Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0802 Trochodendron aralioides HOM05D006602 ORTHO05D007927 9.9e-59 229.9 119 100.0
TAR636G1896 Trochodendron aralioides HOM05D006602 ORTHO05D007927 1.1e-41 173.3 114 78.9
MBI10_g19236_MAGBIO Magnolia biondii HOM05D006602 ORTHO05D007927 6.2e-29 131.0 113 62.8
Nn2g12538 Nelumbo nucifera HOM05D006602 ORTHO05D007927 8.7e-23 110.5 115 57.4
GSVIVG01027871001 Vitis vinifera HOM05D006602 ORTHO05D007927 3.1e-20 102.1 98 60.2
CSS0038498 Camellia sinensis var. sinensis HOM05D006602 ORTHO05D007927 1.7e-18 96.3 112 52.7
Dinv27089 Davidia involucrata HOM05D006602 ORTHO05D007927 5.5e-17 91.3 113 50.4
Atru.chr4.1980 Acer truncatum HOM05D006602 ORTHO05D007927 7.2e-17 90.9 113 47.8
Haze_11431 Corylus avellana HOM05D006602 ORTHO05D003510 1.6e-16 89.7 95 52.6
Cpa.g.sc44.23 Carica papaya HOM05D006602 ORTHO05D007927 2.3e-15 85.9 116 49.1
Cfa014754 Carpinus fangiana HOM05D006602 ORTHO05D007927 3.9e-15 85.1 95 51.6
Lj6A624G54 Lonicera japonica HOM05D006602 ORTHO05D007927 3.9e-15 85.1 117 44.4
Rhsim02G0042400 Rhododendron simsii HOM05D006602 ORTHO05D007927 3.9e-15 85.1 107 51.4
QL06p020003 Quercus lobata HOM05D006602 ORTHO05D007927 6.7e-15 84.3 113 46.0
vmacro15464 Vaccinium macrocarpon HOM05D006602 ORTHO05D007927 6.7e-15 84.3 109 50.5
VMungo0720G1075 Vigna mungo HOM05D006602 ORTHO05D007927 8.8e-15 84.0 113 46.0
Thecc.04G260100 Theobroma cacao HOM05D006602 ORTHO05D007927 9.7e-14 80.5 112 42.9
Phvul.007G275200 Phaseolus vulgaris HOM05D006602 ORTHO05D007927 1.3e-13 80.1 113 44.2
CiPaw.01G180800 Carya illinoinensis HOM05D006602 ORTHO05D007927 2.8e-13 79.0 113 44.2
Duzib151G0058 Durio zibethinus HOM05D006602 ORTHO05D007927 6.3e-13 77.8 121 38.8
Ca_12140_v3 Cicer arietinum L. HOM05D006602 ORTHO05D007927 8.2e-13 77.4 113 44.2
Ca_12142_v3 Cicer arietinum L. HOM05D006602 ORTHO05D007927 8.2e-13 77.4 113 44.2
Ciclev10004248m.g Citrus clementina HOM05D006602 ORTHO05D007927 1.1e-12 77.0 113 43.4
Aqoxy5G00174 Aquilegia oxysepala HOM05D006602 ORTHO05D007927 4.1e-12 75.1 113 43.4
DCAR_002305 Daucus carota HOM05D006602 ORTHO05D007927 4.1e-12 75.1 100 49.0
Manes.03G161700 Manihot esculenta HOM05D006602 ORTHO05D007927 6.9e-12 74.3 114 45.6
TPR.G25155 Trifolium pratense HOM05D006602 ORTHO05D007927 9.1e-12 73.9 113 44.2
Lj6g0020892 Lotus japonicus HOM05D006602 ORTHO05D007927 2.0e-11 72.8 113 41.6
Oeu002938.1 Olea europaea HOM05D006602 ORTHO05D007927 2.0e-11 72.8 76 51.3
Oeu002939.1 Olea europaea HOM05D006602 ORTHO05D007927 2.0e-11 72.8 76 51.3
Glyma.10G005000 Glycine max HOM05D006602 ORTHO05D007927 7.7e-11 70.9 122 39.3
TWI09G0121 Tripterygium wilfordii HOM05D006602 ORTHO05D007927 2.2e-10 69.3 115 45.2
TWI09G1114 Tripterygium wilfordii HOM05D006602 ORTHO05D007927 2.2e-10 69.3 115 45.2
Potri.010G068400 Populus trichocarpa HOM05D006602 ORTHO05D007927 3.8e-10 68.6 117 39.3
COL.COLO4_15932 Corchorus olitorius HOM05D006602 ORTHO05D007927 5.0e-10 68.2 112 39.3
Sabra10G0038600 Salix brachista HOM05D006602 ORTHO05D007927 6.5e-10 67.8 113 39.8
Lalb_Chr01g0021011 Lupinus albus HOM05D006602 ORTHO05D007927 1.2e-08 63.5 114 39.5
Medtr1g041735 Medicago truncatula HOM05D006602 ORTHO05D007927 1.2e-08 63.5 112 40.2
CANSAT78G1730 Cannabis sativa HOM05D006602 ORTHO05D007927 1.6e-08 63.2 110 40.9
Peaxi162Scf00602g00056 Petunia axillaris HOM05D006602 ORTHO05D007927 1.6e-08 63.2 52 61.5
arahy.Tifrunner.gnm1.ann1.B5VTGG Arachis hypogaea HOM05D006602 ORTHO05D007927 3.6e-08 62.0 113 36.3
Lsat_1_v5_gn_1_75121 Lactuca sativa HOM05D006602 ORTHO05D007927 6.1e-08 61.2 108 40.7
SalBow3G2492 Salvia bowleyana HOM05D006602 ORTHO05D007927 1.0e-07 60.5 109 39.4
Psat6g105120 Pisum sativum HOM05D006602 ORTHO05D007927 1.4e-07 60.1 113 40.7
Gohir.D10G157900 Gossypium hirsutum HOM05D006602 ORTHO05D007927 2.3e-07 59.3 112 35.7
Gorai.011G177400 Gossypium raimondii HOM05D006602 ORTHO05D007927 2.3e-07 59.3 112 35.7
ClCG06G007140 Citrullus lanatus HOM05D006602 ORTHO05D007927 3.0e-07 58.9 114 37.7
Prupe.1G045200 Prunus persica HOM05D006602 ORTHO05D007927 3.0e-07 58.9 109 42.2
Gohir.A10G109300 Gossypium hirsutum HOM05D006602 ORTHO05D007927 3.9e-07 58.5 112 36.6
PSO423G0061 Papaver somniferum HOM05D006602 ORTHO05D007927 5.1e-07 58.2 116 34.5
RcHm_v2.0_Chr4g0394621 Rosa chinensis HOM05D006602 ORTHO05D007927 1.1e-06 57.0 88 44.3
Sabra08G0129700 Salix brachista HOM05D006602 ORTHO05D007927 2.6e-06 55.8 109 40.4
Thhalv10016212m.g Eutrema salsugineum HOM05D006602 ORTHO05D007927 4.4e-06 55.1 116 36.2
HanXRQChr04g0115381 Helianthus annuus HOM05D006602 ORTHO05D007927 4.4e-06 55.1 108 43.5
FvH4_4g04160 Fragaria vesca HOM05D006602 ORTHO05D007927 7.4e-06 54.3 87 42.5
FAN22G1758 Fragaria x ananassa HOM05D006602 ORTHO05D007927 7.4e-06 54.3 87 42.5


User provided reference genes

Program Settings