Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0355 Trochodendron aralioides HOM05D004173 ORTHO05D004885 8.9e-156 553.5 271 100.0
TAR365G1150 Trochodendron aralioides HOM05D004173 ORTHO05D004885 1.7e-154 549.3 271 98.9
MBI18_g38876_MAGBIO Magnolia biondii HOM05D004173 ORTHO05D004885 1.7e-50 203.8 218 52.3
Aqoxy5G02899 Aquilegia oxysepala HOM05D004173 ORTHO05D004885 1.5e-49 200.7 276 44.9
PSO675G3687 Papaver somniferum HOM05D004173 ORTHO05D004885 7.8e-43 178.3 184 54.9
PSO104G0082 Papaver somniferum HOM05D004173 ORTHO05D004885 7.3e-41 171.8 199 49.2
Nn2g10306 Nelumbo nucifera HOM05D004173 ORTHO05D004885 1.2e-40 171.0 259 42.5
CSS0041127 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 6.2e-40 168.7 186 51.1
CSS0049649 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 6.2e-40 168.7 186 51.1
PSO421G0661 Papaver somniferum HOM05D004173 ORTHO05D004885 6.2e-40 168.7 184 52.7
PSO063G2850 Papaver somniferum HOM05D004173 ORTHO05D004885 1.1e-39 167.9 265 40.8
HPP92_012755 Vanilla planifolia HOM05D004173 ORTHO05D004885 8.9e-39 164.9 184 47.8
Nn5g26849 Nelumbo nucifera HOM05D004173 ORTHO05D004885 1.2e-38 164.5 285 40.4
MSTRG.18054 Avicennia marina HOM05D004173 ORTHO05D004885 1.5e-38 164.1 165 49.1
Cc10_g16360 Coffea canephora HOM05D004173 ORTHO05D004885 9.8e-38 161.4 183 47.5
Oeu025786.2 Olea europaea HOM05D004173 ORTHO05D004885 1.3e-37 161.0 207 44.0
Zm00001eb215400 Zea mays HOM05D004173 ORTHO05D004885 3.7e-37 159.5 166 46.4
Zm00001eb056440 Zea mays HOM05D004173 ORTHO05D004885 1.1e-36 157.9 166 47.0
PSO266G0063 Papaver somniferum HOM05D004173 ORTHO05D004885 1.2e-35 154.5 197 45.2
Dinv34482 Davidia involucrata HOM05D004173 ORTHO05D004885 1.6e-35 154.1 177 48.0
ATR0776G079 Amborella trichopoda HOM05D004173 ORTHO05D004885 2.1e-35 153.7 186 46.8
PSO478G3294 Papaver somniferum HOM05D004173 ORTHO05D004885 2.7e-35 153.3 278 39.2
ATR0124G034 Amborella trichopoda HOM05D004173 ORTHO05D004885 1.0e-34 151.4 180 48.3
vmacro09960 Vaccinium macrocarpon HOM05D004173 ORTHO05D004885 3.6e-32 142.9 168 46.4
Os03g0736900 Oryza sativa ssp. japonica HOM05D004173 ORTHO05D004885 4.7e-32 142.5 162 46.3
Duzib114G0418 Durio zibethinus HOM05D004173 ORTHO05D004885 2.3e-31 140.2 205 39.0
Cpa.g.sc19.59 Carica papaya HOM05D004173 ORTHO05D004885 5.2e-31 139.0 245 38.0
Sc10g0002990 Simmondsia chinensis HOM05D004173 ORTHO05D004885 5.2e-31 139.0 164 46.3
Lalb_Chr23g0272221 Lupinus albus HOM05D004173 ORTHO05D004885 2.0e-30 137.1 177 43.5
Gohir.D05G280200 Gossypium hirsutum HOM05D004173 ORTHO05D004885 3.4e-30 136.3 167 43.1
Hma1.2p1_0264F.1_g106180 Hydrangea macrophylla HOM05D004173 ORTHO05D004885 1.3e-29 134.4 180 43.9
Actinidia00999 Actinidia chinensis HOM05D004173 ORTHO05D004885 1.7e-29 134.0 169 45.6
CARHR166510 Cardamine hirsuta HOM05D004173 ORTHO05D004885 1.7e-29 134.0 225 39.6
Thhalv10006215m.g Eutrema salsugineum HOM05D004173 ORTHO05D004885 2.2e-29 133.7 166 47.6
Gohir.A05G278500 Gossypium hirsutum HOM05D004173 ORTHO05D004885 2.9e-29 133.3 167 42.5
Gorai.009G293700 Gossypium raimondii HOM05D004173 ORTHO05D004885 2.9e-29 133.3 167 41.3
Rhsim09G0185800 Rhododendron simsii HOM05D004173 ORTHO05D004885 3.7e-29 132.9 162 45.7
BcaC07g39950 Brassica carinata HOM05D004173 ORTHO05D004885 4.9e-29 132.5 164 45.1
CDE02G3998 Ceratophyllum demersum HOM05D004173 ORTHO05D004885 4.9e-29 132.5 188 43.1
Thecc.10G181100 Theobroma cacao HOM05D004173 ORTHO05D004885 8.3e-29 131.7 221 37.1
CsaV3_6G002310 Cucumis sativus L. HOM05D004173 ORTHO05D004885 1.1e-28 131.3 175 41.7
AL5G37690 Arabidopsis lyrata HOM05D004173 ORTHO05D004885 1.4e-28 131.0 166 47.0
AT3G56360 Arabidopsis thaliana HOM05D004173 ORTHO05D004885 1.4e-28 131.0 166 45.8
Carub.0005s2314 Capsella rubella HOM05D004173 ORTHO05D004885 1.4e-28 131.0 169 45.6
Sp5g06150 Schrenkiella parvula HOM05D004173 ORTHO05D004885 1.4e-28 131.0 172 44.8
Ah.12g064380 Amaranthus hybridus HOM05D004173 ORTHO05D004885 1.9e-28 130.6 163 47.9
AUR62024933 Chenopodium quinoa HOM05D004173 ORTHO05D004885 1.9e-28 130.6 162 48.8
MELO3C020007.2 Cucumis melo HOM05D004173 ORTHO05D004885 2.4e-28 130.2 175 41.7
Ciclev10032642m.g Citrus clementina HOM05D004173 ORTHO05D004885 4.1e-28 129.4 184 40.2
FAN03G3439 Fragaria x ananassa HOM05D004173 ORTHO05D004885 4.1e-28 129.4 222 37.4
MD07G1233600 Malus domestica HOM05D004173 ORTHO05D004885 4.1e-28 129.4 230 37.4
Nitab4.5_0000171g0010 Nicotiana tabacum HOM05D004173 ORTHO05D004885 4.1e-28 129.4 175 40.6
PGSC0003DMG400011642 Solanum tuberosum HOM05D004173 ORTHO05D004885 4.1e-28 129.4 175 40.6
Aa31LG10G11250 Aethionema arabicum HOM05D004173 ORTHO05D004885 5.4e-28 129.0 169 42.0
Migut.F00606 Erythranthe guttata HOM05D004173 ORTHO05D004885 5.4e-28 129.0 186 39.8
Nitab4.5_0002279g0040 Nicotiana tabacum HOM05D004173 ORTHO05D004885 5.4e-28 129.0 168 41.7
A10p30940 Brassica napus HOM05D004173 ORTHO05D004885 7.1e-28 128.6 215 37.7
BraA10t45139Z Brassica rapa HOM05D004173 ORTHO05D004885 7.1e-28 128.6 215 37.7
RcHm_v2.0_Chr1g0372231 Rosa chinensis HOM05D004173 ORTHO05D004885 7.1e-28 128.6 218 37.6
CAN.G24.14 Capsicum annuum HOM05D004173 ORTHO05D004885 9.2e-28 128.3 168 40.5
FvH4_7g25910 Fragaria vesca HOM05D004173 ORTHO05D004885 9.2e-28 128.3 215 37.7
FAN06G1323 Fragaria x ananassa HOM05D004173 ORTHO05D004885 9.2e-28 128.3 215 37.7
C09p71450 Brassica napus HOM05D004173 ORTHO05D004885 1.2e-27 127.9 166 43.4
BolC4t25192H Brassica oleracea HOM05D004173 ORTHO05D004885 1.2e-27 127.9 166 44.6
BolC9t59908H Brassica oleracea HOM05D004173 ORTHO05D004885 1.2e-27 127.9 166 43.4
Eucgr.J00114 Eucalyptus grandis HOM05D004173 ORTHO05D004885 1.2e-27 127.9 172 42.4
BcaC07g39948 Brassica carinata HOM05D004173 ORTHO05D004885 1.6e-27 127.5 166 44.0
C08p31680 Brassica napus HOM05D004173 ORTHO05D004885 1.6e-27 127.5 166 44.0
FAN10G3668 Fragaria x ananassa HOM05D004173 ORTHO05D004885 1.6e-27 127.5 174 42.0
Lalb_Chr23g0272201 Lupinus albus HOM05D004173 ORTHO05D004885 1.6e-27 127.5 190 37.9
Oeu063983.1 Olea europaea HOM05D004173 ORTHO05D004885 1.6e-27 127.5 177 40.7
arahy.Tifrunner.gnm1.ann1.7F477P Arachis hypogaea HOM05D004173 ORTHO05D004885 2.1e-27 127.1 171 42.1
Solyc06g049020.1 Solanum lycopersicum HOM05D004173 ORTHO05D004885 2.1e-27 127.1 169 42.0
Sopen06g015380 Solanum pennellii HOM05D004173 ORTHO05D004885 2.1e-27 127.1 169 42.0
THA.LOC104824365 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 2.1e-27 127.1 171 44.4
BcaC02g09832 Brassica carinata HOM05D004173 ORTHO05D004885 2.7e-27 126.7 166 44.0
A09p49310 Brassica napus HOM05D004173 ORTHO05D004885 2.7e-27 126.7 166 42.8
C04p36060 Brassica napus HOM05D004173 ORTHO05D004885 2.7e-27 126.7 166 44.0
BraA09t40385Z Brassica rapa HOM05D004173 ORTHO05D004885 2.7e-27 126.7 166 42.8
Prupe.2G264000 Prunus persica HOM05D004173 ORTHO05D004885 2.7e-27 126.7 174 43.1
Sc05g0006880 Simmondsia chinensis HOM05D004173 ORTHO05D004885 3.5e-27 126.3 149 43.6
CDE04G1376 Ceratophyllum demersum HOM05D004173 ORTHO05D004885 4.6e-27 125.9 173 42.2
PGSC0003DMG400016638 Solanum tuberosum HOM05D004173 ORTHO05D004885 4.6e-27 125.9 169 41.4
A04p03290 Brassica napus HOM05D004173 ORTHO05D004885 6.0e-27 125.6 166 44.0
BraA04t16106Z Brassica rapa HOM05D004173 ORTHO05D004885 6.0e-27 125.6 166 44.0
THA.LOC104813511 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 6.0e-27 125.6 174 42.5
Psat5g068840 Pisum sativum HOM05D004173 ORTHO05D004885 7.8e-27 125.2 175 42.3
BolC8t50789H Brassica oleracea HOM05D004173 ORTHO05D004885 1.0e-26 124.8 166 43.4
CSS0045557 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 1.0e-26 124.8 169 43.2
Medtr3g093970 Medicago truncatula HOM05D004173 ORTHO05D004885 1.0e-26 124.8 174 43.1
Sed0028126 Sechium edule HOM05D004173 ORTHO05D004885 1.0e-26 124.8 170 41.8
CAN.G100.76 Capsicum annuum HOM05D004173 ORTHO05D004885 1.3e-26 124.4 171 40.4
MD01G1167600 Malus domestica HOM05D004173 ORTHO05D004885 1.3e-26 124.4 174 43.7
AL6G15090 Arabidopsis lyrata HOM05D004173 ORTHO05D004885 1.7e-26 124.0 169 42.0
BcaB02g08372 Brassica carinata HOM05D004173 ORTHO05D004885 1.7e-26 124.0 166 44.0
DCAR_014665 Daucus carota HOM05D004173 ORTHO05D004885 1.7e-26 124.0 186 39.2
Manes.10G001300 Manihot esculenta HOM05D004173 ORTHO05D004885 1.7e-26 124.0 179 40.8
THA.LOC104803208 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 2.3e-26 123.6 169 43.2
Duzib128G1795 Durio zibethinus HOM05D004173 ORTHO05D004885 3.0e-26 123.2 169 39.1
Sopen05g030770 Solanum pennellii HOM05D004173 ORTHO05D004885 3.0e-26 123.2 183 39.3
Peaxi162Scf00739g00035 Petunia axillaris HOM05D004173 ORTHO05D004885 3.9e-26 122.9 171 40.4
Sp6g37580 Schrenkiella parvula HOM05D004173 ORTHO05D004885 3.9e-26 122.9 232 34.9
VMungo1309G0457 Vigna mungo HOM05D004173 ORTHO05D004885 3.9e-26 122.9 179 41.3
Manes.07G143600 Manihot esculenta HOM05D004173 ORTHO05D004885 5.1e-26 122.5 172 42.4
Phvul.009G044100 Phaseolus vulgaris HOM05D004173 ORTHO05D004885 5.1e-26 122.5 178 39.9
TPR.G1732 Trifolium pratense HOM05D004173 ORTHO05D004885 5.1e-26 122.5 173 39.9
AT5G05250 Arabidopsis thaliana HOM05D004173 ORTHO05D004885 8.6e-26 121.7 167 41.3
Carub.0006s0418 Capsella rubella HOM05D004173 ORTHO05D004885 8.6e-26 121.7 167 41.3
Ca_16866_v3 Cicer arietinum L. HOM05D004173 ORTHO05D004885 8.6e-26 121.7 174 42.0
Ca_29953_v3 Cicer arietinum L. HOM05D004173 ORTHO05D004885 8.6e-26 121.7 174 42.0
Potri.019G058000 Populus trichocarpa HOM05D004173 ORTHO05D004885 8.6e-26 121.7 169 42.0
CARHR207980 Cardamine hirsuta HOM05D004173 ORTHO05D004885 1.1e-25 121.3 165 41.8
Glyma.06G142900 Glycine max HOM05D004173 ORTHO05D004885 1.5e-25 120.9 174 42.0
Atru.chr12.182 Acer truncatum HOM05D004173 ORTHO05D004885 1.9e-25 120.6 213 37.1
SEGI_03811 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 2.5e-25 120.2 167 41.9
Manes.07G141000 Manihot esculenta HOM05D004173 ORTHO05D004885 3.3e-25 119.8 172 42.4
AUR62030611 Chenopodium quinoa HOM05D004173 ORTHO05D004885 4.3e-25 119.4 150 49.3
Glyma.04G222500 Glycine max HOM05D004173 ORTHO05D004885 4.3e-25 119.4 174 40.2
SEGI_33270 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 4.3e-25 119.4 167 40.7
Thhalv10014558m.g Eutrema salsugineum HOM05D004173 ORTHO05D004885 1.2e-24 117.9 170 39.4
TWI73G0681 Tripterygium wilfordii HOM05D004173 ORTHO05D004885 1.2e-24 117.9 229 36.7
CAN.G203.54 Capsicum annuum HOM05D004173 ORTHO05D004885 1.6e-24 117.5 171 37.4
SalBow3G3840 Salvia bowleyana HOM05D004173 ORTHO05D004885 1.6e-24 117.5 175 41.1
Lsat_1_v5_gn_8_11461 Lactuca sativa HOM05D004173 ORTHO05D004885 2.1e-24 117.1 171 43.3
Aa31LG11G6110 Aethionema arabicum HOM05D004173 ORTHO05D004885 4.7e-24 115.9 177 39.5
CANSAT25G2618 Cannabis sativa HOM05D004173 ORTHO05D004885 6.2e-24 115.5 179 39.1
Peaxi162Scf00739g00036 Petunia axillaris HOM05D004173 ORTHO05D004885 6.2e-24 115.5 169 39.1
Cfa001210 Carpinus fangiana HOM05D004173 ORTHO05D004885 1.1e-23 114.8 170 41.2
HanXRQChr08g0221561 Helianthus annuus HOM05D004173 ORTHO05D004885 1.4e-23 114.4 166 43.4
Rhsim10G0215400 Rhododendron simsii HOM05D000820 ORTHO05D016785 1.4e-23 114.4 131 50.4
CiPaw.01G306500 Carya illinoinensis HOM05D004173 ORTHO05D004885 4.0e-23 112.8 158 41.8
BcaC06g32235 Brassica carinata HOM05D004173 ORTHO05D004885 1.2e-22 111.3 163 40.5
QL08p064831 Quercus lobata HOM05D004173 ORTHO05D004885 1.5e-22 110.9 168 37.5
Ah.14g087000 Amaranthus hybridus HOM05D004173 ORTHO05D004885 2.0e-22 110.5 211 30.8
Pp3c2_14400 Physcomitrium patens HOM05D004173 ORTHO05D004885 2.6e-22 110.2 169 40.8
Dinv05055 Davidia involucrata HOM05D004173 ORTHO05D004885 7.6e-22 108.6 108 53.7
THA.LOC104826832 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 3.8e-21 106.3 169 39.1
Lj1g0005357 Lotus japonicus HOM05D004173 ORTHO05D004885 4.9e-21 105.9 173 35.8
Peaxi162Scf00167g01213 Petunia axillaris HOM05D004173 ORTHO05D004885 4.9e-21 105.9 157 40.1
SGA_v2.0_scaffold60G20889 Striga asiatica HOM05D004173 ORTHO05D004885 8.4e-21 105.1 167 38.3
Dinv21845 Davidia involucrata HOM05D004173 ORTHO05D004885 1.1e-20 104.8 137 43.1
ClCG11G005670 Citrullus lanatus HOM05D004173 ORTHO05D004885 1.9e-20 104.0 154 40.9
Gohir.A13G006500 Gossypium hirsutum HOM05D004173 ORTHO05D004885 3.2e-20 103.2 182 35.2
ECA238G3313 Erigeron canadensis HOM05D004173 ORTHO05D004885 5.4e-20 102.4 179 38.0
Gorai.013G006900 Gossypium raimondii HOM05D004173 ORTHO05D004885 2.1e-19 100.5 182 34.1
EL10Ac2g02643 Beta vulgaris HOM05D004173 ORTHO05D004885 1.0e-18 98.2 136 44.1
Gohir.D13G006700 Gossypium hirsutum HOM05D004173 ORTHO05D004885 1.0e-18 98.2 182 34.1
Lsat_1_v5_gn_9_60020 Lactuca sativa HOM05D004173 ORTHO05D004885 1.7e-18 97.4 169 37.9
Haze_17356 Corylus avellana HOM05D004173 ORTHO05D004885 3.0e-18 96.7 168 37.5
PGR044G2104 Punica granatum HOM05D004173 ORTHO05D004885 8.7e-18 95.1 166 34.3
Pp3c14_17300 Physcomitrium patens HOM05D004173 ORTHO05D004885 1.5e-17 94.4 163 35.6
Lsat_1_v5_gn_2_126200 Lactuca sativa HOM05D004173 ORTHO05D004885 2.5e-17 93.6 164 37.2
Gohir.A05G403100 Gossypium hirsutum HOM05D004173 ORTHO05D004885 8.1e-16 88.6 128 38.3
unitig_37.g11910 Utricularia gibba HOM05D004173 ORTHO05D004885 8.1e-16 88.6 167 31.1
HanXRQChr09g0252211 Helianthus annuus HOM05D004173 ORTHO05D004885 1.1e-15 88.2 242 32.2
Gohir.D04G012400 Gossypium hirsutum HOM05D004173 ORTHO05D004885 2.4e-15 87.0 129 38.0
Gorai.012G014700 Gossypium raimondii HOM05D004173 ORTHO05D004885 6.9e-15 85.5 129 38.0
CBR_g24287 Chara braunii HOM05D004173 ORTHO05D004885 7.6e-14 82.0 225 26.7
Nitab4.5_0002846g0010 Nicotiana tabacum HOM05D004173 ORTHO05D004885 1.7e-13 80.9 133 32.3
Actinidia07794 Actinidia chinensis HOM05D004173 ORTHO05D004885 1.4e-12 77.8 119 41.2
Pp3c10_16350 Physcomitrium patens HOM05D004173 ORTHO05D004885 7.1e-12 75.5 146 37.0
Mapoly0082s0027 Marchantia polymorpha HOM05D004173 ORTHO05D004885 2.3e-10 70.5 177 31.6
CAN.G546.44 Capsicum annuum HOM05D004173 ORTHO05D004885 1.1e-09 68.2 114 33.3
Nitab4.5_0000375g0240 Nicotiana tabacum HOM05D004173 ORTHO05D004885 2.5e-09 67.0 88 39.8
Phvul.009G044000 Phaseolus vulgaris HOM05D004173 ORTHO05D004885 1.1e-07 61.6 64 50.0
ECA233G6175 Erigeron canadensis HOM05D004173 ORTHO05D004885 2.4e-07 60.5 84 44.0
SEGI_40362 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 4.0e-07 59.7 82 41.5
Lalb_Chr11g0067791 Lupinus albus HOM05D004173 ORTHO05D004885 5.3e-07 59.3 76 39.5


User provided reference genes

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