Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0405 Trochodendron aralioides HOM05D005852 ORTHO05D006688 1.3e-238 829.3 433 100.0
TAR362G0299 Trochodendron aralioides HOM05D005852 ORTHO05D006688 3.1e-158 562.4 420 72.6
GSVIVG01028150001 Vitis vinifera HOM05D005852 ORTHO05D006688 4.9e-156 555.1 419 70.6
Dinv33136 Davidia involucrata HOM05D005852 ORTHO05D006688 1.6e-154 550.1 448 67.0
CSS0024762 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 2.8e-143 512.7 421 66.3
Ciclev10023332m.g Citrus clementina HOM05D005852 ORTHO05D006688 8.9e-142 507.7 419 65.9
Duzib138G0780 Durio zibethinus HOM05D005852 ORTHO05D006688 7.6e-141 504.6 422 64.7
COL.COLO4_23201 Corchorus olitorius HOM05D005852 ORTHO05D006688 9.9e-141 504.2 419 65.2
QL12p019002 Quercus lobata HOM05D005852 ORTHO05D006688 3.8e-140 502.3 425 65.4
Thecc.01G317000 Theobroma cacao HOM05D005852 ORTHO05D006688 4.9e-140 501.9 418 65.3
Prupe.3G008300 Prunus persica HOM05D005852 ORTHO05D006688 1.1e-139 500.7 419 65.2
Manes.01G230200 Manihot esculenta HOM05D005852 ORTHO05D006688 2.4e-139 499.6 422 65.6
RcHm_v2.0_Chr3g0487181 Rosa chinensis HOM05D005852 ORTHO05D006688 3.9e-137 492.3 419 63.5
Actinidia17918 Actinidia chinensis HOM05D005852 ORTHO05D006688 1.5e-136 490.3 418 64.4
Hma1.2p1_0408F.1_g146510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 1.3e-135 487.3 418 64.8
MD17G1278200 Malus domestica HOM05D005852 ORTHO05D006688 1.3e-135 487.3 419 63.5
Haze_05075 Corylus avellana HOM05D005852 ORTHO05D006688 4.8e-135 485.3 452 60.4
FvH4_1g26940 Fragaria vesca HOM05D005852 ORTHO05D006688 1.1e-134 484.2 423 62.4
Aqoxy5G02690 Aquilegia oxysepala HOM05D005852 ORTHO05D006688 3.1e-134 482.6 432 62.0
FAN19G1535 Fragaria x ananassa HOM05D005852 ORTHO05D006688 3.1e-134 482.6 423 62.2
FAN26G2795 Fragaria x ananassa HOM05D005852 ORTHO05D006688 4.0e-134 482.3 423 62.2
Gorai.001G145000 Gossypium raimondii HOM05D005852 ORTHO05D006688 6.9e-134 481.5 420 62.1
Hma1.2p1_0486F.1_g163510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 9.0e-134 481.1 418 64.1
FAN28G0451 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.5e-133 480.3 423 61.9
Gohir.D07G133700 Gossypium hirsutum HOM05D005852 ORTHO05D006688 2.6e-133 479.6 418 62.2
FAN28G0588 Fragaria x ananassa HOM05D005852 ORTHO05D006688 3.4e-133 479.2 423 61.5
Atru.chr5.963 Acer truncatum HOM05D005852 ORTHO05D006688 9.9e-133 477.6 419 64.2
Duzib133G0199 Durio zibethinus HOM05D005852 ORTHO05D006688 1.3e-132 477.2 419 61.8
FAN23G1709 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.4e-131 473.8 423 61.2
Potri.002G192800 Populus trichocarpa HOM05D005852 ORTHO05D006688 3.2e-131 472.6 417 62.6
MD09G1285600 Malus domestica HOM05D005852 ORTHO05D006688 4.2e-131 472.2 419 61.6
Eucgr.K03554 Eucalyptus grandis HOM05D005852 ORTHO05D006688 9.3e-131 471.1 416 62.0
Rhsim13G0003100 Rhododendron simsii HOM05D005852 ORTHO05D006688 2.7e-130 469.5 441 59.9
TWI75G1100 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 1.3e-129 467.2 419 61.8
Cc08_g12410 Coffea canephora HOM05D005852 ORTHO05D006688 3.9e-129 465.7 420 61.0
vmacro02386 Vaccinium macrocarpon HOM05D005852 ORTHO05D006688 2.5e-128 463.0 441 59.2
Sopen08g027090 Solanum pennellii HOM05D005852 ORTHO05D006688 7.3e-128 461.5 420 61.2
Oeu002340.2 Olea europaea HOM05D005852 ORTHO05D006688 1.6e-127 460.3 415 61.2
PGSC0003DMG400004761 Solanum tuberosum HOM05D005852 ORTHO05D006688 3.1e-126 456.1 420 60.2
Nitab4.5_0014313g0030 Nicotiana tabacum HOM05D005852 ORTHO05D006688 4.0e-126 455.7 441 58.3
DCAR_002882 Daucus carota HOM05D005852 ORTHO05D006688 6.9e-126 454.9 418 61.2
Solyc08g078610.4 Solanum lycopersicum HOM05D005852 ORTHO05D006688 6.9e-126 454.9 422 60.4
MBI18_g35540_MAGBIO Magnolia biondii HOM05D005852 ORTHO05D006688 9.0e-126 454.5 451 55.4
arahy.Tifrunner.gnm1.ann1.BXR415 Arachis hypogaea HOM05D005852 ORTHO05D006688 1.2e-125 454.1 422 57.8
Peaxi162Scf00174g00140 Petunia axillaris HOM05D005852 ORTHO05D006688 1.2e-125 454.1 460 55.7
CAN.G1058.28 Capsicum annuum HOM05D005852 ORTHO05D006688 3.4e-125 452.6 426 58.9
Lj1g0015719 Lotus japonicus HOM05D005852 ORTHO05D006688 5.8e-125 451.8 414 58.5
Glyma.03G221000 Glycine max HOM05D005852 ORTHO05D006688 2.9e-124 449.5 420 57.9
Lalb_Chr18g0046571 Lupinus albus HOM05D005852 ORTHO05D006688 4.9e-124 448.7 420 59.0
TWI36G1268 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 1.1e-123 447.6 419 61.8
Phvul.001G214600 Phaseolus vulgaris HOM05D005852 ORTHO05D006688 1.4e-123 447.2 418 56.7
VMungo1383G3312 Vigna mungo HOM05D005852 ORTHO05D006688 3.2e-123 446.0 421 57.5
CsaV3_3G026570 Cucumis sativus L. HOM05D005852 ORTHO05D006688 7.1e-123 444.9 420 59.5
Nitab4.5_0000312g0040 Nicotiana tabacum HOM05D005852 ORTHO05D006688 7.1e-123 444.9 465 55.5
Potri.014G118100 Populus trichocarpa HOM05D005852 ORTHO05D006688 1.6e-122 443.7 409 60.4
arahy.Tifrunner.gnm1.ann1.8ZIL5S Arachis hypogaea HOM05D005852 ORTHO05D006688 1.3e-121 440.7 448 54.0
MSTRG.12100 Avicennia marina HOM05D005852 ORTHO05D006688 1.8e-121 440.3 427 56.9
ClCG10G011590 Citrullus lanatus HOM05D005852 ORTHO05D006688 1.8e-121 440.3 453 55.6
Glyma.19G218000 Glycine max HOM05D005852 ORTHO05D006688 3.9e-121 439.1 420 56.9
CSS0026378 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 1.1e-120 437.6 484 55.0
CANSAT25G1874 Cannabis sativa HOM05D005852 ORTHO05D006688 9.6e-120 434.5 375 63.2
Sabra02G0163100 Salix brachista HOM05D005852 ORTHO05D006688 9.6e-120 434.5 473 54.3
Migut.A00953 Erythranthe guttata HOM05D005852 ORTHO05D006688 9.0e-118 427.9 422 56.9
Oeu040211.2 Olea europaea HOM05D005852 ORTHO05D006688 1.0e-116 424.5 436 56.7
PGR044G1849 Punica granatum HOM05D005852 ORTHO05D006688 1.1e-115 421.0 417 58.0
ATR0693G434 Amborella trichopoda HOM05D005852 ORTHO05D006688 1.8e-113 413.7 432 53.7
PSO761G0671 Papaver somniferum HOM05D005852 ORTHO05D006688 7.4e-112 408.3 487 51.5
TPR.G4094 Trifolium pratense HOM05D005852 ORTHO05D006688 7.4e-112 408.3 452 49.6
Sc05g0000300 Simmondsia chinensis HOM05D005852 ORTHO05D006688 2.8e-111 406.4 419 56.3
MSTRG.25523 Avicennia marina HOM05D005852 ORTHO05D006688 1.4e-110 404.1 431 54.1
PSO210G2075 Papaver somniferum HOM05D005852 ORTHO05D006688 1.4e-110 404.1 487 51.3
Psat3g018920 Pisum sativum HOM05D005852 ORTHO05D006688 2.0e-109 400.2 427 50.8
CDE02G4238 Ceratophyllum demersum HOM05D005852 ORTHO05D006688 2.6e-109 399.8 429 55.7
Ca_09223_v3 Cicer arietinum L. HOM05D005852 ORTHO05D006688 3.4e-109 399.4 455 48.8
TAR633G0114 Trochodendron aralioides HOM05D005852 ORTHO05D006688 3.4e-109 399.4 352 63.6
THA.LOC104802145 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 8.4e-108 394.8 418 54.8
Lj1A15T56 Lonicera japonica HOM05D005852 ORTHO05D006688 1.9e-107 393.7 395 59.2
THA.LOC104817449 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 4.2e-107 392.5 417 54.9
SGA_v2.0_scaffold146G36149 Striga asiatica HOM05D005852 ORTHO05D006688 3.0e-105 386.3 460 50.7
Hund17504 Selenicereus undatus HOM05D005852 ORTHO05D006688 6.7e-105 385.2 464 49.6
CiPaw.08G087500 Carya illinoinensis HOM05D005852 ORTHO05D006688 9.7e-104 381.3 416 54.1
Sp5g01060 Schrenkiella parvula HOM05D005852 ORTHO05D006688 6.3e-103 378.6 425 53.9
Thhalv10005921m.g Eutrema salsugineum HOM05D005852 ORTHO05D006688 3.1e-102 376.3 430 55.3
Carub.0005s2904 Capsella rubella HOM05D005852 ORTHO05D006688 4.1e-102 375.9 423 53.7
EL10Ac1g01717 Beta vulgaris HOM05D005852 ORTHO05D006688 5.3e-102 375.6 469 49.7
Cpa.g.sc18.85 Carica papaya HOM05D005852 ORTHO05D006688 5.3e-102 375.6 347 62.8
AL2G23460 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 1.0e-100 371.3 425 54.4
CARHR172660 Cardamine hirsuta HOM05D005852 ORTHO05D006688 1.7e-100 370.5 426 53.8
MELO3C012930.2 Cucumis melo HOM05D005852 ORTHO05D006688 2.5e-99 366.7 339 61.7
AL5G45080 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 4.2e-99 365.9 425 53.9
ECA247G2785 Erigeron canadensis HOM05D005852 ORTHO05D006688 1.6e-98 364.0 419 49.9
Sed0012344 Sechium edule HOM05D005852 ORTHO05D006688 2.1e-98 363.6 338 59.2
AT3G62330 Arabidopsis thaliana HOM05D005852 ORTHO05D006688 3.6e-98 362.8 426 53.1
Ah.05g168400 Amaranthus hybridus HOM05D005852 ORTHO05D006688 7.9e-98 361.7 489 46.4
Lsat_1_v5_gn_8_166621 Lactuca sativa HOM05D005852 ORTHO05D006688 1.4e-97 360.9 419 53.0
A09p54330 Brassica napus HOM05D005852 ORTHO05D006688 3.9e-97 359.4 438 51.8
BolC8t51298H Brassica oleracea HOM05D005852 ORTHO05D006688 1.7e-95 354.0 438 50.0
BraA09t40845Z Brassica rapa HOM05D005852 ORTHO05D006688 6.9e-94 348.6 459 48.1
Aa31LG10G16270 Aethionema arabicum HOM05D005852 ORTHO05D006688 2.6e-93 346.7 494 46.6
unitig_21.g20328 Utricularia gibba HOM05D005852 ORTHO05D006688 4.5e-93 345.9 422 49.1
C08p37210 Brassica napus HOM05D005852 ORTHO05D006688 7.7e-93 345.1 438 49.1
SHI33189 Sapria himalayana HOM05D005852 ORTHO05D006688 1.7e-92 344.0 485 44.9
HanXRQChr10g0284731 Helianthus annuus HOM05D005852 ORTHO05D006688 5.7e-88 328.9 425 48.0
AUR62022309 Chenopodium quinoa HOM05D005852 ORTHO05D006688 3.9e-81 306.2 471 43.5
AUR62034930 Chenopodium quinoa HOM05D005852 ORTHO05D006688 5.7e-80 302.4 467 43.3
Gohir.A07G129400 Gossypium hirsutum HOM05D005852 ORTHO05D006688 2.6e-72 276.9 291 54.6
HPP92_012784 Vanilla planifolia HOM05D005852 ORTHO05D006688 6.3e-71 272.3 328 46.6
CiPaw.07G119700 Carya illinoinensis HOM05D005852 ORTHO05D006688 3.5e-69 266.5 243 63.0
Nn3g21757 Nelumbo nucifera HOM05D005852 ORTHO05D006688 6.3e-63 245.7 163 75.5
Hma1.2p1_0055F.1_g031510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 1.0e-60 238.4 185 68.6
SEGI_21105 Sequoiadendron giganteum HOM05D005852 ORTHO05D006688 4.4e-56 223.0 405 36.8
C02p35770 Brassica napus HOM05D005852 ORTHO05D006688 1.3e-55 221.5 172 66.3
Os01g0252900 Oryza sativa ssp. japonica HOM05D005852 ORTHO05D006688 4.9e-55 219.5 155 71.0
C02p58000 Brassica napus HOM05D005852 ORTHO05D006688 1.8e-54 217.6 172 65.1
Zm00001eb333730 Zea mays HOM05D005852 ORTHO05D006688 9.2e-54 215.3 157 70.1
BolC2t11869H Brassica oleracea HOM05D005852 ORTHO05D006688 1.0e-52 211.8 169 65.1
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 8.0e-50 202.2 470 32.6
CDE08G0400 Ceratophyllum demersum HOM05D004749 ORTHO05D005995 4.0e-49 199.9 175 60.0
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 1.3e-44 184.9 390 36.7
Nn4g25538 Nelumbo nucifera HOM05D005852 ORTHO05D006688 2.3e-41 174.1 378 33.3
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 4.0e-41 173.3 423 32.9
Pp3c2_16330 Physcomitrium patens HOM05D005852 ORTHO05D006688 4.3e-35 153.3 153 51.6
Pp3c1_21140 Physcomitrium patens HOM05D005852 ORTHO05D006688 1.6e-34 151.4 205 43.4
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 6.8e-33 146.0 415 32.0
BcaNung00812 Brassica carinata HOM05D005852 ORTHO05D006688 1.9e-27 127.9 97 66.0
SGA_v2.0_scaffold120G32887 Striga asiatica HOM05D005852 ORTHO05D006688 1.9e-27 127.9 121 55.4
AUR62032106 Chenopodium quinoa HOM05D005852 ORTHO05D006688 2.0e-24 117.9 340 30.3
CBR_g31172 Chara braunii HOM05D005852 ORTHO05D006688 7.6e-24 115.9 420 30.2
Nn3g21758 Nelumbo nucifera HOM05D005852 ORTHO05D006688 4.2e-22 110.2 80 66.2
Actinidia20978 Actinidia chinensis HOM05D005852 ORTHO05D006688 6.0e-21 106.3 102 57.8
BolC5t33669H Brassica oleracea HOM05D005852 ORTHO05D006688 3.0e-12 77.4 65 63.1
Lsat_1_v5_gn_3_89981 Lactuca sativa HOM05D005852 ORTHO05D006688 1.9e-11 74.7 41 80.5
ATR1120G017 Amborella trichopoda HOM05D005413 ORTHO05D006536 1.4e-06 58.5 197 28.4
CDE04G1023 Ceratophyllum demersum HOM05D005413 ORTHO05D006536 5.5e-06 56.6 138 31.2


User provided reference genes

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