Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 9.0e-184 647.1 411 100.0
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 5.9e-111 405.2 392 65.6
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 6.8e-99 365.2 378 63.2
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 2.6e-98 363.2 375 62.4
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 1.3e-97 360.9 382 62.0
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 4.3e-93 345.9 301 65.8
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 5.2e-91 339.0 376 61.2
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 7.1e-88 328.6 287 63.1
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 1.2e-87 327.8 293 62.8
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 1.6e-87 327.4 324 59.9
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 3.0e-86 323.2 300 59.0
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 1.5e-85 320.9 303 61.7
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 3.3e-85 319.7 282 63.1
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 2.8e-84 316.6 291 61.5
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 6.2e-84 315.5 300 59.0
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.5e-82 310.8 283 61.1
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 2.0e-82 310.5 299 60.2
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 4.4e-82 309.3 295 60.0
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 4.4e-82 309.3 199 76.9
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 5.8e-82 308.9 277 61.4
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 2.2e-81 307.0 277 61.0
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 3.7e-81 306.2 298 59.7
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 4.9e-81 305.8 298 59.7
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 8.4e-81 305.1 273 61.2
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 3.2e-80 303.1 279 62.4
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 2.1e-79 300.4 288 59.7
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 7.8e-79 298.5 273 61.2
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 1.0e-78 298.1 267 61.8
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 1.7e-78 297.4 385 50.1
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 1.1e-77 294.7 208 74.0
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 1.5e-77 294.3 294 58.5
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 4.3e-77 292.7 285 61.1
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 9.6e-77 291.6 363 56.7
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 9.6e-77 291.6 267 61.8
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 9.6e-77 291.6 301 59.1
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 1.7e-73 280.8 343 50.4
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 2.2e-73 280.4 300 57.0
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 4.9e-73 279.3 294 53.7
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 6.4e-73 278.9 303 56.1
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 9.3e-72 275.0 299 55.5
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 9.3e-72 275.0 300 55.3
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 9.3e-72 275.0 296 53.7
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 1.2e-71 274.6 302 55.6
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 6.0e-71 272.3 181 76.8
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 7.8e-71 271.9 296 57.8
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 7.8e-71 271.9 282 55.3
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 1.0e-70 271.6 293 59.4
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 1.3e-70 271.2 302 55.3
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 1.5e-69 267.7 292 56.5
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 1.9e-69 267.3 297 53.9
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 5.6e-69 265.8 292 56.2
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 1.3e-68 264.6 296 56.4
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 1.6e-68 264.2 322 54.0
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 3.6e-68 263.1 292 52.7
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 3.6e-68 263.1 304 53.9
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 4.8e-68 262.7 293 52.2
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 1.1e-67 261.5 286 54.5
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 1.1e-67 261.5 297 53.9
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 1.4e-67 261.2 287 57.8
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 1.2e-66 258.1 302 51.3
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 1.5e-66 257.7 303 50.5
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 2.6e-66 256.9 301 54.5
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 2.9e-65 253.4 293 52.9
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 2.9e-65 253.4 293 52.9
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 3.8e-65 253.1 293 52.6
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 4.9e-65 252.7 290 54.5
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 6.4e-65 252.3 305 51.5
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 1.9e-64 250.8 283 55.1
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 1.9e-64 250.8 299 52.8
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 5.4e-64 249.2 277 56.7
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 9.3e-64 248.4 279 52.0
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 9.3e-64 248.4 279 51.6
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 4.6e-63 246.1 295 53.6
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 1.3e-62 244.6 317 48.3
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 3.0e-62 243.4 311 49.8
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 1.5e-61 241.1 196 63.8
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 7.4e-61 238.8 297 50.8
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 2.1e-60 237.3 310 48.4
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 2.8e-60 236.9 282 51.8
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 3.6e-60 236.5 302 51.3
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 3.6e-60 236.5 278 52.2
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 1.1e-59 235.0 281 53.4
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 1.1e-59 235.0 278 52.5
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 1.1e-59 235.0 196 63.3
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 5.3e-59 232.6 285 51.6
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 5.3e-59 232.6 307 48.5
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 1.2e-58 231.5 310 48.4
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 5.8e-58 229.2 343 43.7
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.9e-56 224.2 284 50.4
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 4.2e-56 223.0 223 56.5
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 4.6e-55 219.5 193 61.1
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 3.9e-54 216.5 271 50.2
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 8.7e-54 215.3 311 43.7
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 2.5e-53 213.8 167 67.1
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 2.5e-53 213.8 252 50.4
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 2.5e-53 213.8 270 50.0
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 6.2e-52 209.1 181 61.9
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 9.0e-51 205.3 288 46.5
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.7e-49 201.1 288 44.8
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 7.1e-48 195.7 292 43.5
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 1.6e-47 194.5 199 52.8
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 5.1e-46 189.5 270 44.4
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 5.1e-46 189.5 222 50.0
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 1.9e-45 187.6 270 47.8
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 6.3e-44 182.6 179 54.7
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 1.5e-37 161.4 208 45.7
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 7.4e-37 159.1 210 43.3
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 1.1e-32 145.2 306 36.3
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 1.4e-32 144.8 214 40.2
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 6.1e-31 139.4 159 52.8
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 5.1e-30 136.3 193 43.0
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 2.4e-27 127.5 128 57.8
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 2.2e-17 94.4 77 66.2
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 2.5e-16 90.9 57 77.2
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 1.5e-13 81.6 245 31.0
SGA_v2.0_scaffold935G53736 Striga asiatica HOM05D002428 ORTHO05D008664 1.7e-12 78.2 117 48.7


User provided reference genes

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