Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0204 Trochodendron aralioides HOM05D008157 ORTHO05D009575 7.2e-122 440.7 233 100.0
MBI10_g35435_MAGBIO Magnolia biondii HOM05D008157 ORTHO05D009575 2.3e-43 179.9 211 54.0
Dinv27113 Davidia involucrata HOM05D008157 ORTHO05D009575 4.5e-39 165.6 209 50.7
Nn1g02959 Nelumbo nucifera HOM05D008157 ORTHO05D009575 1.6e-36 157.1 243 42.4
PSO764G0012 Papaver somniferum HOM05D008157 ORTHO05D009575 1.0e-35 154.5 175 52.0
Potri.008G172000 Populus trichocarpa HOM05D008157 ORTHO05D009575 1.4e-32 144.1 180 50.6
Aqoxy5G00149 Aquilegia oxysepala HOM05D000655 ORTHO05D001635 1.3e-30 137.5 139 56.1
Sabra08G0131300 Salix brachista HOM05D008157 ORTHO05D009575 1.7e-30 137.1 223 43.0
Potri.010G065666 Populus trichocarpa HOM05D008157 ORTHO05D009575 4.2e-29 132.5 193 46.6
TAR633G2472 Trochodendron aralioides HOM05D008157 ORTHO05D009575 7.2e-29 131.7 117 60.7
Prupe.1G048400 Prunus persica HOM05D008157 ORTHO05D009575 6.1e-28 128.6 203 42.9
QL06p021011 Quercus lobata HOM05D008157 ORTHO05D009575 3.9e-27 125.9 212 45.8
CSS0033147 Camellia sinensis var. sinensis HOM05D008157 ORTHO05D009575 8.8e-27 124.8 131 52.7
Haze_11459 Corylus avellana HOM05D008157 ORTHO05D009575 2.6e-26 123.2 211 44.1
Manes.03G158800 Manihot esculenta HOM05D008157 ORTHO05D009575 3.3e-26 122.9 205 41.0
Hma1.2p1_0273F.1_g109240 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 4.4e-26 122.5 203 38.4
Sabra10G0041500 Salix brachista HOM05D008157 ORTHO05D009575 8.2e-25 118.2 188 44.1
Duzib138G0893 Durio zibethinus HOM05D014916 ORTHO05D009575 1.1e-24 117.9 210 41.0
TWI09G0993 Tripterygium wilfordii HOM05D008157 ORTHO05D009575 3.1e-24 116.3 200 39.5
CiPaw.02G106900 Carya illinoinensis HOM05D008157 ORTHO05D009575 4.1e-24 115.9 204 44.1
Thecc.04G264100 Theobroma cacao HOM05D008157 ORTHO05D009575 4.1e-24 115.9 200 41.0
Atru.chr4.1914 Acer truncatum HOM05D008157 ORTHO05D009575 6.9e-24 115.2 211 41.2
CANSAT78G1852 Cannabis sativa HOM05D008157 ORTHO05D009575 9.1e-24 114.8 215 39.5
Rhsim02G0043800 Rhododendron simsii HOM05D008157 ORTHO05D009575 9.1e-24 114.8 212 39.6
GSVIVG01028417001 Vitis vinifera HOM05D008157 ORTHO05D009575 3.4e-23 112.8 207 42.5
ClCG05G003990 Citrullus lanatus HOM05D008157 ORTHO05D009575 5.9e-23 112.1 183 45.4
Thecc.01G251000 Theobroma cacao HOM05D014916 ORTHO05D009575 1.0e-22 111.3 152 42.8
Hma1.2p1_1702F.1_g298280 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.3e-22 110.9 174 39.7
Manes.15G045800 Manihot esculenta HOM05D008157 ORTHO05D009575 2.9e-22 109.8 203 42.4
DCAR_030762 Daucus carota HOM05D008157 ORTHO05D009575 3.8e-22 109.4 148 45.3
PSO832G3861 Papaver somniferum HOM05D008157 ORTHO05D009575 5.0e-22 109.0 129 52.7
CiPaw.03G270400 Carya illinoinensis HOM05D014916 ORTHO05D009575 5.5e-21 105.5 205 40.0
Duzib151G0689 Durio zibethinus HOM05D008157 ORTHO05D009575 2.7e-20 103.2 176 39.8
MD16G1226400 Malus domestica HOM05D008157 ORTHO05D009575 3.6e-20 102.8 156 42.9
FvH4_4g04630 Fragaria vesca HOM05D008157 ORTHO05D009575 8.0e-20 101.7 203 40.4
FAN12G3964 Fragaria x ananassa HOM05D008157 ORTHO05D009575 8.0e-20 101.7 205 39.5
Peaxi162Scf00153g01844 Petunia axillaris HOM05D008157 ORTHO05D009575 1.4e-19 100.9 202 38.6
CsaV3_3G011680 Cucumis sativus L. HOM05D008157 ORTHO05D009575 1.1e-18 97.8 182 41.2
QL09p041310 Quercus lobata HOM05D014916 ORTHO05D009575 1.1e-18 97.8 153 40.5
Gohir.A02G043000 Gossypium hirsutum HOM05D008157 ORTHO05D009575 1.5e-18 97.4 199 38.7
Gohir.D02G048700 Gossypium hirsutum HOM05D008157 ORTHO05D009575 2.6e-18 96.7 199 38.7
Cc03_g06320 Coffea canephora HOM05D008157 ORTHO05D009575 5.7e-18 95.5 213 37.1
Cc09_g08530 Coffea canephora HOM05D008157 ORTHO05D009575 7.4e-18 95.1 205 38.0
Sed0015987 Sechium edule HOM05D008157 ORTHO05D009575 1.3e-17 94.4 187 41.7
EL10Ac3g06669 Beta vulgaris HOM05D008157 ORTHO05D009575 2.2e-17 93.6 152 41.4
Hma1.2p1_0112F.1_g054760 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 4.8e-17 92.4 128 46.9
MELO3C006376.2 Cucumis melo HOM05D008157 ORTHO05D009575 8.2e-17 91.7 182 39.6
Hund20495 Selenicereus undatus HOM05D008157 ORTHO05D009575 8.2e-17 91.7 253 30.8
Haze_24700 Corylus avellana HOM05D008157 ORTHO05D009575 3.1e-16 89.7 205 36.1
Lj5g0023776 Lotus japonicus HOM05D012468 ORTHO05D009575 9.1e-16 88.2 211 35.5
Potri.014G192701 Populus trichocarpa HOM05D008157 ORTHO05D009575 3.5e-15 86.3 173 38.2
SalBow2G3016 Salvia bowleyana HOM05D008157 ORTHO05D009575 6.5e-14 82.0 191 36.6
CDE01G0186 Ceratophyllum demersum HOM05D008157 ORTHO05D009575 1.1e-13 81.3 213 33.3
RcHm_v2.0_Chr4g0395401 Rosa chinensis HOM05D008157 ORTHO05D009575 1.9e-13 80.5 126 44.4
Nitab4.5_0007351g0030 Nicotiana tabacum HOM05D008157 ORTHO05D009575 7.2e-13 78.6 119 44.5
Nitab4.5_0000194g0190 Nicotiana tabacum HOM05D008157 ORTHO05D009575 1.2e-12 77.8 149 38.3
PGR004G0105 Punica granatum HOM05D008157 ORTHO05D009575 4.7e-12 75.9 150 37.3
Prupe.8G216000 Prunus persica HOM05D017729 ORTHO05D022643 1.0e-11 74.7 207 32.4
VMungo0720G2187 Vigna mungo HOM05D012468 ORTHO05D009575 1.8e-11 73.9 196 35.7
MSTRG.4173 Avicennia marina HOM05D008157 ORTHO05D009575 2.3e-11 73.6 148 36.5
Manes.12G036500 Manihot esculenta HOM05D014916 ORTHO05D009575 2.3e-11 73.6 150 37.3
VMungo1215G2213 Vigna mungo HOM05D012468 ORTHO05D009575 2.3e-11 73.6 231 33.3
Phvul.011G133515 Phaseolus vulgaris HOM05D012468 ORTHO05D009575 3.0e-11 73.2 200 35.0
COL.COLO4_15964 Corchorus olitorius HOM05D008157 ORTHO05D009575 4.0e-11 72.8 151 35.8
Glyma.20G200000 Glycine max HOM05D012468 ORTHO05D009575 1.2e-10 71.2 200 34.5
SGA_v2.0_scaffold67G22685 Striga asiatica HOM05D008157 ORTHO05D009575 1.5e-10 70.9 154 35.7
FvH4_2g20360 Fragaria vesca HOM05D017729 ORTHO05D022643 2.0e-10 70.5 208 35.6
Nitab4.5_0000194g0130 Nicotiana tabacum HOM05D008157 ORTHO05D009575 9.7e-10 68.2 115 38.3
Aa31LG9G18080 Aethionema arabicum HOM05D012000 ORTHO05D013959 1.3e-09 67.8 164 36.0
GSVIVG01027916001 Vitis vinifera HOM05D008157 ORTHO05D009575 1.3e-09 67.8 161 34.8
Glyma.10G040300 Glycine max HOM05D016547 ORTHO05D009575 4.8e-09 65.9 153 30.7
FAN24G1650 Fragaria x ananassa HOM05D017729 ORTHO05D022643 1.1e-08 64.7 158 38.6
Gohir.A07G152000 Gossypium hirsutum HOM05D014916 ORTHO05D009575 2.4e-08 63.5 217 30.9
VMungo0720G0558 Vigna mungo HOM05D016547 ORTHO05D009575 2.4e-08 63.5 153 29.4
Gohir.D07G158200 Gossypium hirsutum HOM05D014916 ORTHO05D009575 4.1e-08 62.8 155 35.5
RcHm_v2.0_Chr6g0286731 Rosa chinensis HOM05D017729 ORTHO05D022643 1.6e-07 60.8 141 36.2
FAN27G2614 Fragaria x ananassa HOM05D017729 ORTHO05D022643 2.0e-07 60.5 155 36.8
Psat6g131320 Pisum sativum HOM05D012468 ORTHO05D009575 2.0e-07 60.5 266 25.2
Gorai.001G181400 Gossypium raimondii HOM05D014916 ORTHO05D009575 2.7e-07 60.1 214 31.8
Cfa014784 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.5e-07 59.7 85 45.9
Lsat_1_v5_gn_6_66080 Lactuca sativa HOM05D008157 ORTHO05D035152 4.5e-07 59.3 157 36.3
FAN17G2184 Fragaria x ananassa HOM05D008157 ORTHO05D009575 7.7e-07 58.5 121 40.5
arahy.Tifrunner.gnm1.ann1.JW933S Arachis hypogaea HOM05D012468 ORTHO05D009575 2.2e-06 57.0 192 30.2
THA.LOC104808976 Tarenaya hassleriana HOM05D012000 ORTHO05D013959 2.2e-06 57.0 70 44.3
Carub.0007s1951 Capsella rubella HOM05D012000 ORTHO05D013959 3.8e-06 56.2 153 34.0
arahy.Tifrunner.gnm1.ann1.U79AWX Arachis hypogaea HOM05D012468 ORTHO05D009575 8.5e-06 55.1 196 29.1


User provided reference genes

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