Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0289 Trochodendron aralioides HOM05D006658 ORTHO05D008515 9.3e-215 750.0 390 100.0
GSVIVG01017866001 Vitis vinifera HOM05D006658 ORTHO05D008515 1.7e-160 569.7 400 75.0
MBI17_g29609_MAGBIO Magnolia biondii HOM05D006658 ORTHO05D008515 8.0e-158 560.8 399 76.4
Haze_00994 Corylus avellana HOM05D006658 ORTHO05D008515 4.0e-157 558.5 391 73.9
Cfa015553 Carpinus fangiana HOM05D006658 ORTHO05D008515 1.2e-156 557.0 394 74.4
CiPaw.02G090200 Carya illinoinensis HOM05D006658 ORTHO05D008515 3.4e-156 555.4 391 73.9
Aqoxy2G03225 Aquilegia oxysepala HOM05D006658 ORTHO05D008515 1.0e-152 543.9 387 73.1
PSO170G4721 Papaver somniferum HOM05D006658 ORTHO05D008515 6.1e-150 534.6 384 74.7
QL06p005937 Quercus lobata HOM05D006658 ORTHO05D008515 8.0e-150 534.3 396 72.0
Nn4g26153 Nelumbo nucifera HOM05D006658 ORTHO05D008515 3.4e-148 528.9 378 73.5
Rhsim02G0017700 Rhododendron simsii HOM05D006658 ORTHO05D008515 3.4e-148 528.9 387 71.3
Dinv38362 Davidia involucrata HOM05D006658 ORTHO05D008515 9.8e-148 527.3 392 71.4
vmacro15292 Vaccinium macrocarpon HOM05D006658 ORTHO05D008515 3.7e-147 525.4 388 70.9
Potri.008G199900 Populus trichocarpa HOM05D006658 ORTHO05D008515 4.9e-147 525.0 391 70.3
MD13G1180000 Malus domestica HOM05D006658 ORTHO05D008515 1.1e-146 523.9 392 71.2
Prupe.1G148500 Prunus persica HOM05D006658 ORTHO05D008515 8.6e-144 514.2 392 70.4
Manes.15G021400 Manihot esculenta HOM05D006658 ORTHO05D008515 2.5e-143 512.7 369 72.1
PSO407G0441 Papaver somniferum HOM05D006658 ORTHO05D008515 2.5e-143 512.7 316 82.9
Sabra08G0161000 Salix brachista HOM05D006658 ORTHO05D008515 9.5e-143 510.8 403 69.0
MELO3C021391.2 Cucumis melo HOM05D006658 ORTHO05D008515 1.2e-142 510.4 391 67.8
ClCG06G005690 Citrullus lanatus HOM05D006658 ORTHO05D008515 3.6e-142 508.8 391 67.3
Atru.chr4.2671 Acer truncatum HOM05D006658 ORTHO05D008515 4.0e-141 505.4 396 69.4
FvH4_4g14170 Fragaria vesca HOM05D006658 ORTHO05D008515 1.3e-139 500.4 390 67.9
Eucgr.E03351 Eucalyptus grandis HOM05D006658 ORTHO05D008515 3.7e-139 498.8 392 66.6
FAN12G0854 Fragaria x ananassa HOM05D006658 ORTHO05D008515 4.9e-139 498.4 390 66.9
Actinidia00076 Actinidia chinensis HOM05D006658 ORTHO05D008515 1.4e-138 496.9 358 72.3
CsaV3_6G005460 Cucumis sativus L. HOM05D006658 ORTHO05D008515 4.1e-138 495.4 345 72.5
Sed0019307 Sechium edule HOM05D006658 ORTHO05D008515 1.6e-137 493.4 345 71.9
Cpa.g.sc16.52 Carica papaya HOM05D006658 ORTHO05D008515 2.7e-137 492.7 391 68.0
CANSAT78G1897 Cannabis sativa HOM05D006658 ORTHO05D008515 6.0e-137 491.5 391 67.3
Ciclev10005116m.g Citrus clementina HOM05D006658 ORTHO05D008515 5.1e-136 488.4 399 66.9
arahy.Tifrunner.gnm1.ann1.V9Y9T8 Arachis hypogaea HOM05D006658 ORTHO05D008515 6.6e-136 488.0 386 68.1
TWI53G0915 Tripterygium wilfordii HOM05D006658 ORTHO05D008515 1.9e-135 486.5 394 67.3
VMungo0540G0090 Vigna mungo HOM05D006658 ORTHO05D008515 4.3e-135 485.3 394 67.5
HanXRQChr12g0359491 Helianthus annuus HOM05D006658 ORTHO05D008515 1.2e-134 483.8 391 66.2
RcHm_v2.0_Chr4g0419051 Rosa chinensis HOM05D006658 ORTHO05D008515 1.2e-134 483.8 383 65.5
Glyma.15G101900 Glycine max HOM05D006658 ORTHO05D008515 4.7e-134 481.9 336 73.2
Medtr2g021220 Medicago truncatula HOM05D006658 ORTHO05D008515 4.7e-134 481.9 363 69.7
Lsat_1_v5_gn_5_165480 Lactuca sativa HOM05D006658 ORTHO05D008515 6.2e-134 481.5 387 68.0
Thecc.04G218900 Theobroma cacao HOM05D006658 ORTHO05D008515 8.1e-134 481.1 397 65.7
arahy.Tifrunner.gnm1.ann1.Q3CYV3 Arachis hypogaea HOM05D006658 ORTHO05D008515 1.1e-133 480.7 358 70.1
Gorai.006G218300 Gossypium raimondii HOM05D006658 ORTHO05D008515 1.1e-133 480.7 363 68.6
Phvul.006G155900 Phaseolus vulgaris HOM05D006658 ORTHO05D008515 1.8e-133 479.9 350 72.6
Lalb_Chr15g0087271 Lupinus albus HOM05D006658 ORTHO05D008515 1.2e-132 477.2 384 66.1
TPR.G28916 Trifolium pratense HOM05D000887 ORTHO05D000908 1.3e-131 473.8 347 71.5
Ca_00605_v3 Cicer arietinum L. HOM05D000887 ORTHO05D000908 1.7e-131 473.4 333 72.4
Sc13g0003830 Simmondsia chinensis HOM05D006658 ORTHO05D008515 6.4e-131 471.5 354 68.1
PGR065G0004 Punica granatum HOM05D006658 ORTHO05D008515 1.1e-130 470.7 384 66.1
Cc03_g02920 Coffea canephora HOM05D006658 ORTHO05D008515 1.4e-130 470.3 389 66.8
FAN07G2752 Fragaria x ananassa HOM05D006658 ORTHO05D008515 5.4e-130 468.4 421 61.5
Lj6g0017983 Lotus japonicus HOM05D006658 ORTHO05D008515 1.6e-129 466.8 323 74.0
Os05g0400600 Oryza sativa ssp. japonica HOM05D006658 ORTHO05D008515 3.5e-129 465.7 331 71.3
Carub.0003s2162 Capsella rubella HOM05D006658 ORTHO05D008515 8.1e-126 454.5 331 71.3
AT3G21580 Arabidopsis thaliana HOM05D006658 ORTHO05D008515 5.2e-125 451.8 331 70.7
BcaB04g19174 Brassica carinata HOM05D006658 ORTHO05D008515 5.2e-125 451.8 385 63.6
CARHR097540 Cardamine hirsuta HOM05D006658 ORTHO05D008515 8.9e-125 451.1 332 71.1
Sp3g19610 Schrenkiella parvula HOM05D006658 ORTHO05D008515 2.6e-124 449.5 333 70.6
DCAR_027140 Daucus carota HOM05D006658 ORTHO05D008515 5.8e-124 448.4 385 63.6
THA.LOC104820222 Tarenaya hassleriana HOM05D006658 ORTHO05D008515 5.8e-124 448.4 384 63.5
AL3G35700 Arabidopsis lyrata HOM05D006658 ORTHO05D008515 7.6e-124 448.0 331 70.7
HPP92_001401 Vanilla planifolia HOM05D006658 ORTHO05D008515 9.9e-124 447.6 306 75.2
Zm00001eb346810 Zea mays HOM05D006658 ORTHO05D008515 1.3e-123 447.2 331 69.2
BcaC01g03498 Brassica carinata HOM05D006658 ORTHO05D008515 1.7e-123 446.8 386 63.0
Thhalv10020897m.g Eutrema salsugineum HOM05D006658 ORTHO05D008515 2.2e-123 446.4 333 70.6
A03p42320 Brassica napus HOM05D006658 ORTHO05D008515 8.4e-123 444.5 387 62.5
BraA03t13384Z Brassica rapa HOM05D006658 ORTHO05D008515 8.4e-123 444.5 387 62.5
ATR0626G018 Amborella trichopoda HOM05D006658 ORTHO05D007095 6.0e-121 438.3 345 68.4
COL.COLO4_21620 Corchorus olitorius HOM05D006658 ORTHO05D008515 1.0e-120 437.6 394 62.4
BolC3t17462H Brassica oleracea HOM05D006658 ORTHO05D008515 1.3e-120 437.2 386 61.9
C03p51780 Brassica napus HOM05D006658 ORTHO05D008515 3.0e-120 436.0 386 61.7
Aa31sc174G10 Aethionema arabicum HOM05D006658 ORTHO05D008515 6.6e-120 434.9 333 67.6
EL10Ac4g08937 Beta vulgaris HOM05D006658 ORTHO05D008515 6.6e-120 434.9 346 68.2
Solyc01g080300.4 Solanum lycopersicum HOM05D006658 ORTHO05D008515 2.1e-118 429.9 391 59.8
Sopen01g032090 Solanum pennellii HOM05D006658 ORTHO05D008515 6.2e-118 428.3 393 59.3
MSTRG.24762 Avicennia marina HOM05D006658 ORTHO05D008515 2.4e-117 426.4 331 65.0
CAN.G522.10 Capsicum annuum HOM05D006658 ORTHO05D008515 5.3e-117 425.2 395 59.5
PGSC0003DMG400004353 Solanum tuberosum HOM05D006658 ORTHO05D008515 1.2e-116 424.1 393 59.0
Migut.N00139 Erythranthe guttata HOM05D006658 ORTHO05D008515 2.2e-115 419.9 319 66.5
Duzib212G0844 Durio zibethinus HOM05D006658 ORTHO05D008515 6.4e-115 418.3 310 70.6
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 6.4e-115 418.3 361 61.8
SalBow5G3198 Salvia bowleyana HOM05D006658 ORTHO05D008515 6.4e-115 418.3 335 64.8
Gohir.A09G200700 Gossypium hirsutum HOM05D006658 ORTHO05D008515 5.4e-114 415.2 399 58.1
Gohir.D09G194900 Gossypium hirsutum HOM05D006658 ORTHO05D008515 9.3e-114 414.5 363 61.4
Nitab4.5_0003070g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008515 1.2e-113 414.1 429 55.5
SGA_v2.0_scaffold107G30765 Striga asiatica HOM05D006658 ORTHO05D008515 3.0e-112 409.5 362 60.2
Psat5g176560 Pisum sativum HOM05D006658 ORTHO05D008515 5.1e-112 408.7 340 64.7
SEGI_40702 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 1.5e-111 407.1 332 61.7
CDE02G1914 Ceratophyllum demersum HOM05D006658 ORTHO05D008515 5.6e-111 405.2 394 59.1
FAN22G2256 Fragaria x ananassa HOM05D006658 ORTHO05D008515 4.8e-110 402.1 256 78.9
PGR004G0022 Punica granatum HOM05D006658 ORTHO05D008515 1.9e-103 380.2 325 63.7
CSS0022396 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 1.6e-102 377.1 251 76.1
AUR62004779 Chenopodium quinoa HOM05D006658 ORTHO05D008515 9.3e-98 361.3 381 54.6
RcHm_v2.0_Chr2g0086241 Rosa chinensis HOM05D006658 ORTHO05D008515 2.1e-97 360.1 336 58.9
Ah.06g191650 Amaranthus hybridus HOM05D006658 ORTHO05D008515 1.9e-95 353.6 333 59.2
ECA234G3592 Erigeron canadensis HOM05D006658 ORTHO05D008515 1.9e-95 353.6 227 78.4
Mapoly0015s0173 Marchantia polymorpha HOM05D006658 ORTHO05D008515 9.6e-95 351.3 329 54.1
Pp3c16_5660 Physcomitrium patens HOM05D006658 ORTHO05D008515 8.2e-94 348.2 306 57.2
Glyma.13G210900 Glycine max HOM05D006658 ORTHO05D008515 3.0e-88 329.7 261 66.3
SMO361G0230 Selaginella moellendorffii HOM05D006658 ORTHO05D008515 7.4e-87 325.1 306 53.9
Lj3A803G20 Lonicera japonica HOM05D006658 ORTHO05D008515 3.7e-86 322.8 319 55.2
unitig_61.g26008 Utricularia gibba HOM05D006658 ORTHO05D008515 3.1e-85 319.7 314 54.1
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 3.2e-82 309.7 318 50.0
RcHm_v2.0_Chr5g0064291 Rosa chinensis HOM05D006658 ORTHO05D008515 3.2e-82 309.7 198 78.3
CDE09G1086 Ceratophyllum demersum HOM05D002356 ORTHO05D002546 3.9e-80 302.8 286 60.1
AUR62003399 Chenopodium quinoa HOM05D006658 ORTHO05D008515 1.7e-78 297.4 271 62.7
Psat1g186040 Pisum sativum HOM05D006658 ORTHO05D008515 7.7e-76 288.5 188 78.2
RcHm_v2.0_Chr5g0045591 Rosa chinensis HOM05D006658 ORTHO05D008515 7.4e-71 271.9 173 79.2
CSS0004357 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 8.2e-70 268.5 228 63.2
Nn1g02127 Nelumbo nucifera HOM05D006658 ORTHO05D008515 2.6e-68 263.5 200 72.5
Hund26050 Selenicereus undatus HOM05D006658 ORTHO05D008515 5.0e-67 259.2 253 58.9
Manes.07G121800 Manihot esculenta HOM05D006658 ORTHO05D008515 3.6e-65 253.1 163 80.4
Cre12.g533950 Chlamydomonas reinhardtii HOM05D006658 ORTHO05D008515 2.2e-54 217.2 303 40.6
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 8.8e-48 195.3 349 43.3
PRCOL_00004089 Prasinoderma coloniale HOM05D006658 ORTHO05D008515 1.4e-45 188.0 267 40.8
SEGI_22040 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 1.6e-44 184.5 137 69.3
MCO01G250 Micromonas commoda HOM05D006658 ORTHO05D008515 1.5e-42 177.9 272 35.7
HPP92_001340 Vanilla planifolia HOM05D006658 ORTHO05D008515 8.6e-35 152.1 105 75.2
Psat2g070960 Pisum sativum HOM05D006658 ORTHO05D008515 1.5e-31 141.4 233 40.8
Peaxi162Scf00095g00724 Petunia axillaris HOM05D006658 ORTHO05D008515 6.4e-30 136.0 205 42.4
Oeu023652.1 Olea europaea HOM05D006658 ORTHO05D008515 4.6e-28 129.8 226 40.7
Actinidia32371 Actinidia chinensis HOM05D006658 ORTHO05D008515 1.6e-25 121.3 82 81.7
Actinidia08452 Actinidia chinensis HOM05D006658 ORTHO05D008515 6.8e-24 115.9 82 76.8
HanXRQChr09g0256171 Helianthus annuus HOM05D006658 ORTHO05D008515 1.3e-14 85.1 62 67.7
Oeu037664.1 Olea europaea HOM05D006658 ORTHO05D008515 3.2e-13 80.5 72 56.9
HanXRQChr04g0123631 Helianthus annuus HOM05D034347 ORTHO05D227534 1.2e-07 62.0 46 69.6
Medtr2g021155 Medicago truncatula HOM05D000007 ORTHO05D000017 6.4e-06 56.2 60 51.7


User provided reference genes

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