Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0772 Trochodendron aralioides HOM05D008469 ORTHO05D010507 2.6e-64 248.4 116 100.0
Dinv40304 Davidia involucrata HOM05D008469 ORTHO05D010507 6.8e-20 100.9 116 44.8
Nn3g21392 Nelumbo nucifera HOM05D008469 ORTHO05D010507 4.1e-17 91.7 113 44.2
GSVIVG01031088001 Vitis vinifera HOM05D008469 ORTHO05D010507 1.9e-14 82.8 94 47.9
Hma1.2p1_1334F.1_g276310 Hydrangea macrophylla HOM05D008469 ORTHO05D010507 6.1e-13 77.8 113 36.3
Potri.005G027500 Populus trichocarpa HOM05D008469 ORTHO05D010507 8.0e-13 77.4 114 36.0
TWI12G0878 Tripterygium wilfordii HOM05D008469 ORTHO05D010507 5.2e-12 74.7 113 31.9
Rhsim07G0185700 Rhododendron simsii HOM05D008469 ORTHO05D010507 8.8e-12 73.9 116 38.8
Prupe.6G323500 Prunus persica HOM05D008469 ORTHO05D010507 1.2e-11 73.6 112 38.4
Actinidia05687 Actinidia chinensis HOM05D008469 ORTHO05D010507 1.5e-11 73.2 113 36.3
FvH4_6g06210 Fragaria vesca HOM05D008469 ORTHO05D010507 5.7e-11 71.2 123 39.8
FAN05G3068 Fragaria x ananassa HOM05D008469 ORTHO05D010507 7.5e-11 70.9 113 37.2
FAN14G4354 Fragaria x ananassa HOM05D008469 ORTHO05D010507 9.8e-11 70.5 113 37.2
CDE08G0090 Ceratophyllum demersum HOM05D008469 ORTHO05D010507 1.7e-10 69.7 106 35.8
vmacro04974 Vaccinium macrocarpon HOM05D008469 ORTHO05D010507 2.2e-10 69.3 117 36.8
Cc02_g33250 Coffea canephora HOM05D008469 ORTHO05D010507 3.7e-10 68.6 52 53.8
FAN09G0741 Fragaria x ananassa HOM05D008469 ORTHO05D010507 3.7e-10 68.6 113 37.2
Thecc.05G310200 Theobroma cacao HOM05D008469 ORTHO05D010507 3.7e-10 68.6 114 36.8
Manes.08G119900 Manihot esculenta HOM05D008469 ORTHO05D010507 6.3e-10 67.8 113 37.2
QL03p007593 Quercus lobata HOM05D008469 ORTHO05D010507 1.8e-09 66.2 107 33.6
MD12G1217200 Malus domestica HOM05D008469 ORTHO05D010507 3.1e-09 65.5 68 42.6
Haze_04171 Corylus avellana HOM05D008469 ORTHO05D010507 4.1e-09 65.1 65 47.7
DCAR_029399 Daucus carota HOM05D008469 ORTHO05D010507 5.4e-09 64.7 50 60.0
CiPaw.07G019400 Carya illinoinensis HOM05D008469 ORTHO05D010507 7.0e-09 64.3 96 34.4
Eucgr.H04501 Eucalyptus grandis HOM05D008469 ORTHO05D010507 9.1e-09 63.9 51 47.1
Gohir.A11G266000 Gossypium hirsutum HOM05D008469 ORTHO05D010507 1.6e-08 63.2 111 36.0
Duzib106G0503 Durio zibethinus HOM05D008469 ORTHO05D010507 2.0e-08 62.8 114 33.3
QL03p007596 Quercus lobata HOM05D008469 ORTHO05D010507 2.0e-08 62.8 113 32.7
FAN02G3015 Fragaria x ananassa HOM05D008469 ORTHO05D010507 3.5e-08 62.0 113 35.4
Gorai.007G298400 Gossypium raimondii HOM05D008469 ORTHO05D010507 5.9e-08 61.2 111 34.2
Psat6g150680 Pisum sativum HOM05D008469 ORTHO05D010507 1.0e-07 60.5 98 35.7
Aqoxy2G03038 Aquilegia oxysepala HOM05D008469 ORTHO05D010507 1.3e-07 60.1 66 43.9
Lj5g0019669 Lotus japonicus HOM05D008469 ORTHO05D010507 2.9e-07 58.9 113 33.6
Lalb_Chr21g0310671 Lupinus albus HOM05D008469 ORTHO05D010507 2.9e-07 58.9 47 55.3
SHI24578 Sapria himalayana HOM05D008469 ORTHO05D010507 3.8e-07 58.5 92 32.6
CiPaw.11G067900 Carya illinoinensis HOM05D008469 ORTHO05D010507 8.6e-07 57.4 96 34.4
TPR.G6083 Trifolium pratense HOM05D008469 ORTHO05D010507 8.6e-07 57.4 97 36.1
Gohir.D11G276300 Gossypium hirsutum HOM05D008469 ORTHO05D010507 1.5e-06 56.6 111 34.2
Glyma.20G234700 Glycine max HOM05D008469 ORTHO05D010507 1.9e-06 56.2 48 54.2
PGR031G2494 Punica granatum HOM05D008469 ORTHO05D010507 1.9e-06 56.2 65 46.2
RcHm_v2.0_Chr3g0455231 Rosa chinensis HOM05D008469 ORTHO05D010507 3.3e-06 55.5 113 32.7
ECA246G4708 Erigeron canadensis HOM05D008469 ORTHO05D010507 4.2e-06 55.1 49 51.0
HPP92_026821 Vanilla planifolia HOM05D058775 ORTHO05D010507 9.5e-06 53.9 28 64.3


User provided reference genes

Program Settings