Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0886 Trochodendron aralioides HOM05D002342 ORTHO05D002407 9.9e-58 226.5 108 100.0
TAR365G0582 Trochodendron aralioides HOM05D002342 ORTHO05D002407 7.9e-31 137.1 72 94.4
TAR365G0670 Trochodendron aralioides HOM05D002342 ORTHO05D002407 1.7e-28 129.4 72 90.3
TAR365G0690 Trochodendron aralioides HOM05D002342 ORTHO05D002407 1.7e-28 129.4 72 90.3
Aqoxy2G03980 Aquilegia oxysepala HOM05D002342 ORTHO05D002407 1.1e-24 116.7 71 77.5
MBI04_g21151_MAGBIO Magnolia biondii HOM05D002342 ORTHO05D002407 5.5e-24 114.4 71 77.5
Nn1g07933 Nelumbo nucifera HOM05D002342 ORTHO05D002407 4.7e-23 111.3 70 75.7
GSVIVG01020920001 Vitis vinifera HOM05D002342 ORTHO05D002407 1.8e-22 109.4 71 73.2
CiPaw.01G119300 Carya illinoinensis HOM05D002342 ORTHO05D002407 2.0e-21 105.9 70 75.7
Dinv27217 Davidia involucrata HOM05D002342 ORTHO05D002407 7.4e-21 104.0 71 71.8
Haze_11627 Corylus avellana HOM05D002342 ORTHO05D002407 1.3e-20 103.2 71 70.4
Lj6C522G10 Lonicera japonica HOM05D002342 ORTHO05D002407 1.3e-20 103.2 71 69.0
MD04G1012800 Malus domestica HOM05D002342 ORTHO05D002407 2.2e-20 102.4 71 67.6
Lj6C526T11 Lonicera japonica HOM05D002342 ORTHO05D002407 2.8e-20 102.1 71 69.0
Prupe.1G159000 Prunus persica HOM05D002342 ORTHO05D002407 2.8e-20 102.1 71 66.2
Oeu055768.2 Olea europaea HOM05D002342 ORTHO05D002407 3.7e-20 101.7 70 68.6
Hund05344 Selenicereus undatus HOM05D002342 ORTHO05D002407 3.7e-20 101.7 71 66.2
Eucgr.A01634 Eucalyptus grandis HOM05D002342 ORTHO05D002407 6.3e-20 100.9 71 66.2
QL05p014243 Quercus lobata HOM05D002342 ORTHO05D002407 6.3e-20 100.9 70 72.9
RcHm_v2.0_Chr4g0414351 Rosa chinensis HOM05D002342 ORTHO05D002407 6.3e-20 100.9 72 65.3
Dinv38212 Davidia involucrata HOM05D002342 ORTHO05D002407 8.2e-20 100.5 71 67.6
Migut.N00402 Erythranthe guttata HOM05D002342 ORTHO05D002407 8.2e-20 100.5 71 67.6
Migut.G00912 Erythranthe guttata HOM05D002342 ORTHO05D002407 1.1e-19 100.1 71 66.2
HanXRQChr11g0339061 Helianthus annuus HOM05D002342 ORTHO05D002407 1.1e-19 100.1 71 69.0
Manes.03G146000 Manihot esculenta HOM05D002342 ORTHO05D002407 1.4e-19 99.8 70 71.4
Lj6C517T2 Lonicera japonica HOM05D002342 ORTHO05D002407 1.8e-19 99.4 71 64.8
Lj6C525G9 Lonicera japonica HOM05D002342 ORTHO05D002407 1.8e-19 99.4 71 64.8
QL05p014435 Quercus lobata HOM05D002342 ORTHO05D002407 1.8e-19 99.4 70 71.4
FvH4_4g13660 Fragaria vesca HOM05D002342 ORTHO05D002407 2.4e-19 99.0 72 63.9
FAN12G2750 Fragaria x ananassa HOM05D002342 ORTHO05D002407 2.4e-19 99.0 72 63.9
FAN22G0412 Fragaria x ananassa HOM05D002342 ORTHO05D002407 2.4e-19 99.0 72 63.9
HanXRQChr16g0515531 Helianthus annuus HOM05D000002 ORTHO05D000001 2.4e-19 99.0 71 69.0
Sed0007147 Sechium edule HOM05D002342 ORTHO05D002407 2.4e-19 99.0 72 66.7
ClCG05G003260 Citrullus lanatus HOM05D002342 ORTHO05D002407 3.1e-19 98.6 71 67.6
Eucgr.H02741 Eucalyptus grandis HOM05D002342 ORTHO05D002407 4.1e-19 98.2 71 66.2
Atru.chr4.1618 Acer truncatum HOM05D002342 ORTHO05D002407 5.3e-19 97.8 71 64.8
Lsat_1_v5_gn_6_60880 Lactuca sativa HOM05D002342 ORTHO05D002407 5.3e-19 97.8 72 70.8
Lj6C523G2 Lonicera japonica HOM05D002342 ORTHO05D002407 5.3e-19 97.8 71 63.4
QL05p014183 Quercus lobata HOM05D002342 ORTHO05D002407 5.3e-19 97.8 71 70.4
Hma1.2p1_0383F.1_g140560 Hydrangea macrophylla HOM05D002342 ORTHO05D002407 9.1e-19 97.1 71 67.6
QL05p014631 Quercus lobata HOM05D002342 ORTHO05D002407 9.1e-19 97.1 70 70.0
Cfa014941 Carpinus fangiana HOM05D002342 ORTHO05D002407 1.2e-18 96.7 70 70.0
Haze_11629 Corylus avellana HOM05D002342 ORTHO05D002407 1.2e-18 96.7 70 70.0
Sc13g0000230 Simmondsia chinensis HOM05D002342 ORTHO05D002407 1.2e-18 96.7 71 64.8
FAN07G2373 Fragaria x ananassa HOM05D002342 ORTHO05D002407 1.5e-18 96.3 72 62.5
PSO063G4028 Papaver somniferum HOM05D002342 ORTHO05D002407 3.4e-18 95.1 71 66.2
Gohir.D02G113900 Gossypium hirsutum HOM05D002342 ORTHO05D002407 4.5e-18 94.7 71 63.4
Gorai.005G129600 Gossypium raimondii HOM05D002342 ORTHO05D002407 4.5e-18 94.7 71 63.4
HanXRQChr16g0498001 Helianthus annuus HOM05D002342 ORTHO05D002407 4.5e-18 94.7 71 63.4
Nitab4.5_0000401g0100 Nicotiana tabacum HOM05D002342 ORTHO05D002407 4.5e-18 94.7 69 66.7
PSO017G5596 Papaver somniferum HOM05D002342 ORTHO05D002407 4.5e-18 94.7 71 64.8
Atru.chr4.1622 Acer truncatum HOM05D002342 ORTHO05D002407 5.9e-18 94.4 71 63.4
Gohir.A03G095600 Gossypium hirsutum HOM05D002342 ORTHO05D002407 5.9e-18 94.4 71 63.4
MD04G1013100 Malus domestica HOM05D002342 ORTHO05D002407 5.9e-18 94.4 70 67.1
CSS0000956 Camellia sinensis var. sinensis HOM05D002342 ORTHO05D002407 7.7e-18 94.0 71 64.8
Hma1.2p1_0383F.1_g140620 Hydrangea macrophylla HOM05D002342 ORTHO05D002407 7.7e-18 94.0 71 67.6
MD04G1012900 Malus domestica HOM05D002342 ORTHO05D002407 7.7e-18 94.0 70 68.6
CiPaw.01G119000 Carya illinoinensis HOM05D002342 ORTHO05D002407 1.0e-17 93.6 70 68.6
Hma1.2p1_0383F.1_g140370 Hydrangea macrophylla HOM05D002342 ORTHO05D002407 1.0e-17 93.6 71 66.2
HanXRQChr02g0059031 Helianthus annuus HOM05D002342 ORTHO05D002407 1.3e-17 93.2 71 63.4
Nitab4.5_0006215g0010 Nicotiana tabacum HOM05D002342 ORTHO05D002407 1.3e-17 93.2 69 65.2
PSO017G1666 Papaver somniferum HOM05D002342 ORTHO05D002407 1.3e-17 93.2 71 64.8
PSO063G7363 Papaver somniferum HOM05D002342 ORTHO05D002407 1.3e-17 93.2 71 64.8
Migut.N01843 Erythranthe guttata HOM05D002342 ORTHO05D002407 1.7e-17 92.8 72 59.7
Lj6A517T28 Lonicera japonica HOM05D002342 ORTHO05D002407 1.7e-17 92.8 70 61.4
Lj6C525G6 Lonicera japonica HOM05D002342 ORTHO05D002407 1.7e-17 92.8 70 61.4
Prupe.1G159200 Prunus persica HOM05D002342 ORTHO05D002407 1.7e-17 92.8 70 64.3
PGR083G1386 Punica granatum HOM05D002342 ORTHO05D002407 2.9e-17 92.0 71 60.6
EL10Ac3g07477 Beta vulgaris HOM05D002342 ORTHO05D002407 3.8e-17 91.7 70 61.4
ECA233G4700 Erigeron canadensis HOM05D002342 ORTHO05D002407 3.8e-17 91.7 71 59.2
Rhsim09G0058500 Rhododendron simsii HOM05D002342 ORTHO05D002407 3.8e-17 91.7 73 63.0
Sed0020750 Sechium edule HOM05D002342 ORTHO05D002407 3.8e-17 91.7 72 59.7
unitig_8.g4999 Utricularia gibba HOM05D002342 ORTHO05D002407 3.8e-17 91.7 70 62.9
Oeu045313.1 Olea europaea HOM05D002342 ORTHO05D002407 5.0e-17 91.3 71 64.8
Sabra16G0200600 Salix brachista HOM05D002342 ORTHO05D002407 5.0e-17 91.3 70 67.1
SGA_v2.0_scaffold31G12585 Striga asiatica HOM05D002342 ORTHO05D002407 6.5e-17 90.9 75 64.0
HPP92_028111 Vanilla planifolia HOM05D002342 ORTHO05D002407 6.5e-17 90.9 72 61.1
ECA233G6204 Erigeron canadensis HOM05D002342 ORTHO05D002407 1.1e-16 90.1 72 58.3
Peaxi162Scf00047g00342 Petunia axillaris HOM05D002342 ORTHO05D002407 1.1e-16 90.1 69 65.2
RcHm_v2.0_Chr6g0275261 Rosa chinensis HOM05D002342 ORTHO05D002407 2.5e-16 89.0 68 63.2
CAN.G1333.8 Capsicum annuum HOM05D002342 ORTHO05D002407 3.2e-16 88.6 69 60.9
AUR62020836 Chenopodium quinoa HOM05D002342 ORTHO05D002407 3.2e-16 88.6 70 58.6
Medtr8g085280 Medicago truncatula HOM05D002342 ORTHO05D002407 3.2e-16 88.6 70 60.0
Thecc.04G199700 Theobroma cacao HOM05D002342 ORTHO05D002407 3.2e-16 88.6 71 62.0
Lalb_Chr12g0205541 Lupinus albus HOM05D002342 ORTHO05D002407 4.2e-16 88.2 70 60.0
Potri.001G317200 Populus trichocarpa HOM05D002342 ORTHO05D002407 4.2e-16 88.2 70 64.3
HPP92_020875 Vanilla planifolia HOM05D002342 ORTHO05D002407 4.2e-16 88.2 70 61.4
Ah.14g086370 Amaranthus hybridus HOM05D002342 ORTHO05D002407 7.2e-16 87.4 70 57.1
ECA233G4033 Erigeron canadensis HOM05D002342 ORTHO05D002407 7.2e-16 87.4 71 60.6
Lsat_1_v5_gn_6_60921 Lactuca sativa HOM05D002342 ORTHO05D002407 7.2e-16 87.4 72 56.9
Solyc09g092100.4 Solanum lycopersicum HOM05D002342 ORTHO05D002407 7.2e-16 87.4 69 60.9
Sopen09g034970 Solanum pennellii HOM05D002342 ORTHO05D002407 7.2e-16 87.4 69 60.9
AUR62018579 Chenopodium quinoa HOM05D002342 ORTHO05D002407 9.4e-16 87.0 70 58.6
AUR62018583 Chenopodium quinoa HOM05D002342 ORTHO05D002407 9.4e-16 87.0 70 58.6
Glyma.08G111400 Glycine max HOM05D002342 ORTHO05D002407 9.4e-16 87.0 70 60.0
Lj6A516T55 Lonicera japonica HOM05D002342 ORTHO05D002407 9.4e-16 87.0 71 62.0
THA.LOC104804807 Tarenaya hassleriana HOM05D002342 ORTHO05D002407 9.4e-16 87.0 71 64.8
arahy.Tifrunner.gnm1.ann1.ZGTC82 Arachis hypogaea HOM05D002342 ORTHO05D002407 1.2e-15 86.7 70 61.4
Cc03_g08030 Coffea canephora HOM05D002342 ORTHO05D002407 1.2e-15 86.7 73 61.6
Atru.chr4.1627 Acer truncatum HOM05D002342 ORTHO05D002407 1.6e-15 86.3 71 60.6
PGSC0003DMG402026419 Solanum tuberosum HOM05D002342 ORTHO05D002407 1.6e-15 86.3 69 62.3
TWI09G0668 Tripterygium wilfordii HOM05D002342 ORTHO05D002407 1.6e-15 86.3 70 61.4
MELO3C006307.2 Cucumis melo HOM05D002342 ORTHO05D002407 2.7e-15 85.5 71 59.2
CsaV3_3G010890 Cucumis sativus L. HOM05D002342 ORTHO05D002407 2.7e-15 85.5 71 57.7
Migut.N01844 Erythranthe guttata HOM05D002342 ORTHO05D002407 2.7e-15 85.5 71 63.4
Lj4g0001754 Lotus japonicus HOM05D002342 ORTHO05D002407 2.7e-15 85.5 70 57.1
Cpa.g.c30822.1 Carica papaya HOM05D002342 ORTHO05D002407 4.7e-15 84.7 71 60.6
DCAR_030811 Daucus carota HOM05D002342 ORTHO05D002407 4.7e-15 84.7 71 53.5
ECA246G4020 Erigeron canadensis HOM05D002342 ORTHO05D002407 4.7e-15 84.7 71 56.3
DCAR_002789 Daucus carota HOM05D002342 ORTHO05D002407 8.0e-15 84.0 69 59.4
FvH4_2g13620 Fragaria vesca HOM05D002342 ORTHO05D002407 8.0e-15 84.0 68 64.7
FAN15G0433 Fragaria x ananassa HOM05D002342 ORTHO05D002407 8.0e-15 84.0 68 64.7
FAN24G1108 Fragaria x ananassa HOM05D002342 ORTHO05D002407 8.0e-15 84.0 68 64.7
FAN27G2824 Fragaria x ananassa HOM05D002342 ORTHO05D002407 8.0e-15 84.0 68 64.7
Zm00001eb061370 Zea mays HOM05D002342 ORTHO05D002407 1.0e-14 83.6 72 59.7
VMungo1127G2260 Vigna mungo HOM05D002342 ORTHO05D002407 1.4e-14 83.2 70 55.7
COL.COLO4_20180 Corchorus olitorius HOM05D002342 ORTHO05D002407 1.8e-14 82.8 71 57.7
Eucgr.H02754 Eucalyptus grandis HOM05D002342 ORTHO05D002407 2.3e-14 82.4 70 52.9
Eucgr.H02757 Eucalyptus grandis HOM05D002342 ORTHO05D002407 2.3e-14 82.4 70 52.9
Eucgr.H02759 Eucalyptus grandis HOM05D002342 ORTHO05D002407 2.3e-14 82.4 70 52.9
Phvul.003G291200 Phaseolus vulgaris HOM05D002342 ORTHO05D002407 2.3e-14 82.4 70 55.7
Eucgr.H02762 Eucalyptus grandis HOM05D002342 ORTHO05D002407 3.0e-14 82.0 70 52.9
Eucgr.H02765 Eucalyptus grandis HOM05D002342 ORTHO05D002407 3.0e-14 82.0 70 54.3
Ca_17971_v3 Cicer arietinum L. HOM05D002342 ORTHO05D002407 6.7e-14 80.9 70 52.9
Aa31LG9G3860 Aethionema arabicum HOM05D002342 ORTHO05D002407 8.8e-14 80.5 71 57.7
Aa31LG9G3890 Aethionema arabicum HOM05D002342 ORTHO05D002407 8.8e-14 80.5 71 57.7
Cpa.g.sc83.15 Carica papaya HOM05D002342 ORTHO05D002407 8.8e-14 80.5 57 66.7
HPP92_003865 Vanilla planifolia HOM05D002342 ORTHO05D002407 8.8e-14 80.5 70 58.6
CAN.G1333.3 Capsicum annuum HOM05D002342 ORTHO05D002407 2.6e-13 79.0 69 55.1
RcHm_v2.0_Chr4g0414341 Rosa chinensis HOM05D002342 ORTHO05D002407 2.6e-13 79.0 85 49.4
CARHR219530 Cardamine hirsuta HOM05D002342 ORTHO05D002407 4.4e-13 78.2 71 59.2
HanXRQChr02g0059601 Helianthus annuus HOM05D002342 ORTHO05D002407 7.4e-13 77.4 56 69.6
HanXRQChr02g0059621 Helianthus annuus HOM05D002342 ORTHO05D002407 7.4e-13 77.4 56 69.6
AL7G42760 Arabidopsis lyrata HOM05D002342 ORTHO05D002407 1.3e-12 76.6 71 57.7
Sp7g11520 Schrenkiella parvula HOM05D002342 ORTHO05D002407 1.3e-12 76.6 70 58.6
AT4G13750 Arabidopsis thaliana HOM05D002342 ORTHO05D002407 1.7e-12 76.3 71 57.7
CANSAT78G2520 Cannabis sativa HOM05D002342 ORTHO05D002407 2.2e-12 75.9 69 52.2
Carub.0007s2871 Capsella rubella HOM05D002342 ORTHO05D002407 3.7e-12 75.1 71 56.3
BcaB04g17657 Brassica carinata HOM05D002342 ORTHO05D002407 6.3e-12 74.3 71 56.3
BcaC07g37335 Brassica carinata HOM05D002342 ORTHO05D002407 6.3e-12 74.3 71 56.3
A08p06660 Brassica napus HOM05D002342 ORTHO05D002407 6.3e-12 74.3 71 56.3
C08p07730 Brassica napus HOM05D002342 ORTHO05D002407 6.3e-12 74.3 71 56.3
BolC8t47622H Brassica oleracea HOM05D002342 ORTHO05D002407 6.3e-12 74.3 71 56.3
BraA08t32682Z Brassica rapa HOM05D002342 ORTHO05D002407 6.3e-12 74.3 71 56.3
ATR0829G112 Amborella trichopoda HOM05D002342 ORTHO05D002407 8.2e-12 73.9 72 51.4
FvH4_4g13620 Fragaria vesca HOM05D002342 ORTHO05D002407 8.2e-12 73.9 84 46.4
FvH4_4g13640 Fragaria vesca HOM05D002342 ORTHO05D002407 1.1e-11 73.6 84 46.4
FAN17G0157 Fragaria x ananassa HOM05D002342 ORTHO05D002407 1.1e-11 73.6 84 46.4
Sp1g06930 Schrenkiella parvula HOM05D002342 ORTHO05D002407 1.1e-11 73.6 70 57.1
Eucgr.H02755 Eucalyptus grandis HOM05D002342 ORTHO05D002407 1.4e-11 73.2 56 60.7
Thhalv10024181m.g Eutrema salsugineum HOM05D002342 ORTHO05D002407 1.8e-11 72.8 71 56.3
AT1G08300 Arabidopsis thaliana HOM05D002342 ORTHO05D002407 2.4e-11 72.4 70 55.7
Carub.0001s0765 Capsella rubella HOM05D002342 ORTHO05D002407 3.1e-11 72.0 70 55.7
CAN.G1333.6 Capsicum annuum HOM05D002342 ORTHO05D002407 3.1e-11 72.0 56 60.7
BcaB07g34076 Brassica carinata HOM05D000444 ORTHO05D000489 4.1e-11 71.6 70 55.7
A06p05320 Brassica napus HOM05D002342 ORTHO05D002407 4.1e-11 71.6 70 55.7
C05p06400 Brassica napus HOM05D002342 ORTHO05D002407 4.1e-11 71.6 70 55.7
BolC5t29395H Brassica oleracea HOM05D002342 ORTHO05D002407 4.1e-11 71.6 70 55.7
BraA06t23740Z Brassica rapa HOM05D002342 ORTHO05D002407 4.1e-11 71.6 70 55.7
AL1G18710 Arabidopsis lyrata HOM05D002342 ORTHO05D002407 5.3e-11 71.2 70 54.3
SHI00031 Sapria himalayana HOM05D002342 ORTHO05D002407 7.0e-11 70.9 70 50.0
Thhalv10006953m.g Eutrema salsugineum HOM05D002342 ORTHO05D002407 1.2e-10 70.1 70 52.9
TPR.G11869 Trifolium pratense HOM05D002342 ORTHO05D002407 2.0e-10 69.3 70 47.1
Duzib212G0344 Durio zibethinus HOM05D002342 ORTHO05D002407 3.5e-10 68.6 51 68.6
SEGI_10632 Sequoiadendron giganteum HOM05D002342 ORTHO05D002407 3.8e-09 65.1 71 42.3
SEGI_23744 Sequoiadendron giganteum HOM05D002342 ORTHO05D002407 3.8e-09 65.1 71 42.3
Pp3c21_20720 Physcomitrium patens HOM05D002342 ORTHO05D002407 8.5e-09 63.9 72 43.1
CARHR008160 Cardamine hirsuta HOM05D002342 ORTHO05D002407 2.5e-08 62.4 72 48.6
Mapoly0105s0052 Marchantia polymorpha HOM05D002342 ORTHO05D002407 2.5e-08 62.4 71 47.9
SMO337G0030 Selaginella moellendorffii HOM05D002342 ORTHO05D002407 4.2e-08 61.6 73 42.5
CBR_g6414 Chara braunii HOM05D002342 ORTHO05D002407 5.5e-08 61.2 77 41.6
Actinidia35855 Actinidia chinensis HOM05D002342 ORTHO05D002407 2.1e-07 59.3 46 60.9
VMungo1383G0106 Vigna mungo HOM05D002342 ORTHO05D002407 6.1e-07 57.8 45 55.6
RcHm_v2.0_Chr7g0213891 Rosa chinensis HOM05D002342 ORTHO05D002407 1.4e-06 56.6 34 70.6
AagrBONN_evm.TU.Sc2ySwM_228.1729 Anthoceros agrestis HOM05D002342 ORTHO05D002407 2.3e-06 55.8 71 43.7


User provided reference genes

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