Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0989 Trochodendron aralioides HOM05D000137 ORTHO05D048475 3.9e-69 264.6 127 100.0
TAR365G1238 Trochodendron aralioides HOM05D000137 ORTHO05D000503 1.2e-49 199.9 94 100.0
TAR365G1262 Trochodendron aralioides HOM05D000137 ORTHO05D000503 1.2e-49 199.9 94 100.0
Nn1g02138 Nelumbo nucifera HOM05D000137 ORTHO05D000503 2.0e-33 146.0 96 76.0
GSVIVG01017873001 Vitis vinifera HOM05D000137 ORTHO05D000503 2.0e-33 146.0 97 73.2
Duzib151G0642 Durio zibethinus HOM05D000137 ORTHO05D000503 1.3e-32 143.3 96 71.9
Thecc.04G219700 Theobroma cacao HOM05D000137 ORTHO05D000503 2.2e-32 142.5 96 71.9
Manes.15G021900 Manihot esculenta HOM05D000137 ORTHO05D000503 8.4e-32 140.6 96 68.8
Hund12210 Selenicereus undatus HOM05D000137 ORTHO05D000503 1.9e-31 139.4 96 68.8
arahy.Tifrunner.gnm1.ann1.9G5FU0 Arachis hypogaea HOM05D000137 ORTHO05D000503 5.5e-31 137.9 97 70.1
arahy.Tifrunner.gnm1.ann1.VK23H5 Arachis hypogaea HOM05D000137 ORTHO05D000503 5.5e-31 137.9 97 70.1
MBI17_g47758_MAGBIO Magnolia biondii HOM05D000137 ORTHO05D000503 5.5e-31 137.9 96 67.7
Sed0021666 Sechium edule HOM05D000137 ORTHO05D000503 9.3e-31 137.1 99 64.6
MELO3C021394.2 Cucumis melo HOM05D000137 ORTHO05D000503 1.2e-30 136.7 104 61.5
COL.COLO4_21628 Corchorus olitorius HOM05D000137 ORTHO05D000503 2.7e-30 135.6 96 69.8
Manes.03G186100 Manihot esculenta HOM05D000137 ORTHO05D000503 4.6e-30 134.8 96 69.8
CsaV3_6G005430 Cucumis sativus L. HOM05D000137 ORTHO05D000503 6.0e-30 134.4 99 63.6
CSS0027011 Camellia sinensis var. sinensis HOM05D000137 ORTHO05D000503 7.9e-30 134.0 101 66.3
CSS0035254 Camellia sinensis var. sinensis HOM05D000137 ORTHO05D000503 7.9e-30 134.0 101 66.3
Actinidia00082 Actinidia chinensis HOM05D000137 ORTHO05D000503 1.0e-29 133.7 101 66.3
Dinv38370 Davidia involucrata HOM05D000137 ORTHO05D000503 1.3e-29 133.3 101 66.3
Potri.008G200800 Populus trichocarpa HOM05D000137 ORTHO05D000503 1.8e-29 132.9 95 66.3
vmacro15299 Vaccinium macrocarpon HOM05D000137 ORTHO05D000503 2.3e-29 132.5 98 67.3
Lalb_Chr13g0304051 Lupinus albus HOM05D000137 ORTHO05D000503 5.1e-29 131.3 96 69.8
Rhsim02G0019000 Rhododendron simsii HOM05D000137 ORTHO05D000503 8.7e-29 130.6 122 58.2
Cfa015564 Carpinus fangiana HOM05D000137 ORTHO05D000503 1.5e-28 129.8 95 69.5
Lj6g0015212 Lotus japonicus HOM05D000137 ORTHO05D000503 1.5e-28 129.8 96 66.7
Medtr2g021330 Medicago truncatula HOM05D000137 ORTHO05D000503 1.5e-28 129.8 96 67.7
Potri.010G029700 Populus trichocarpa HOM05D000137 ORTHO05D000503 1.5e-28 129.8 95 64.2
TPR.G28921 Trifolium pratense HOM05D000137 ORTHO05D000503 1.5e-28 129.8 95 68.4
ClCG06G005720 Citrullus lanatus HOM05D000137 ORTHO05D000503 2.5e-28 129.0 99 61.6
Phvul.006G155300 Phaseolus vulgaris HOM05D000137 ORTHO05D000503 2.5e-28 129.0 97 67.0
Sabra08G0160400 Salix brachista HOM05D000137 ORTHO05D000503 2.5e-28 129.0 95 66.3
Lj6g0018560 Lotus japonicus HOM05D000137 ORTHO05D048475 3.3e-28 128.6 96 66.7
MD13G1181100 Malus domestica HOM05D000137 ORTHO05D000503 7.4e-28 127.5 98 68.4
Lalb_Chr12g0196261 Lupinus albus HOM05D000137 ORTHO05D000503 9.6e-28 127.1 98 67.3
Psat1g184720 Pisum sativum HOM05D000137 ORTHO05D000503 9.6e-28 127.1 95 69.5
Glyma.13G210300 Glycine max HOM05D000137 ORTHO05D000503 1.3e-27 126.7 97 67.0
arahy.Tifrunner.gnm1.ann1.521JDX Arachis hypogaea HOM05D000137 ORTHO05D000503 2.1e-27 125.9 94 66.0
arahy.Tifrunner.gnm1.ann1.E5L63Q Arachis hypogaea HOM05D000137 ORTHO05D000503 2.1e-27 125.9 94 66.0
QL06p005838 Quercus lobata HOM05D000137 ORTHO05D000503 2.8e-27 125.6 97 67.0
Cpa.g.sc16.44 Carica papaya HOM05D000137 ORTHO05D000503 3.7e-27 125.2 96 64.6
Aqoxy2G03232 Aquilegia oxysepala HOM05D000137 ORTHO05D000503 6.2e-27 124.4 95 64.2
Ciclev10004660m.g Citrus clementina HOM05D000137 ORTHO05D000503 6.2e-27 124.4 96 66.7
MD16G1181800 Malus domestica HOM05D000137 ORTHO05D000503 6.2e-27 124.4 98 66.3
Solyc01g080240.4 Solanum lycopersicum HOM05D000137 ORTHO05D000503 8.2e-27 124.0 99 67.7
Sopen01g032020 Solanum pennellii HOM05D000137 ORTHO05D000503 8.2e-27 124.0 99 67.7
Ca_00613_v3 Cicer arietinum L. HOM05D000137 ORTHO05D000503 1.1e-26 123.6 97 64.9
Prupe.1G149300 Prunus persica HOM05D000137 ORTHO05D000503 1.1e-26 123.6 97 66.0
Lalb_Chr07g0177411 Lupinus albus HOM05D000137 ORTHO05D000503 1.4e-26 123.2 97 67.0
Nitab4.5_0002592g0010 Nicotiana tabacum HOM05D000137 ORTHO05D000503 1.4e-26 123.2 99 64.6
Oeu042775.1 Olea europaea HOM05D000137 ORTHO05D000503 1.4e-26 123.2 97 63.9
FAN07G2554 Fragaria x ananassa HOM05D000137 ORTHO05D000503 2.4e-26 122.5 98 68.4
VMungo1215G0501 Vigna mungo HOM05D000137 ORTHO05D000503 2.4e-26 122.5 94 64.9
RcHm_v2.0_Chr4g0418931 Rosa chinensis HOM05D000137 ORTHO05D000503 3.1e-26 122.1 98 69.4
Duzib212G0741 Durio zibethinus HOM05D000137 ORTHO05D000503 4.0e-26 121.7 97 66.0
TPR.G20127 Trifolium pratense HOM05D000137 ORTHO05D000503 4.0e-26 121.7 90 66.7
FAN17G1874 Fragaria x ananassa HOM05D000137 ORTHO05D000503 5.3e-26 121.3 98 68.4
PGSC0003DMG400004357 Solanum tuberosum HOM05D000137 ORTHO05D000503 6.9e-26 120.9 99 66.7
VMungo0540G1614 Vigna mungo HOM05D000137 ORTHO05D000503 6.9e-26 120.9 93 66.7
CAN.G522.2 Capsicum annuum HOM05D000137 ORTHO05D000503 9.0e-26 120.6 99 64.6
AUR62002635 Chenopodium quinoa HOM05D000137 ORTHO05D000503 9.0e-26 120.6 97 60.8
Nn4g26162 Nelumbo nucifera HOM05D000137 ORTHO05D000503 9.0e-26 120.6 94 64.9
CiPaw.02G090700 Carya illinoinensis HOM05D000137 ORTHO05D000503 1.2e-25 120.2 92 66.3
FvH4_4g14280 Fragaria vesca HOM05D000137 ORTHO05D000503 1.2e-25 120.2 98 67.3
Lj4g0023416 Lotus japonicus HOM05D000137 ORTHO05D000503 1.5e-25 119.8 98 67.3
Peaxi162Scf00095g00913 Petunia axillaris HOM05D000137 ORTHO05D000503 1.5e-25 119.8 99 63.6
FAN22G0878 Fragaria x ananassa HOM05D000137 ORTHO05D000503 2.0e-25 119.4 98 67.3
CANSAT78G0090 Cannabis sativa HOM05D000137 ORTHO05D000503 2.6e-25 119.0 99 67.7
Psat4g030680 Pisum sativum HOM05D000137 ORTHO05D000503 2.6e-25 119.0 90 64.4
TWI53G2101 Tripterygium wilfordii HOM05D000137 ORTHO05D000503 2.6e-25 119.0 96 62.5
Medtr4g117490 Medicago truncatula HOM05D000137 ORTHO05D000503 4.5e-25 118.2 90 64.4
Phvul.003G095900 Phaseolus vulgaris HOM05D000137 ORTHO05D000503 4.5e-25 118.2 94 62.8
Eucgr.B01157 Eucalyptus grandis HOM05D000137 ORTHO05D000503 5.8e-25 117.9 98 57.1
Nitab4.5_0000732g0180 Nicotiana tabacum HOM05D000137 ORTHO05D000503 7.6e-25 117.5 99 61.6
Oeu029296.2 Olea europaea HOM05D000137 ORTHO05D000503 7.6e-25 117.5 97 60.8
AUR62030051 Chenopodium quinoa HOM05D000137 ORTHO05D000503 1.0e-24 117.1 97 59.8
Gohir.A02G024900 Gossypium hirsutum HOM05D000137 ORTHO05D000503 1.0e-24 117.1 96 62.5
Gohir.D02G032100 Gossypium hirsutum HOM05D000137 ORTHO05D000503 1.0e-24 117.1 96 62.5
Gorai.005G035600 Gossypium raimondii HOM05D000137 ORTHO05D000503 1.0e-24 117.1 96 62.5
Atru.chr4.2591 Acer truncatum HOM05D000137 ORTHO05D000503 1.3e-24 116.7 97 63.9
Ca_21579_v3 Cicer arietinum L. HOM05D000137 ORTHO05D000503 2.2e-24 115.9 92 64.1
MSTRG.3983 Avicennia marina HOM05D000137 ORTHO05D000503 2.9e-24 115.5 104 58.7
CiPaw.01G158500 Carya illinoinensis HOM05D000137 ORTHO05D000503 3.8e-24 115.2 97 63.9
SalBow2G1082 Salvia bowleyana HOM05D000137 ORTHO05D000503 3.8e-24 115.2 97 60.8
Haze_00978 Corylus avellana HOM05D000137 ORTHO05D000503 4.9e-24 114.8 95 64.2
HPP92_016094 Vanilla planifolia HOM05D000137 ORTHO05D000503 4.2e-23 111.7 118 48.3
Glyma.07G255400 Glycine max HOM05D000137 ORTHO05D000503 9.3e-23 110.5 97 61.9
DCAR_030590 Daucus carota HOM05D000137 ORTHO05D000503 1.2e-22 110.2 99 60.6
PGR031G3611 Punica granatum HOM05D000137 ORTHO05D000503 1.6e-22 109.8 100 62.0
TWI73G1247 Tripterygium wilfordii HOM05D000137 ORTHO05D000503 2.7e-22 109.0 93 57.0
Sc13g0003860 Simmondsia chinensis HOM05D000137 ORTHO05D000503 6.0e-22 107.8 100 57.0
Cc03_g02990 Coffea canephora HOM05D000137 ORTHO05D000503 1.8e-21 106.3 98 59.2
EL10Ac3g06324 Beta vulgaris HOM05D000137 ORTHO05D000503 2.3e-21 105.9 97 59.8
Lj6A663T87 Lonicera japonica HOM05D000137 ORTHO05D000503 2.3e-21 105.9 98 60.2
TWI09G1239 Tripterygium wilfordii HOM05D000137 ORTHO05D000503 8.7e-21 104.0 97 55.7
CSS0017766 Camellia sinensis var. sinensis HOM05D000137 ORTHO05D000503 1.1e-20 103.6 94 62.8
Rhsim04G0209600 Rhododendron simsii HOM05D000137 ORTHO05D000503 5.7e-20 101.3 98 59.2
THA.LOC104802740 Tarenaya hassleriana HOM05D000137 ORTHO05D000503 2.8e-19 99.0 100 58.0
ATR0626G133 Amborella trichopoda HOM05D000137 ORTHO05D000503 1.4e-18 96.7 94 56.4
MSTRG.24759 Avicennia marina HOM05D000137 ORTHO05D000503 5.3e-18 94.7 97 52.6
vmacro08251 Vaccinium macrocarpon HOM05D000137 ORTHO05D000503 5.3e-18 94.7 98 58.2
SGA_v2.0_scaffold107G30785 Striga asiatica HOM05D000137 ORTHO05D000503 2.2e-16 89.4 95 50.5
SGA_v2.0_scaffold166G38386 Striga asiatica HOM05D000137 ORTHO05D000503 5.0e-16 88.2 95 49.5
Zm00001eb108620 Zea mays HOM05D000137 ORTHO05D000503 5.0e-16 88.2 94 47.9
HanXRQChr03g0071491 Helianthus annuus HOM05D000137 ORTHO05D000503 8.5e-16 87.4 103 48.5
Aa31LG11G10720 Aethionema arabicum HOM05D000137 ORTHO05D000503 3.2e-15 85.5 99 48.5
SEGI_28216 Sequoiadendron giganteum HOM05D000137 ORTHO05D000503 4.2e-15 85.1 93 48.4
Migut.N00143 Erythranthe guttata HOM05D000137 ORTHO05D000503 1.2e-14 83.6 103 49.5
PSO170G5369 Papaver somniferum HOM05D000137 ORTHO05D000503 3.6e-14 82.0 61 68.9
HanXRQChr09g0248301 Helianthus annuus HOM05D000137 ORTHO05D000503 6.1e-14 81.3 106 45.3
SalBow5G1531 Salvia bowleyana HOM05D000137 ORTHO05D000503 1.4e-13 80.1 99 48.5
SalBow5G4696 Salvia bowleyana HOM05D000137 ORTHO05D000503 1.4e-13 80.1 99 48.5
Zm00001eb417810 Zea mays HOM05D000137 ORTHO05D000503 1.8e-13 79.7 95 45.3
AL6G30360 Arabidopsis lyrata HOM05D000137 ORTHO05D000503 3.0e-13 79.0 106 42.5
ECA240G2969 Erigeron canadensis HOM05D000137 ORTHO05D000503 6.7e-13 77.8 112 45.5
Lsat_1_v5_gn_7_62441 Lactuca sativa HOM05D000137 ORTHO05D000503 1.1e-12 77.0 107 43.9
Thhalv10013120m.g Eutrema salsugineum HOM05D000137 ORTHO05D000503 1.5e-12 76.6 106 43.4
CARHR193990 Cardamine hirsuta HOM05D000137 ORTHO05D000503 1.9e-12 76.3 98 46.9
unitig_748.g8353 Utricularia gibba HOM05D000137 ORTHO05D000503 1.9e-12 76.3 111 39.6
AT5G19010 Arabidopsis thaliana HOM05D000137 ORTHO05D000503 4.3e-12 75.1 107 42.1
BcaB01g05287 Brassica carinata HOM05D000137 ORTHO05D000503 5.7e-12 74.7 105 45.7
BcaB08g36628 Brassica carinata HOM05D000137 ORTHO05D000503 1.3e-11 73.6 107 43.9
A03p09260 Brassica napus HOM05D000137 ORTHO05D000503 1.3e-11 73.6 106 45.3
BraA03t10245Z Brassica rapa HOM05D000137 ORTHO05D000503 1.3e-11 73.6 106 45.3
Sp6g25380 Schrenkiella parvula HOM05D000137 ORTHO05D000503 1.3e-11 73.6 100 46.0
C03p10790 Brassica napus HOM05D000137 ORTHO05D000503 1.7e-11 73.2 106 45.3
BolC3t13552H Brassica oleracea HOM05D000137 ORTHO05D000503 2.2e-11 72.8 106 44.3
CDE02G0436 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 2.8e-11 72.4 71 50.7
CDE09G0128 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 4.8e-11 71.6 70 51.4
A10p20680 Brassica napus HOM05D000137 ORTHO05D000503 1.8e-10 69.7 107 43.9
BraA10t44131Z Brassica rapa HOM05D000137 ORTHO05D000503 1.8e-10 69.7 107 43.9
C09p57470 Brassica napus HOM05D000137 ORTHO05D000503 2.4e-10 69.3 106 44.3
BolC9t58615H Brassica oleracea HOM05D000137 ORTHO05D000503 2.4e-10 69.3 106 44.3
Carub.0006s1732 Capsella rubella HOM05D000137 ORTHO05D000503 2.4e-10 69.3 105 41.0
BcaC04g18628 Brassica carinata HOM05D000137 ORTHO05D000503 4.1e-10 68.6 106 41.5
Lalb_Chr15g0087321 Lupinus albus HOM05D000137 ORTHO05D000503 2.0e-09 66.2 61 62.3
Actinidia08520 Actinidia chinensis HOM05D000137 ORTHO05D000503 3.8e-08 62.0 58 56.9
SEGI_07147 Sequoiadendron giganteum HOM05D000137 ORTHO05D000503 3.8e-08 62.0 95 41.1
FAN10G3226 Fragaria x ananassa HOM05D000137 ORTHO05D202860 4.7e-06 55.1 44 63.6


User provided reference genes

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