Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0392 Trochodendron aralioides HOM05D000697 ORTHO05D000169 1.1e-40 169.5 80 100.0
TAR365G0994 Trochodendron aralioides HOM05D000697 ORTHO05D000169 1.3e-22 109.4 54 96.3
MBI19_g07239_MAGBIO Magnolia biondii HOM05D000697 ORTHO05D000169 6.7e-19 97.1 54 85.2
TAR362G0901 Trochodendron aralioides HOM05D000697 ORTHO05D000169 8.8e-19 96.7 52 88.5
TAR636G1432 Trochodendron aralioides HOM05D000697 ORTHO05D000169 8.8e-19 96.7 54 90.7
Aqoxy5G02880 Aquilegia oxysepala HOM05D000697 ORTHO05D000169 2.6e-18 95.1 54 87.0
Gohir.D07G132900 Gossypium hirsutum HOM05D000697 ORTHO05D000169 2.6e-18 95.1 53 84.9
Gorai.001G144200 Gossypium raimondii HOM05D000697 ORTHO05D000169 2.6e-18 95.1 53 84.9
MBI18_g17318_MAGBIO Magnolia biondii HOM05D000697 ORTHO05D000169 3.3e-18 94.7 54 79.6
Aqoxy2G02770 Aquilegia oxysepala HOM05D000697 ORTHO05D000169 9.7e-18 93.2 54 81.5
COL.COLO4_23232 Corchorus olitorius HOM05D000697 ORTHO05D000169 9.7e-18 93.2 53 83.0
PSO761G0678 Papaver somniferum HOM05D000697 ORTHO05D000169 9.7e-18 93.2 53 79.2
ATR0796G285 Amborella trichopoda HOM05D000697 ORTHO05D000169 3.7e-17 91.3 54 77.8
PSO210G6856 Papaver somniferum HOM05D000697 ORTHO05D000169 3.7e-17 91.3 53 77.4
Duzib133G0134 Durio zibethinus HOM05D000697 ORTHO05D000169 4.8e-17 90.9 53 83.0
TWI18G0286 Tripterygium wilfordii HOM05D000697 ORTHO05D000169 4.8e-17 90.9 53 81.1
Manes.05G003300 Manihot esculenta HOM05D000697 ORTHO05D000169 8.2e-17 90.1 54 79.6
PSO170G1051 Papaver somniferum HOM05D000697 ORTHO05D000169 1.1e-16 89.7 54 81.5
TWI36G1120 Tripterygium wilfordii HOM05D000697 ORTHO05D000169 1.1e-16 89.7 53 81.1
CDE02G3005 Ceratophyllum demersum HOM05D000697 ORTHO05D000169 3.1e-16 88.2 55 72.7
CDE08G1122 Ceratophyllum demersum HOM05D000697 ORTHO05D000169 3.1e-16 88.2 55 72.7
Eucgr.K03544 Eucalyptus grandis HOM05D000697 ORTHO05D000169 4.1e-16 87.8 55 78.2
Cpa.g.sc18.43 Carica papaya HOM05D000697 ORTHO05D000169 7.0e-16 87.0 53 77.4
Gohir.A07G128500 Gossypium hirsutum HOM05D000697 ORTHO05D000169 1.2e-15 86.3 53 81.1
Thecc.01G313300 Theobroma cacao HOM05D000697 ORTHO05D000169 1.6e-15 85.9 53 75.5
Eucgr.L01254 Eucalyptus grandis HOM05D000697 ORTHO05D000169 2.6e-15 85.1 51 78.4
Duzib138G1356 Durio zibethinus HOM05D000697 ORTHO05D000169 3.5e-15 84.7 53 79.2
PSO357G0541 Papaver somniferum HOM05D000697 ORTHO05D000169 3.5e-15 84.7 54 79.6
Potri.002G196200 Populus trichocarpa HOM05D000697 ORTHO05D000169 5.9e-15 84.0 53 75.5
Eucgr.H01022 Eucalyptus grandis HOM05D000697 ORTHO05D000169 7.7e-15 83.6 51 80.4
MD03G1295200 Malus domestica HOM05D000697 ORTHO05D000169 7.7e-15 83.6 53 77.4
Ciclev10022730m.g Citrus clementina HOM05D000697 ORTHO05D000169 1.0e-14 83.2 54 74.1
HPP92_013525 Vanilla planifolia HOM05D000697 ORTHO05D000169 1.3e-14 82.8 52 75.0
Duzib211G0124 Durio zibethinus HOM05D000697 ORTHO05D000169 1.7e-14 82.4 53 75.5
MD11G1314100 Malus domestica HOM05D000697 ORTHO05D000169 1.7e-14 82.4 53 77.4
CANSAT25G0922 Cannabis sativa HOM05D000697 ORTHO05D000169 3.8e-14 81.3 53 77.4
Gohir.D12G128700 Gossypium hirsutum HOM05D000697 ORTHO05D000169 3.8e-14 81.3 51 68.6
Actinidia20994 Actinidia chinensis HOM05D000697 ORTHO05D000169 5.0e-14 80.9 54 70.4
Atru.chr5.1001 Acer truncatum HOM05D000697 ORTHO05D000169 6.5e-14 80.5 53 75.5
Lsat_1_v5_gn_8_166781 Lactuca sativa HOM05D000697 ORTHO05D000169 1.1e-13 79.7 51 72.5
Actinidia25849 Actinidia chinensis HOM05D000697 ORTHO05D000169 1.5e-13 79.3 54 70.4
arahy.Tifrunner.gnm1.ann1.6JGL55 Arachis hypogaea HOM05D000697 ORTHO05D000169 1.5e-13 79.3 54 70.4
Hma1.2p1_0212F.1_g089940 Hydrangea macrophylla HOM05D000697 ORTHO05D000169 1.9e-13 79.0 54 70.4
PGR083G2421 Punica granatum HOM05D000697 ORTHO05D000169 1.9e-13 79.0 54 70.4
Gorai.008G139700 Gossypium raimondii HOM05D000697 ORTHO05D000169 2.5e-13 78.6 51 68.6
Migut.D00084 Erythranthe guttata HOM05D000697 ORTHO05D000169 3.2e-13 78.2 52 73.1
Manes.01G227900 Manihot esculenta HOM05D000697 ORTHO05D000169 3.2e-13 78.2 52 73.1
VMungo1383G1971 Vigna mungo HOM05D000697 ORTHO05D000169 3.2e-13 78.2 56 62.5
AL5G45220 Arabidopsis lyrata HOM05D000697 ORTHO05D000169 4.2e-13 77.8 53 67.9
Carub.0005s2914 Capsella rubella HOM05D000697 ORTHO05D000169 4.2e-13 77.8 53 67.9
ECA236G0269 Erigeron canadensis HOM05D000697 ORTHO05D000169 4.2e-13 77.8 53 67.9
HanXRQChr06g0168171 Helianthus annuus HOM05D000697 ORTHO05D000169 4.2e-13 77.8 54 68.5
PGR044G0370 Punica granatum HOM05D000697 ORTHO05D000169 4.2e-13 77.8 52 75.0
Aa31LG10G16350 Aethionema arabicum HOM05D000697 ORTHO05D000169 5.5e-13 77.4 53 66.0
ClCG10G011390 Citrullus lanatus HOM05D000697 ORTHO05D000169 5.5e-13 77.4 47 78.7
DCAR_002896 Daucus carota HOM05D000697 ORTHO05D000169 5.5e-13 77.4 45 77.8
DCAR_002897 Daucus carota HOM05D000697 ORTHO05D000169 5.5e-13 77.4 45 77.8
Lj1C17T9 Lonicera japonica HOM05D000697 ORTHO05D000169 5.5e-13 77.4 52 71.2
Oeu008473.1 Olea europaea HOM05D000697 ORTHO05D000169 5.5e-13 77.4 52 73.1
THA.LOC104800343 Tarenaya hassleriana HOM05D000697 ORTHO05D000169 5.5e-13 77.4 50 70.0
THA.LOC104800346 Tarenaya hassleriana HOM05D000697 ORTHO05D000169 5.5e-13 77.4 50 70.0
THA.LOC104827669 Tarenaya hassleriana HOM05D000697 ORTHO05D000169 5.5e-13 77.4 50 70.0
AT3G62420 Arabidopsis thaliana HOM05D000697 ORTHO05D000169 7.2e-13 77.0 52 69.2
CSS0031119 Camellia sinensis var. sinensis HOM05D000697 ORTHO05D000169 9.4e-13 76.6 54 68.5
Glyma.03G219300 Glycine max HOM05D000697 ORTHO05D000169 9.4e-13 76.6 56 64.3
Glyma.19G216200 Glycine max HOM05D000697 ORTHO05D000169 9.4e-13 76.6 56 64.3
Gohir.D11G114200 Gossypium hirsutum HOM05D000697 ORTHO05D000169 9.4e-13 76.6 53 71.7
Gorai.007G122800 Gossypium raimondii HOM05D000697 ORTHO05D000169 9.4e-13 76.6 53 71.7
HanXRQChr04g0106071 Helianthus annuus HOM05D000697 ORTHO05D000169 9.4e-13 76.6 54 68.5
Psat0s2991g0040 Pisum sativum HOM05D000697 ORTHO05D000169 9.4e-13 76.6 51 70.6
SalBow3G1328 Salvia bowleyana HOM05D000697 ORTHO05D000169 9.4e-13 76.6 52 71.2
Sp5g00990 Schrenkiella parvula HOM05D000697 ORTHO05D000169 9.4e-13 76.6 53 67.9
unitig_736.g22936 Utricularia gibba HOM05D000697 ORTHO05D000169 9.4e-13 76.6 52 69.2
CSS0019770 Camellia sinensis var. sinensis HOM05D000697 ORTHO05D000169 1.2e-12 76.3 46 78.3
CSS0025819 Camellia sinensis var. sinensis HOM05D000697 ORTHO05D000169 1.2e-12 76.3 46 78.3
CiPaw.07G117500 Carya illinoinensis HOM05D000697 ORTHO05D000169 1.2e-12 76.3 52 73.1
CsaV3_4G001220 Cucumis sativus L. HOM05D000697 ORTHO05D000169 1.2e-12 76.3 53 71.7
Phvul.001G212800 Phaseolus vulgaris HOM05D000697 ORTHO05D000169 1.2e-12 76.3 56 62.5
AUR62011806 Chenopodium quinoa HOM05D000697 ORTHO05D000169 1.6e-12 75.9 48 72.9
AUR62024652 Chenopodium quinoa HOM05D000697 ORTHO05D000169 1.6e-12 75.9 48 72.9
MELO3C017918.2 Cucumis melo HOM05D000697 ORTHO05D000169 1.6e-12 75.9 47 76.6
Thhalv10006418m.g Eutrema salsugineum HOM05D000697 ORTHO05D000169 1.6e-12 75.9 53 66.0
Prupe.8G267100 Prunus persica HOM05D000697 ORTHO05D000169 2.1e-12 75.5 54 70.4
Ca_09210_v3 Cicer arietinum L. HOM05D000697 ORTHO05D000169 2.7e-12 75.1 53 67.9
Dinv10098 Davidia involucrata HOM05D000697 ORTHO05D000169 4.7e-12 74.3 54 66.7
QL12p019949 Quercus lobata HOM05D000697 ORTHO05D000169 6.1e-12 73.9 52 67.3
PGR083G0289 Punica granatum HOM05D000697 ORTHO05D000169 8.0e-12 73.6 52 71.2
Oeu038018.1 Olea europaea HOM05D000697 ORTHO05D000169 1.4e-11 72.8 54 64.8
EL10As5g23530 Beta vulgaris HOM05D000697 ORTHO05D000169 1.8e-11 72.4 48 68.8
THA.LOC104817459 Tarenaya hassleriana HOM05D000697 ORTHO05D000169 1.8e-11 72.4 52 67.3
Sed0010222 Sechium edule HOM05D000697 ORTHO05D000169 2.3e-11 72.0 55 65.5
TPR.G4035 Trifolium pratense HOM05D000697 ORTHO05D000169 2.3e-11 72.0 54 66.7
Ah.02g112290 Amaranthus hybridus HOM05D000697 ORTHO05D000169 3.0e-11 71.6 48 64.6
MSTRG.21686 Avicennia marina HOM05D000697 ORTHO05D000169 3.0e-11 71.6 52 69.2
CAN.G777.13 Capsicum annuum HOM05D000697 ORTHO05D000169 3.0e-11 71.6 53 64.2
Lj5g0026084 Lotus japonicus HOM05D000697 ORTHO05D000169 3.0e-11 71.6 51 64.7
Nitab4.5_0003540g0010 Nicotiana tabacum HOM05D000697 ORTHO05D000169 3.0e-11 71.6 54 63.0
Nitab4.5_0008277g0020 Nicotiana tabacum HOM05D000697 ORTHO05D000169 4.0e-11 71.2 54 63.0
Solyc01g079480.3 Solanum lycopersicum HOM05D000697 ORTHO05D000169 4.0e-11 71.2 54 63.0
Sopen01g031250 Solanum pennellii HOM05D000697 ORTHO05D000169 4.0e-11 71.2 54 63.0
Cfa005801 Carpinus fangiana HOM05D000697 ORTHO05D000169 5.2e-11 70.9 51 68.6
HanXRQChr01g0000781 Helianthus annuus HOM05D000697 ORTHO05D000169 5.2e-11 70.9 50 60.0
Haze_05040 Corylus avellana HOM05D000697 ORTHO05D000169 6.7e-11 70.5 53 67.9
Gohir.A12G125000 Gossypium hirsutum HOM05D000697 ORTHO05D000169 6.7e-11 70.5 51 62.7
SalBow2G3006 Salvia bowleyana HOM05D000697 ORTHO05D000169 8.8e-11 70.1 52 65.4
Gohir.A11G110000 Gossypium hirsutum HOM05D000697 ORTHO05D000169 1.1e-10 69.7 49 69.4
Nitab4.5_0000363g0280 Nicotiana tabacum HOM05D000697 ORTHO05D000169 1.5e-10 69.3 53 60.4
Sed0003599 Sechium edule HOM05D000697 ORTHO05D000169 1.5e-10 69.3 43 76.7
GSVIVG01031238001 Vitis vinifera HOM05D000697 ORTHO05D000169 1.5e-10 69.3 54 63.0
BcaB02g07337 Brassica carinata HOM05D000697 ORTHO05D000169 2.6e-10 68.6 55 60.0
Solyc06g009640.2 Solanum lycopersicum HOM05D000697 ORTHO05D000169 2.6e-10 68.6 51 60.8
Sopen06g004280 Solanum pennellii HOM05D000697 ORTHO05D000169 2.6e-10 68.6 51 60.8
PGSC0003DMG400007301 Solanum tuberosum HOM05D000697 ORTHO05D000169 2.6e-10 68.6 51 60.8
Lj1g0028029 Lotus japonicus HOM05D000697 ORTHO05D000169 3.3e-10 68.2 51 62.7
Rhsim01G0290700 Rhododendron simsii HOM05D000697 ORTHO05D000169 4.4e-10 67.8 54 59.3
MSTRG.18103 Avicennia marina HOM05D000697 ORTHO05D000169 5.7e-10 67.4 51 60.8
C08p37270 Brassica napus HOM05D000697 ORTHO05D000169 5.7e-10 67.4 52 67.3
BolC8t51305H Brassica oleracea HOM05D000697 ORTHO05D000169 5.7e-10 67.4 52 67.3
PGSC0003DMG400037737 Solanum tuberosum HOM05D000697 ORTHO05D000169 7.5e-10 67.0 54 61.1
Ah.11g049250 Amaranthus hybridus HOM05D000697 ORTHO05D000169 9.7e-10 66.6 43 69.8
CARHR172750 Cardamine hirsuta HOM05D000697 ORTHO05D000169 9.7e-10 66.6 43 67.4
SGA_v2.0_scaffold198G41122 Striga asiatica HOM05D000697 ORTHO05D000169 9.7e-10 66.6 51 60.8
SGA_v2.0_scaffold334G49066 Striga asiatica HOM05D000697 ORTHO05D000169 1.3e-09 66.2 49 61.2
HPP92_003568 Vanilla planifolia HOM05D000697 ORTHO05D000169 1.3e-09 66.2 54 55.6
Sc17g0000450 Simmondsia chinensis HOM05D000697 ORTHO05D000169 1.7e-09 65.9 42 76.2
ATR0585G084 Amborella trichopoda HOM05D000697 ORTHO05D000169 2.2e-09 65.5 37 75.7
BraA09t40851Z Brassica rapa HOM05D000697 ORTHO05D000169 2.2e-09 65.5 52 65.4
unitig_52.g16900 Utricularia gibba HOM05D000697 ORTHO05D000169 2.2e-09 65.5 54 61.1
HPP92_026865 Vanilla planifolia HOM05D000697 ORTHO05D000169 2.2e-09 65.5 52 59.6
BcaC07g40726 Brassica carinata HOM05D000697 ORTHO05D000169 2.8e-09 65.1 52 65.4
BcaC07g42753 Brassica carinata HOM05D000697 ORTHO05D000169 2.8e-09 65.1 52 65.4
BcaC07g42759 Brassica carinata HOM05D000697 ORTHO05D000169 2.8e-09 65.1 52 65.4
A09p54390 Brassica napus HOM05D000697 ORTHO05D000169 2.8e-09 65.1 52 65.4
Peaxi162Scf00691g00021 Petunia axillaris HOM05D000697 ORTHO05D000169 2.8e-09 65.1 45 62.2
Potri.014G120800 Populus trichocarpa HOM05D000697 ORTHO05D000169 2.8e-09 65.1 52 59.6
Dinv33115 Davidia involucrata HOM05D000697 ORTHO05D000169 3.7e-09 64.7 40 72.5
Nitab4.5_0007407g0030 Nicotiana tabacum HOM05D000697 ORTHO05D000169 3.7e-09 64.7 53 56.6
SGA_v2.0_scaffold36G14321 Striga asiatica HOM05D000697 ORTHO05D000169 8.2e-09 63.5 49 59.2
Dinv24443 Davidia involucrata HOM05D000697 ORTHO05D000169 1.4e-08 62.8 50 62.0
Peaxi162Scf00058g00267 Petunia axillaris HOM05D000697 ORTHO05D000169 1.4e-08 62.8 50 56.0
DCAR_005758 Daucus carota HOM05D000697 ORTHO05D000169 1.8e-08 62.4 59 61.0
unitig_62.g23907 Utricularia gibba HOM05D004856 ORTHO05D005710 1.8e-08 62.4 59 52.5
THA.LOC104802154 Tarenaya hassleriana HOM05D000697 ORTHO05D000169 2.4e-08 62.0 41 65.9
Lalb_Chr06g0166861 Lupinus albus HOM05D000697 ORTHO05D000169 3.1e-08 61.6 55 58.2
Cc01_g21420 Coffea canephora HOM05D000697 ORTHO05D000169 5.3e-08 60.8 47 57.4
Nn3g21690 Nelumbo nucifera HOM05D000697 ORTHO05D000169 5.3e-08 60.8 53 56.6
HPP92_027778 Vanilla planifolia HOM05D000697 ORTHO05D000169 9.1e-08 60.1 54 50.0
CAN.G1280.27 Capsicum annuum HOM05D000697 ORTHO05D000169 2.0e-07 58.9 51 51.0
vmacro01562 Vaccinium macrocarpon HOM05D000697 ORTHO05D000169 2.0e-07 58.9 50 56.0
BcaC08g45201 Brassica carinata HOM05D000697 ORTHO05D000169 3.5e-07 58.2 55 56.4
A07p25990 Brassica napus HOM05D000697 ORTHO05D000169 3.5e-07 58.2 55 56.4
C06p28270 Brassica napus HOM05D000697 ORTHO05D000169 3.5e-07 58.2 55 56.4
BolC6t37997H Brassica oleracea HOM05D000697 ORTHO05D000169 3.5e-07 58.2 55 56.4
Gorai.004G050400 Gossypium raimondii HOM05D000697 ORTHO05D000169 7.7e-07 57.0 44 68.2
BraA07t30246Z Brassica rapa HOM05D000697 ORTHO05D000169 1.7e-06 55.8 55 54.5
Glyma.02G012700 Glycine max HOM05D000697 ORTHO05D000169 1.7e-06 55.8 43 55.8
Gohir.D08G050800 Gossypium hirsutum HOM05D000697 ORTHO05D000169 2.2e-06 55.5 45 64.4
BcaC06g31568 Brassica carinata HOM05D000005 ORTHO05D000012 3.8e-06 54.7 51 56.9
Glyma.10G013300 Glycine max HOM05D000697 ORTHO05D000169 3.8e-06 54.7 56 53.6
Thhalv10001214m.g Eutrema salsugineum HOM05D000697 ORTHO05D000169 5.0e-06 54.3 51 56.9
Gohir.A08G040700 Gossypium hirsutum HOM05D000697 ORTHO05D000169 5.0e-06 54.3 44 63.6
Ca_10284_v3 Cicer arietinum L. HOM05D000697 ORTHO05D000169 8.5e-06 53.5 53 52.8
Lalb_Chr21g0309581 Lupinus albus HOM05D000697 ORTHO05D000169 8.5e-06 53.5 59 47.5


User provided reference genes

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