Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0228 Trochodendron aralioides HOM05D005134 ORTHO05D006548 8.4e-182 640.2 315 100.0
TAR636G3303 Trochodendron aralioides HOM05D005134 ORTHO05D006548 6.7e-147 524.2 305 83.6
Nn1g02742 Nelumbo nucifera HOM05D005134 ORTHO05D006548 8.0e-132 474.2 315 76.2
Dinv14615 Davidia involucrata HOM05D005134 ORTHO05D006548 8.0e-124 447.6 316 72.2
Manes.09G148800 Manihot esculenta HOM05D005134 ORTHO05D006548 1.3e-118 430.3 314 68.2
Gohir.A13G168200 Gossypium hirsutum HOM05D005134 ORTHO05D006548 9.5e-117 424.1 314 70.4
CiPaw.08G117800 Carya illinoinensis HOM05D005134 ORTHO05D006548 1.4e-115 420.2 314 68.5
Thecc.05G272900 Theobroma cacao HOM05D005134 ORTHO05D006548 1.2e-114 417.2 314 69.4
Gohir.D13G173500 Gossypium hirsutum HOM05D005134 ORTHO05D006548 4.4e-114 415.2 314 68.8
MBI18_g13184_MAGBIO Magnolia biondii HOM05D005134 ORTHO05D006548 3.7e-113 412.1 222 87.4
Aqoxy5G00231 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 4.1e-112 408.7 252 77.4
TWI63G1834 Tripterygium wilfordii HOM05D005134 ORTHO05D006548 2.7e-111 406.0 230 82.6
CSS0005455 Camellia sinensis var. sinensis HOM05D005134 ORTHO05D006548 1.0e-110 404.1 303 67.3
Cpa.g.sc162.33 Carica papaya HOM05D005134 ORTHO05D006548 2.3e-110 402.9 282 71.3
Gorai.013G187000 Gossypium raimondii HOM05D005134 ORTHO05D006548 2.3e-110 402.9 302 69.2
Sc09g0004160 Simmondsia chinensis HOM05D005134 ORTHO05D006548 6.6e-110 401.4 313 66.8
Duzib177G0085 Durio zibethinus HOM05D005134 ORTHO05D006548 8.6e-110 401.0 315 66.3
RcHm_v2.0_Chr3g0449951 Rosa chinensis HOM05D005134 ORTHO05D006548 4.3e-109 398.7 314 65.6
Ciclev10001967m.g Citrus clementina HOM05D005134 ORTHO05D006548 7.3e-109 397.9 314 64.3
Prupe.6G348800 Prunus persica HOM05D005134 ORTHO05D006548 7.3e-109 397.9 308 68.2
GSVIVG01036192001 Vitis vinifera HOM05D005134 ORTHO05D006548 9.5e-109 397.5 314 64.0
CANSAT54G0719 Cannabis sativa HOM05D005134 ORTHO05D006548 3.6e-108 395.6 312 65.7
Potri.019G017900 Populus trichocarpa HOM05D005134 ORTHO05D006548 6.1e-108 394.8 314 67.2
QL03p031652 Quercus lobata HOM05D005134 ORTHO05D006548 1.8e-107 393.3 285 69.1
QL09p031144 Quercus lobata HOM05D005134 ORTHO05D006548 1.8e-107 393.3 285 69.1
CDE02G0996 Ceratophyllum demersum HOM05D005134 ORTHO05D006548 1.2e-106 390.6 316 62.7
VMungo0720G0573 Vigna mungo HOM05D005134 ORTHO05D006548 4.4e-106 388.7 321 62.0
Actinidia04451 Actinidia chinensis HOM05D005134 ORTHO05D006548 9.8e-106 387.5 269 73.6
Rhsim04G0183700 Rhododendron simsii HOM05D005134 ORTHO05D006548 1.3e-105 387.1 251 75.3
Nitab4.5_0011884g0010 Nicotiana tabacum HOM05D005134 ORTHO05D006548 2.2e-105 386.3 254 73.6
MD12G1246100 Malus domestica HOM05D005134 ORTHO05D006548 2.9e-105 386.0 300 66.7
PGR004G2085 Punica granatum HOM05D005134 ORTHO05D006548 3.7e-105 385.6 317 64.0
Phvul.L001688 Phaseolus vulgaris HOM05D005134 ORTHO05D006548 4.1e-104 382.1 320 60.3
Potri.013G045800 Populus trichocarpa HOM05D005134 ORTHO05D006548 4.1e-104 382.1 220 81.4
ATR0730G220 Amborella trichopoda HOM05D005134 ORTHO05D006548 9.2e-104 380.9 259 71.0
THA.LOC104807079 Tarenaya hassleriana HOM05D005134 ORTHO05D006548 9.2e-104 380.9 337 60.5
Hma1.2p1_1006F.1_g247010 Hydrangea macrophylla HOM05D005134 ORTHO05D006548 1.2e-103 380.6 248 75.4
Peaxi162Scf00409g00421 Petunia axillaris HOM05D005134 ORTHO05D006548 1.6e-103 380.2 229 78.6
Nitab4.5_0000044g0220 Nicotiana tabacum HOM05D005134 ORTHO05D006548 3.5e-103 379.0 249 72.7
PSO170G6910 Papaver somniferum HOM05D005134 ORTHO05D006548 7.8e-103 377.9 246 72.8
Sabra13G0042100 Salix brachista HOM05D005134 ORTHO05D006548 1.0e-102 377.5 308 65.9
Lj3A700T11 Lonicera japonica HOM05D005134 ORTHO05D006548 2.3e-102 376.3 248 72.2
MSTRG.21911 Avicennia marina HOM05D005134 ORTHO05D006548 2.5e-101 372.9 250 74.0
GSVIVG01027798001 Vitis vinifera HOM05D005134 ORTHO05D006548 3.3e-101 372.5 207 82.1
MELO3C004420.2 Cucumis melo HOM05D005134 ORTHO05D006548 4.3e-101 372.1 320 64.1
Cc03_g05430 Coffea canephora HOM05D005134 ORTHO05D006548 5.6e-101 371.7 250 73.2
Sopen09g032960 Solanum pennellii HOM05D005134 ORTHO05D006548 5.6e-101 371.7 236 76.7
CAN.G793.56 Capsicum annuum HOM05D005134 ORTHO05D006548 9.5e-101 370.9 236 76.7
FvH4_6g02180 Fragaria vesca HOM05D005134 ORTHO05D006548 1.6e-100 370.2 301 63.8
FAN05G3609 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.6e-100 370.2 301 63.8
Aqoxy2G03635 Aquilegia oxysepala HOM05D005134 ORTHO05D006548 2.1e-100 369.8 294 65.6
PGSC0003DMG400017174 Solanum tuberosum HOM05D005134 ORTHO05D006548 2.8e-100 369.4 245 74.3
Manes.08G138000 Manihot esculenta HOM05D005134 ORTHO05D006548 3.6e-100 369.0 309 63.1
Lj5g0005697 Lotus japonicus HOM05D005134 ORTHO05D006548 1.1e-99 367.5 310 61.0
Oeu028977.1 Olea europaea HOM05D005134 ORTHO05D006548 1.1e-99 367.5 216 78.7
Eucgr.H04250 Eucalyptus grandis HOM05D005134 ORTHO05D006548 1.8e-99 366.7 249 71.5
CsaV3_2G003750 Cucumis sativus L. HOM05D005134 ORTHO05D006548 2.3e-99 366.3 230 75.7
Glyma.10G166800 Glycine max HOM05D005134 ORTHO05D006548 3.1e-99 365.9 311 60.5
Atru.chr6.1561 Acer truncatum HOM05D005134 ORTHO05D006548 4.0e-99 365.5 302 61.9
Eucgr.H04279 Eucalyptus grandis HOM05D005134 ORTHO05D006548 4.0e-99 365.5 249 71.1
FAN14G0587 Fragaria x ananassa HOM05D005134 ORTHO05D006548 5.2e-99 365.2 301 63.1
Medtr1g079925 Medicago truncatula HOM05D005134 ORTHO05D006548 6.8e-99 364.8 291 63.6
Sed0011924 Sechium edule HOM05D005134 ORTHO05D006548 1.2e-98 364.0 317 62.8
ClCG02G016990 Citrullus lanatus HOM05D005134 ORTHO05D006548 3.4e-98 362.5 338 59.8
SalBow3G1367 Salvia bowleyana HOM05D005134 ORTHO05D006548 3.4e-98 362.5 256 68.8
Aa31LG2G12350 Aethionema arabicum HOM05D005134 ORTHO05D006548 4.4e-98 362.1 341 55.1
EL10Ac3g05020 Beta vulgaris HOM05D005134 ORTHO05D006548 1.7e-97 360.1 245 70.6
Sed0016660 Sechium edule HOM05D005134 ORTHO05D006548 1.7e-97 360.1 322 61.8
Migut.N00267 Erythranthe guttata HOM05D005134 ORTHO05D006548 2.2e-97 359.8 253 71.9
FAN05G5817 Fragaria x ananassa HOM05D005134 ORTHO05D006548 2.9e-97 359.4 301 62.5
PSO173G0035 Papaver somniferum HOM05D005134 ORTHO05D006548 3.7e-97 359.0 241 71.0
Actinidia34743 Actinidia chinensis HOM05D005134 ORTHO05D006548 8.3e-97 357.8 353 56.1
CARHR110960 Cardamine hirsuta HOM05D005134 ORTHO05D006548 8.3e-97 357.8 328 56.7
AUR62002121 Chenopodium quinoa HOM05D005134 ORTHO05D006548 8.3e-97 357.8 256 67.6
arahy.Tifrunner.gnm1.ann1.JQR6X4 Arachis hypogaea HOM05D005134 ORTHO05D006548 3.2e-96 355.9 301 61.8
HanXRQChr03g0091791 Helianthus annuus HOM05D005134 ORTHO05D006548 3.2e-96 355.9 226 75.7
Ah.04g155980 Amaranthus hybridus HOM05D005134 ORTHO05D006548 4.1e-96 355.5 246 70.7
COL.COLO4_15462 Corchorus olitorius HOM05D005134 ORTHO05D006548 4.1e-96 355.5 287 64.1
TPR.G32267 Trifolium pratense HOM05D005134 ORTHO05D006548 4.1e-96 355.5 309 59.5
AUR62028240 Chenopodium quinoa HOM05D005134 ORTHO05D006548 5.4e-96 355.1 256 67.6
Zm00001eb210280 Zea mays HOM05D005134 ORTHO05D006548 7.0e-96 354.8 216 78.2
arahy.Tifrunner.gnm1.ann1.MCCA8X Arachis hypogaea HOM05D005134 ORTHO05D006548 9.2e-96 354.4 301 61.5
AL3G53380 Arabidopsis lyrata HOM05D005134 ORTHO05D006548 1.6e-95 353.6 327 56.3
Lalb_Chr02g0149171 Lupinus albus HOM05D005134 ORTHO05D006548 1.6e-95 353.6 291 62.5
Solyc09g090050.4 Solanum lycopersicum HOM05D005134 ORTHO05D006548 2.7e-95 352.8 199 80.9
HPP92_015212 Vanilla planifolia HOM05D005134 ORTHO05D006548 2.7e-95 352.8 213 77.9
Hund03036 Selenicereus undatus HOM05D005134 ORTHO05D006548 4.6e-95 352.1 279 62.7
Glyma.20G222300 Glycine max HOM05D005134 ORTHO05D006548 1.3e-94 350.5 255 66.3
Lsat_1_v5_gn_3_118860 Lactuca sativa HOM05D005134 ORTHO05D006548 2.3e-94 349.7 218 74.3
Carub.0003s3480 Capsella rubella HOM05D005134 ORTHO05D006548 5.0e-94 348.6 346 54.6
Thhalv10027851m.g Eutrema salsugineum HOM05D005134 ORTHO05D006548 6.6e-94 348.2 322 57.1
HPP92_025481 Vanilla planifolia HOM05D005134 ORTHO05D006548 8.6e-94 347.8 228 73.2
SpUn0001_1010 Schrenkiella parvula HOM05D005134 ORTHO05D006548 1.5e-93 347.1 318 57.5
Haze_04438 Corylus avellana HOM05D005134 ORTHO05D006548 2.5e-93 346.3 258 67.8
EL10Ac4g09067 Beta vulgaris HOM05D005134 ORTHO05D006548 4.3e-93 345.5 308 59.4
ECA240G2747 Erigeron canadensis HOM05D005134 ORTHO05D006548 9.5e-93 344.4 229 74.7
unitig_0.g910 Utricularia gibba HOM05D005134 ORTHO05D006548 1.1e-91 340.9 216 74.5
SHI23170 Sapria himalayana HOM05D005134 ORTHO05D006548 1.8e-91 340.1 311 58.8
AT2G20410 Arabidopsis thaliana HOM05D005134 ORTHO05D006548 5.2e-91 338.6 339 53.4
BcaB04g20137 Brassica carinata HOM05D005134 ORTHO05D006548 1.3e-89 334.0 270 63.0
vmacro02444 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 1.3e-89 334.0 319 57.7
FAN02G2775 Fragaria x ananassa HOM05D005134 ORTHO05D006548 2.2e-89 333.2 369 51.2
SEGI_05528 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 2.4e-88 329.7 347 50.4
BcaC09g49624 Brassica carinata HOM05D005134 ORTHO05D006548 5.4e-88 328.6 329 55.3
C01p34370 Brassica napus HOM05D005134 ORTHO05D006548 5.1e-86 322.0 289 58.8
BolC1t03407H Brassica oleracea HOM05D005134 ORTHO05D006548 5.1e-86 322.0 289 58.8
vmacro08495 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 6.2e-84 315.1 415 46.5
Hund06912 Selenicereus undatus HOM05D005134 ORTHO05D006548 8.1e-84 314.7 318 55.3
GSVIVG01027796001 Vitis vinifera HOM05D005134 ORTHO05D006548 3.1e-83 312.8 211 73.0
Rhsim13G0009400 Rhododendron simsii HOM05D005134 ORTHO05D006548 5.8e-82 308.5 315 55.2
Eucgr.H04252 Eucalyptus grandis HOM05D005134 ORTHO05D006548 1.9e-80 303.5 310 56.8
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 2.4e-80 303.1 199 74.9
MD04G1229000 Malus domestica HOM05D005134 ORTHO05D006548 6.0e-79 298.5 332 52.1
Ca_10010_v3 Cicer arietinum L. HOM05D005134 ORTHO05D006548 1.2e-74 284.3 256 58.2
Ah.06g191930 Amaranthus hybridus HOM05D005134 ORTHO05D006548 5.8e-74 282.0 324 50.6
FAN09G4497 Fragaria x ananassa HOM05D005134 ORTHO05D006548 4.2e-72 275.8 247 59.5
AUR62004857 Chenopodium quinoa HOM05D005134 ORTHO05D006548 1.7e-70 270.4 279 54.8
Mapoly0025s0138 Marchantia polymorpha HOM05D005134 ORTHO05D006548 1.7e-70 270.4 297 50.2
Eucgr.H04289 Eucalyptus grandis HOM05D005134 ORTHO05D006548 5.6e-69 265.4 246 57.7
Dinv29871 Davidia involucrata HOM05D005134 ORTHO05D006548 1.6e-63 247.3 194 69.6
HPP92_015224 Vanilla planifolia HOM05D005134 ORTHO05D006548 1.5e-61 240.7 213 59.2
SGA_v2.0_scaffold308G48086 Striga asiatica HOM05D005134 ORTHO05D006548 1.3e-60 237.7 132 78.8
Actinidia01853 Actinidia chinensis HOM05D005134 ORTHO05D006548 1.6e-60 237.3 281 50.2
SMO367G0112 Selaginella moellendorffii HOM05D005134 ORTHO05D006548 6.9e-59 231.9 162 64.8
Eucgr.H04247 Eucalyptus grandis HOM05D005134 ORTHO05D006548 3.8e-57 226.1 127 79.5
AUR62040940 Chenopodium quinoa HOM05D005134 ORTHO05D006548 4.9e-57 225.7 167 63.5
DCAR_002321 Daucus carota HOM05D005134 ORTHO05D006548 6.4e-57 225.3 182 64.8
Actinidia38945 Actinidia chinensis HOM05D005134 ORTHO05D006548 5.1e-54 215.7 316 43.0
Os03g0860000 Oryza sativa ssp. japonica HOM05D005134 ORTHO05D006548 8.7e-54 214.9 123 75.6
Psat6g143200 Pisum sativum HOM05D005134 ORTHO05D006548 1.2e-47 194.5 228 49.1
SEGI_11048 Sequoiadendron giganteum HOM05D005134 ORTHO05D006548 1.8e-43 180.6 282 40.8
AagrBONN_evm.TU.Sc2ySwM_344.1164 Anthoceros agrestis HOM05D005134 ORTHO05D006548 3.4e-42 176.4 129 58.9
Cre16.g655100 Chlamydomonas reinhardtii HOM05D005134 ORTHO05D006548 6.3e-36 155.6 172 44.2
Manes.15G040000 Manihot esculenta HOM05D005134 ORTHO05D006548 7.7e-34 148.7 93 72.0
vmacro02443 Vaccinium macrocarpon HOM05D005134 ORTHO05D006548 7.7e-34 148.7 99 71.7
Eucgr.H04286 Eucalyptus grandis HOM05D005134 ORTHO05D006548 2.8e-28 130.2 133 53.4
Duzib177G1154 Durio zibethinus HOM05D005134 ORTHO05D013855 2.0e-18 97.4 158 43.7
FAN14G5434 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.2e-13 81.6 149 43.0
ATR0598G211 Amborella trichopoda HOM05D005134 ORTHO05D067863 5.3e-11 72.8 82 46.3
RcHm_v2.0_Chr6g0274061 Rosa chinensis HOM05D005134 ORTHO05D006548 6.5e-09 65.9 61 55.7
FAN06G2241 Fragaria x ananassa HOM05D005134 ORTHO05D006548 1.5e-08 64.7 32 84.4
Eucgr.H04277 Eucalyptus grandis HOM05D005134 ORTHO05D194288 6.8e-06 55.8 179 32.4


User provided reference genes

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