2
Hund23029 Selenicereus undatus HOM05D003788 ORTHO05D004633 3.2e-08 63.5 73 42.5
Sopen07g034380 Solanum pennellii HOM05D003788 ORTHO05D004633 3.2e-08 63.5 322 26.1
AT5G56250 Arabidopsis thaliana HOM05D003788 ORTHO05D004633 4.1e-08 63.2 222 28.4
Haze_09919 Corylus avellana HOM05D003788 ORTHO05D004633 4.1e-08 63.2 308 26.0
CsaV3_3G003820 Cucumis sativus L. HOM05D003788 ORTHO05D004633 4.1e-08 63.2 279 26.9
Nitab4.5_0001732g0050 Nicotiana tabacum HOM05D003788 ORTHO05D004633 4.1e-08 63.2 260 27.3
SEGI_04749 Sequoiadendron giganteum HOM05D003788 ORTHO05D004633 5.4e-08 62.8 61 47.5
AUR62035659 Chenopodium quinoa HOM05D003788 ORTHO05D004633 9.2e-08 62.0 80 40.0
AUR62017148 Chenopodium quinoa HOM05D003788 ORTHO05D004633 1.2e-07 61.6 54 48.1
Potri.011G169100 Populus trichocarpa HOM05D003788 ORTHO05D004633 1.2e-07 61.6 283 26.1
Atru.chr2.3902 Acer truncatum HOM05D003788 ORTHO05D004633 1.6e-07 61.2 51 52.9
BolC3t14027H Brassica oleracea HOM05D003788 ORTHO05D004633 1.6e-07 61.2 290 25.5
Lsat_1_v5_gn_9_88661 Lactuca sativa HOM05D003788 ORTHO05D004633 1.6e-07 61.2 208 29.3
AL191U10030 Arabidopsis lyrata HOM05D003788 ORTHO05D004633 2.1e-07 60.8 280 25.0
AL8G31870 Arabidopsis lyrata HOM05D003788 ORTHO05D004633 2.1e-07 60.8 280 25.0
AT5G56240 Arabidopsis thaliana HOM05D003788 ORTHO05D004633 2.1e-07 60.8 302 25.2
Sc03g0011790 Simmondsia chinensis HOM05D003788 ORTHO05D004633 2.1e-07 60.8 300 26.7
Solyc07g066200.4 Solanum lycopersicum HOM05D003788 ORTHO05D004633 2.1e-07 60.8 325 26.5
VMungo0720G1878 Vigna mungo HOM05D011141 ORTHO05D010879 2.1e-07 60.8 201 28.4
C09p47500 Brassica napus HOM05D003788 ORTHO05D004633 2.7e-07 60.5 241 27.4
FvH4_3g41530 Fragaria vesca HOM05D003788 ORTHO05D004633 2.7e-07 60.5 65 46.2
FAN11G0056 Fragaria x ananassa HOM05D003788 ORTHO05D004633 2.7e-07 60.5 65 46.2
FAN16G1134 Fragaria x ananassa HOM05D003788 ORTHO05D004633 2.7e-07 60.5 65 46.2
FAN21G2445 Fragaria x ananassa HOM05D003788 ORTHO05D004633 2.7e-07 60.5 77 41.6
MELO3C014063.2 Cucumis melo HOM05D003788 ORTHO05D004633 3.5e-07 60.1 276 27.2
BcaB01g04386 Brassica carinata HOM05D003788 ORTHO05D004633 4.6e-07 59.7 300 24.7
Os04g0471400 Oryza sativa ssp. japonica HOM05D003788 ORTHO05D004633 4.6e-07 59.7 272 25.4
Phvul.007G006900 Phaseolus vulgaris HOM05D011141 ORTHO05D010879 4.6e-07 59.7 199 27.6
Sabra11G0137700 Salix brachista HOM05D003788 ORTHO05D004633 4.6e-07 59.7 283 25.8
Actinidia31533 Actinidia chinensis HOM05D003788 ORTHO05D004633 7.8e-07 58.9 311 23.8
BcaC01g06409 Brassica carinata HOM05D003788 ORTHO05D004633 7.8e-07 58.9 290 25.2
BcaC03g14236 Brassica carinata HOM05D003788 ORTHO05D004633 7.8e-07 58.9 309 24.6
CDE03G0063 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 7.8e-07 58.9 47 53.2
MD11G1046500 Malus domestica HOM05D003788 ORTHO05D004633 7.8e-07 58.9 99 31.3
C02p15420 Brassica napus HOM05D003788 ORTHO05D004633 1.0e-06 58.5 309 24.6
BolC2t07656H Brassica oleracea HOM05D003788 ORTHO05D004633 1.0e-06 58.5 309 24.6
Nitab4.5_0000152g0020 Nicotiana tabacum HOM05D003788 ORTHO05D004633 1.0e-06 58.5 263 25.5
Sed0023936 Sechium edule HOM05D003788 ORTHO05D004633 1.0e-06 58.5 142 32.4
Zm00001eb079970 Zea mays HOM05D003788 ORTHO05D004633 1.3e-06 58.2 317 25.6
C03p15990 Brassica napus HOM05D003788 ORTHO05D004633 2.3e-06 57.4 287 25.8
Carub.0008s1656 Capsella rubella HOM05D003788 ORTHO05D004633 2.3e-06 57.4 274 25.2
DCAR_013754 Daucus carota HOM05D003788 ORTHO05D004633 3.0e-06 57.0 101 33.7
Sed0020897 Sechium edule HOM05D003788 ORTHO05D004633 3.9e-06 56.6 216 25.5
MD03G1043400 Malus domestica HOM05D003788 ORTHO05D004633 5.1e-06 56.2 41 53.7


User provided reference genes

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