Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 7.0e-223 776.9 385 100.0
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 5.8e-100 368.6 260 77.7
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 3.9e-64 249.6 269 53.5
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 2.7e-57 226.9 252 54.8
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 1.3e-54 218.0 259 53.3
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 4.0e-53 213.0 241 54.8
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 2.5e-50 203.8 261 47.5
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 2.1e-49 200.7 246 50.0
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 1.0e-48 198.4 270 47.8
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 2.8e-46 190.3 259 45.9
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 3.7e-46 189.9 245 46.9
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 6.9e-45 185.7 264 42.4
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 1.3e-43 181.4 247 48.2
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 2.5e-42 177.2 232 47.4
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 6.1e-41 172.6 313 39.6
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 9.7e-39 165.2 275 41.5
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 2.8e-38 163.7 152 61.2
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 1.2e-36 158.3 246 42.3
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 2.6e-36 157.1 248 41.9
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 3.4e-36 156.8 248 42.7
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 7.7e-36 155.6 253 39.9
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 2.2e-35 154.1 253 43.5
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 4.2e-34 149.8 257 41.6
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 1.4e-32 144.8 248 41.1
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 6.7e-32 142.5 254 38.6
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 9.7e-31 138.7 247 39.3
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 2.2e-30 137.5 247 38.9
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 2.8e-30 137.1 248 40.7
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 1.1e-29 135.2 281 36.3
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 1.5e-28 131.3 174 45.4
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 1.0e-27 128.6 248 38.7
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 4.7e-25 119.8 259 33.6
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 3.9e-24 116.7 254 35.8
SEGI_26846 Sequoiadendron giganteum HOM05D007369 ORTHO05D009369 2.0e-23 114.4 155 39.4
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 2.6e-23 114.0 258 34.9
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 3.3e-23 113.6 261 36.4
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 1.3e-22 111.7 247 36.0
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 1.3e-22 111.7 182 39.0
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 2.8e-22 110.5 274 33.6
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 4.8e-22 109.8 239 36.4
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 6.3e-22 109.4 257 36.2
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 1.1e-21 108.6 249 32.5
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 2.4e-21 107.5 256 34.0
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 5.3e-21 106.3 250 34.0
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 2.0e-20 104.4 245 34.7
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 4.5e-20 103.2 177 40.7
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 1.7e-19 101.3 246 31.3
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 6.5e-19 99.4 248 31.9
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 1.1e-18 98.6 245 32.2
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 1.9e-18 97.8 243 32.9
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 1.9e-18 97.8 255 32.9
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 3.2e-18 97.1 251 31.1
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 1.6e-17 94.7 256 32.4
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 2.1e-17 94.4 260 32.7
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 2.7e-17 94.0 248 32.7
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.4e-16 91.7 248 32.3
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 4.0e-16 90.1 257 32.3
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 4.0e-16 90.1 248 32.3
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 4.0e-16 90.1 248 32.3
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 4.0e-16 90.1 248 32.3
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 5.2e-16 89.7 194 33.5
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 6.7e-16 89.4 248 31.5
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 6.7e-16 89.4 251 29.9
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.2e-14 84.3 246 30.5
TAR633G1701 Trochodendron aralioides HOM05D000001 ORTHO05D000003 1.2e-12 78.6 59 71.2
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 4.5e-12 76.6 182 31.9
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 1.3e-11 75.1 172 32.0
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 2.9e-11 73.9 251 28.3
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 5.0e-11 73.2 142 38.0
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 6.5e-11 72.8 173 30.6
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 4.2e-10 70.1 149 33.6
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 2.1e-09 67.8 173 32.4
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 2.7e-09 67.4 149 36.2
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 3.6e-09 67.0 174 29.3
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 1.4e-08 65.1 208 28.8
TAR381G0126 Trochodendron aralioides HOM05D000001 ORTHO05D414116 2.3e-08 64.3 35 82.9
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 4.0e-08 63.5 169 29.6
Nn2g13801 Nelumbo nucifera HOM05D000001 ORTHO05D000003 1.7e-06 58.2 45 57.8
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 3.7e-06 57.0 161 28.6


User provided reference genes

Program Settings