Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0182 Trochodendron aralioides HOM05D002769 ORTHO05D003160 2.7e-112 408.7 207 100.0
TAR636G3291 Trochodendron aralioides HOM05D002769 ORTHO05D003160 1.0e-58 230.7 207 63.3
TAR362G0869 Trochodendron aralioides HOM05D002769 ORTHO05D003160 6.1e-56 221.5 208 60.1
TAR633G0965 Trochodendron aralioides HOM05D002769 ORTHO05D003160 3.4e-46 189.1 145 71.0
PSO832G1375 Papaver somniferum HOM05D002769 ORTHO05D003160 1.6e-43 180.3 208 50.0
QL09p043841 Quercus lobata HOM05D002769 ORTHO05D003160 5.0e-42 175.3 208 50.5
Nn1g03080 Nelumbo nucifera HOM05D002769 ORTHO05D003160 6.6e-42 174.9 209 48.8
PSO764G0032 Papaver somniferum HOM05D002769 ORTHO05D003160 6.6e-42 174.9 208 49.0
FvH4_2g19940 Fragaria vesca HOM05D002769 ORTHO05D003160 2.5e-41 172.9 208 48.1
FAN27G3465 Fragaria x ananassa HOM05D002769 ORTHO05D003160 9.5e-41 171.0 208 47.1
Nn3g19851 Nelumbo nucifera HOM05D002769 ORTHO05D003160 9.5e-41 171.0 208 51.0
FAN24G0991 Fragaria x ananassa HOM05D002769 ORTHO05D003160 3.6e-40 169.1 208 47.6
TWI59G1133 Tripterygium wilfordii HOM05D002769 ORTHO05D003160 1.0e-39 167.5 209 48.8
Haze_24739 Corylus avellana HOM05D002769 ORTHO05D003160 2.3e-39 166.4 209 48.3
Dinv19246 Davidia involucrata HOM05D002769 ORTHO05D003160 2.3e-39 166.4 210 50.0
FAN14G0266 Fragaria x ananassa HOM05D002769 ORTHO05D003160 2.3e-39 166.4 208 47.1
FAN15G3258 Fragaria x ananassa HOM05D002769 ORTHO05D003160 2.3e-39 166.4 208 47.1
AUR62008853 Chenopodium quinoa HOM05D002769 ORTHO05D003160 3.0e-39 166.0 208 44.2
Atru.chr5.1923 Acer truncatum HOM05D002769 ORTHO05D003160 4.0e-39 165.6 210 46.7
AUR62025393 Chenopodium quinoa HOM05D002769 ORTHO05D003160 4.0e-39 165.6 208 44.7
RcHm_v2.0_Chr6g0285601 Rosa chinensis HOM05D002769 ORTHO05D003160 6.8e-39 164.9 208 47.6
Duzib138G1260 Durio zibethinus HOM05D002769 ORTHO05D003160 8.9e-39 164.5 211 47.9
Cfa002513 Carpinus fangiana HOM05D002769 ORTHO05D003160 1.2e-38 164.1 209 47.4
Ciclev10018694m.g Citrus clementina HOM05D002769 ORTHO05D003160 1.2e-38 164.1 209 45.9
CSS0005557 Camellia sinensis var. sinensis HOM05D002769 ORTHO05D003160 2.6e-38 162.9 208 50.5
Duzib133G1342 Durio zibethinus HOM05D002769 ORTHO05D003160 5.8e-38 161.8 210 45.2
Thecc.01G245100 Theobroma cacao HOM05D002769 ORTHO05D003160 1.3e-37 160.6 209 45.5
Potri.002G253600 Populus trichocarpa HOM05D002769 ORTHO05D003160 3.7e-37 159.1 199 48.7
Hma1.2p1_0825F.1_g224750 Hydrangea macrophylla HOM05D002769 ORTHO05D003160 6.4e-37 158.3 209 47.8
MD10G1171400 Malus domestica HOM05D002769 ORTHO05D003160 6.4e-37 158.3 206 47.1
Hma1.2p1_1224F.1_g268500 Hydrangea macrophylla HOM05D002769 ORTHO05D003160 1.9e-36 156.8 209 47.4
EL10Ac7g17756 Beta vulgaris HOM05D002769 ORTHO05D003160 3.2e-36 156.0 209 45.5
Sabra02G0192800 Salix brachista HOM05D002769 ORTHO05D003160 3.2e-36 156.0 210 47.1
CiPaw.03G273400 Carya illinoinensis HOM05D002769 ORTHO05D003160 4.1e-36 155.6 208 46.2
Cpa.g.sc8.211 Carica papaya HOM05D002769 ORTHO05D003160 9.2e-36 154.5 147 54.4
Prupe.8G209800 Prunus persica HOM05D002769 ORTHO05D003160 9.2e-36 154.5 212 49.5
CANSAT01G1291 Cannabis sativa HOM05D002769 ORTHO05D003160 1.2e-35 154.1 207 44.4
MD05G1183600 Malus domestica HOM05D002769 ORTHO05D003160 3.5e-35 152.5 210 46.7
Gohir.A07G202500 Gossypium hirsutum HOM05D002769 ORTHO05D003160 6.0e-35 151.8 208 46.2
Manes.12G040100 Manihot esculenta HOM05D002769 ORTHO05D003160 6.0e-35 151.8 199 47.7
Actinidia09495 Actinidia chinensis HOM05D002769 ORTHO05D003160 2.3e-34 149.8 205 46.3
TWI23G0164 Tripterygium wilfordii HOM05D002769 ORTHO05D003160 5.0e-34 148.7 148 56.1
Gorai.001G235600 Gossypium raimondii HOM05D002769 ORTHO05D003160 1.9e-33 146.7 209 44.5
vmacro14776 Vaccinium macrocarpon HOM05D002769 ORTHO05D003160 5.6e-33 145.2 203 46.8
Gohir.D07G208700 Gossypium hirsutum HOM05D002769 ORTHO05D003160 1.2e-32 144.1 205 44.9
Hma1.2p1_1393F.1_g280250 Hydrangea macrophylla HOM05D002769 ORTHO05D003160 1.2e-32 144.1 209 45.0
MBI07_g08924_MAGBIO Magnolia biondii HOM05D002769 ORTHO05D003160 1.6e-32 143.7 203 46.8
Rhsim01G0258600 Rhododendron simsii HOM05D002769 ORTHO05D003160 2.1e-32 143.3 208 45.7
Duzib211G0696 Durio zibethinus HOM05D002769 ORTHO05D003160 4.7e-32 142.1 208 43.3
PGR083G2315 Punica granatum HOM05D002769 ORTHO05D003160 8.0e-32 141.4 210 42.4
COL.COLO4_34722 Corchorus olitorius HOM05D002769 ORTHO05D003160 1.1e-31 141.0 148 53.4
Manes.13G042600 Manihot esculenta HOM05D002769 ORTHO05D003160 1.4e-31 140.6 209 43.1
Cc01_g17490 Coffea canephora HOM05D002769 ORTHO05D003160 2.3e-31 139.8 208 44.2
Gohir.D08G210600 Gossypium hirsutum HOM05D002769 ORTHO05D003160 2.3e-31 139.8 212 41.5
Gorai.004G223300 Gossypium raimondii HOM05D002769 ORTHO05D003160 3.1e-31 139.4 212 41.5
Rhsim13G0041700 Rhododendron simsii HOM05D002769 ORTHO05D003160 4.0e-31 139.0 209 46.4
Ah.15g093430 Amaranthus hybridus HOM05D002769 ORTHO05D003160 6.8e-31 138.3 208 40.9
Lj1g0022994 Lotus japonicus HOM05D002769 ORTHO05D003160 6.8e-31 138.3 208 40.9
vmacro02723 Vaccinium macrocarpon HOM05D002769 ORTHO05D003160 8.9e-31 137.9 209 47.4
Lj2C1137G13 Lonicera japonica HOM05D002769 ORTHO05D003160 1.2e-30 137.5 199 45.2
Gohir.A08G192600 Gossypium hirsutum HOM05D002769 ORTHO05D003160 1.5e-30 137.1 212 40.6
TPR.G7555 Trifolium pratense HOM05D002769 ORTHO05D003160 1.5e-30 137.1 210 41.4
arahy.Tifrunner.gnm1.ann1.CSY4UT Arachis hypogaea HOM05D002769 ORTHO05D003160 2.6e-30 136.3 199 41.7
arahy.Tifrunner.gnm1.ann1.IL7968 Arachis hypogaea HOM05D002769 ORTHO05D003160 2.6e-30 136.3 199 41.7
Aqoxy5G00058 Aquilegia oxysepala HOM05D002769 ORTHO05D003160 3.4e-30 136.0 207 41.1
Glyma.19G170900 Glycine max HOM05D002769 ORTHO05D003160 4.4e-30 135.6 209 40.7
Phvul.001G168100 Phaseolus vulgaris HOM05D002769 ORTHO05D003160 5.8e-30 135.2 209 40.7
TWI14G1051 Tripterygium wilfordii HOM05D002769 ORTHO05D003160 5.8e-30 135.2 140 54.3
Ca_08766_v3 Cicer arietinum L. HOM05D002769 ORTHO05D003160 7.5e-30 134.8 209 41.6
Nitab4.5_0014701g0010 Nicotiana tabacum HOM05D002769 ORTHO05D003160 1.3e-29 134.0 207 41.1
VMungo1383G1619 Vigna mungo HOM05D002769 ORTHO05D003160 1.7e-29 133.7 209 40.2
Nitab4.5_0023523g0010 Nicotiana tabacum HOM05D002769 ORTHO05D003160 6.4e-29 131.7 207 42.5
Glyma.03G169700 Glycine max HOM05D002769 ORTHO05D003160 1.9e-28 130.2 209 41.1
Sed0024831 Sechium edule HOM05D002769 ORTHO05D003160 1.9e-28 130.2 208 39.4
PGSC0003DMG400018957 Solanum tuberosum HOM05D002769 ORTHO05D003160 2.4e-28 129.8 207 41.1
Sc05g0002490 Simmondsia chinensis HOM05D002769 ORTHO05D003160 4.1e-28 129.0 208 41.3
Ah.08g213810 Amaranthus hybridus HOM05D002769 ORTHO05D003160 7.0e-28 128.3 208 39.4
Medtr7g099410 Medicago truncatula HOM05D002769 ORTHO05D003160 1.2e-27 127.5 209 38.8
Peaxi162Scf00052g02120 Petunia axillaris HOM05D002769 ORTHO05D003160 1.2e-27 127.5 207 40.6
PGSC0003DMG400020083 Solanum tuberosum HOM05D002769 ORTHO05D003160 2.1e-27 126.7 207 41.1
Psat3g050280 Pisum sativum HOM05D002769 ORTHO05D003160 6.0e-27 125.2 211 38.4
CiPaw.04G192400 Carya illinoinensis HOM05D002769 ORTHO05D003160 1.3e-26 124.0 208 39.4
Lalb_Chr20g0113371 Lupinus albus HOM05D002769 ORTHO05D003160 1.3e-26 124.0 208 37.0
Eucgr.K03587 Eucalyptus grandis HOM05D002769 ORTHO05D003160 1.7e-26 123.6 209 41.6
ClCG07G001590 Citrullus lanatus HOM05D002769 ORTHO05D003160 2.3e-26 123.2 210 38.6
Solyc06g083660.4 Solanum lycopersicum HOM05D002769 ORTHO05D003160 2.3e-26 123.2 207 40.1
Lalb_Chr01g0019431 Lupinus albus HOM05D002769 ORTHO05D003160 1.5e-25 120.6 208 38.0
Migut.N02243 Erythranthe guttata HOM05D002769 ORTHO05D003160 2.5e-25 119.8 199 40.2
Lj1C80T5 Lonicera japonica HOM05D002769 ORTHO05D003160 2.5e-25 119.8 185 44.3
Sopen06g035050 Solanum pennellii HOM05D002769 ORTHO05D003160 2.5e-25 119.8 207 39.6
MELO3C012813.2 Cucumis melo HOM05D002769 ORTHO05D003160 1.6e-24 117.1 210 39.0
Nitab4.5_0001557g0040 Nicotiana tabacum HOM05D002769 ORTHO05D003160 1.6e-24 117.1 207 40.1
Hund05539 Selenicereus undatus HOM05D002769 ORTHO05D003160 4.7e-24 115.5 208 37.0
GSVIVG01028483001 Vitis vinifera HOM05D002769 ORTHO05D003160 1.1e-23 114.4 208 37.5
SalBow6G0913 Salvia bowleyana HOM05D002769 ORTHO05D003160 6.8e-23 111.7 196 39.3
Eucgr.H00827 Eucalyptus grandis HOM05D002769 ORTHO05D003160 2.6e-22 109.8 207 38.6
Actinidia30106 Actinidia chinensis HOM05D002769 ORTHO05D003160 4.4e-22 109.0 158 45.6
DCAR_018538 Daucus carota HOM05D002769 ORTHO05D003160 5.8e-22 108.6 192 40.6
Peaxi162Scf00517g00316 Petunia axillaris HOM05D002769 ORTHO05D003160 7.5e-22 108.2 207 40.1
Hund18344 Selenicereus undatus HOM05D002769 ORTHO05D003160 7.5e-22 108.2 212 37.3
CsaV3_3G028590 Cucumis sativus L. HOM05D002769 ORTHO05D003160 9.9e-22 107.8 210 39.0
Nitab4.5_0002330g0010 Nicotiana tabacum HOM05D002769 ORTHO05D003160 2.2e-21 106.7 207 39.6
Migut.D00499 Erythranthe guttata HOM05D002769 ORTHO05D003160 6.4e-21 105.1 196 39.3
Oeu015447.1 Olea europaea HOM05D002769 ORTHO05D003160 4.1e-20 102.4 208 36.5
MSTRG.17533 Avicennia marina HOM05D002769 ORTHO05D003160 9.2e-20 101.3 196 37.8
Oeu052101.1 Olea europaea HOM05D002769 ORTHO05D003160 1.7e-18 97.1 208 36.5
ECA247G3589 Erigeron canadensis HOM05D002769 ORTHO05D003160 3.9e-18 95.9 205 37.1
Sed0025022 Sechium edule HOM05D002769 ORTHO05D003160 3.9e-18 95.9 203 37.4
Oeu052102.1 Olea europaea HOM05D002769 ORTHO05D003160 5.1e-18 95.5 208 36.1
MSTRG.18369 Avicennia marina HOM05D002769 ORTHO05D003160 6.6e-18 95.1 199 33.7
PGR044G1424 Punica granatum HOM05D002769 ORTHO05D003160 1.5e-17 94.0 210 34.8
ATR0787G113 Amborella trichopoda HOM05D002769 ORTHO05D003160 1.9e-17 93.6 225 36.0
Lalb_Chr25g0289721 Lupinus albus HOM05D002769 ORTHO05D003160 1.9e-17 93.6 125 44.8
Sp7g26770 Schrenkiella parvula HOM05D002769 ORTHO05D003160 2.5e-17 93.2 210 36.2
DCAR_004699 Daucus carota HOM05D002769 ORTHO05D003160 1.2e-16 90.9 204 35.8
Oeu039642.1 Olea europaea HOM05D002769 ORTHO05D003160 1.2e-16 90.9 122 46.7
Actinidia23736 Actinidia chinensis HOM05D002769 ORTHO05D003160 2.8e-16 89.7 146 44.5
CDE02G0265 Ceratophyllum demersum HOM05D002769 ORTHO05D003160 3.6e-16 89.4 194 37.1
Carub.0007s1188 Capsella rubella HOM05D002769 ORTHO05D003160 1.1e-15 87.8 210 33.8
Lsat_1_v5_gn_8_90361 Lactuca sativa HOM05D002769 ORTHO05D003160 1.4e-15 87.4 203 36.0
HanXRQChr10g0280321 Helianthus annuus HOM05D002769 ORTHO05D003160 2.4e-15 86.7 203 37.4
THA.LOC104826058 Tarenaya hassleriana HOM05D002769 ORTHO05D003160 3.1e-15 86.3 202 31.7
Glyma.13G129700 Glycine max HOM05D002769 ORTHO05D003160 4.0e-15 85.9 107 43.0
HanXRQChr13g0409001 Helianthus annuus HOM05D002769 ORTHO05D003160 4.0e-15 85.9 205 34.1
Sed0013807 Sechium edule HOM05D002769 ORTHO05D003160 4.0e-15 85.9 110 43.6
CDE09G0203 Ceratophyllum demersum HOM05D002769 ORTHO05D003160 5.2e-15 85.5 125 42.4
Sed0000267 Sechium edule HOM05D002769 ORTHO05D003160 5.2e-15 85.5 203 36.9
A01p09150 Brassica napus HOM05D002769 ORTHO05D003160 1.2e-14 84.3 210 34.3
BraA01t00861Z Brassica rapa HOM05D002769 ORTHO05D003160 1.2e-14 84.3 210 34.3
SGA_v2.0_scaffold42G16160 Striga asiatica HOM05D002769 ORTHO05D003160 1.2e-14 84.3 205 30.2
Phvul.007G155800 Phaseolus vulgaris HOM05D002769 ORTHO05D003160 1.5e-14 84.0 112 42.0
ClCG09G009430 Citrullus lanatus HOM05D002769 ORTHO05D003160 2.0e-14 83.6 212 38.7
BolC1t01033H Brassica oleracea HOM05D002769 ORTHO05D003160 3.4e-14 82.8 210 34.3
MELO3C024147.2 Cucumis melo HOM05D002769 ORTHO05D003160 4.4e-14 82.4 215 33.0
THA.LOC104814547 Tarenaya hassleriana HOM05D002769 ORTHO05D003160 4.4e-14 82.4 206 35.4
ECA236G3239 Erigeron canadensis HOM05D002769 ORTHO05D003160 5.8e-14 82.0 197 32.5
C01p10740 Brassica napus HOM05D002769 ORTHO05D003160 1.7e-13 80.5 210 33.8
Glyma.10G042300 Glycine max HOM05D002769 ORTHO05D003160 1.7e-13 80.5 106 40.6
Thhalv10024350m.g Eutrema salsugineum HOM05D002769 ORTHO05D003160 2.2e-13 80.1 210 33.8
VMungo0720G2819 Vigna mungo HOM05D002769 ORTHO05D003160 6.4e-13 78.6 104 37.5
Aa31LG2G21610 Aethionema arabicum HOM05D002769 ORTHO05D003160 8.4e-13 78.2 209 33.5
AT4G28760 Arabidopsis thaliana HOM05D002769 ORTHO05D003160 1.1e-12 77.8 209 32.5
Sopen09g025250 Solanum pennellii HOM05D002769 ORTHO05D003160 1.1e-12 77.8 111 47.7
Actinidia37569 Actinidia chinensis HOM05D002769 ORTHO05D003160 1.9e-12 77.0 205 32.2
ATR0759G019 Amborella trichopoda HOM05D002769 ORTHO05D001913 4.2e-12 75.9 146 39.7
SGA_v2.0_scaffold1G00680 Striga asiatica HOM05D002769 ORTHO05D003160 7.1e-12 75.1 135 38.5
CsaV3_7G025430 Cucumis sativus L. HOM05D002769 ORTHO05D003160 2.7e-11 73.2 203 34.5
Potri.014G194600 Populus trichocarpa HOM05D002769 ORTHO05D003160 7.8e-11 71.6 86 45.3
CARHR236550 Cardamine hirsuta HOM05D002769 ORTHO05D003160 1.3e-10 70.9 211 31.8
THA.LOC104804028 Tarenaya hassleriana HOM05D002769 ORTHO05D003160 1.7e-10 70.5 209 31.1
Dinv35653 Davidia involucrata HOM05D002036 ORTHO05D001913 2.3e-10 70.1 114 47.4
DCAR_012619 Daucus carota HOM05D002769 ORTHO05D003160 8.7e-10 68.2 110 40.9
Medtr1g069190 Medicago truncatula HOM05D002769 ORTHO05D003160 1.1e-09 67.8 100 40.0
BcaNung07247 Brassica carinata HOM05D002769 ORTHO05D003160 3.3e-09 66.2 128 39.1
SGA_v2.0_scaffold3G01594 Striga asiatica HOM05D002769 ORTHO05D003160 3.3e-09 66.2 124 37.1
Lsat_1_v5_gn_9_12080 Lactuca sativa HOM05D002769 ORTHO05D003160 4.3e-09 65.9 205 29.8
Dinv37219 Davidia involucrata HOM05D002036 ORTHO05D001913 5.6e-09 65.5 114 40.4
AL7G23740 Arabidopsis lyrata HOM05D002769 ORTHO05D003160 7.3e-09 65.1 209 32.1
Duzib093G0032 Durio zibethinus HOM05D002036 ORTHO05D001913 1.6e-08 63.9 168 33.9
Atru.chr8.2482 Acer truncatum HOM05D002036 ORTHO05D001913 2.1e-08 63.5 123 38.2
unitig_578.g16432 Utricularia gibba HOM05D002769 ORTHO05D003160 2.8e-08 63.2 133 35.3
DCAR_000547 Daucus carota HOM05D002769 ORTHO05D003160 4.7e-08 62.4 92 42.4
CiPaw.09G187300 Carya illinoinensis HOM05D002036 ORTHO05D001913 6.2e-08 62.0 124 40.3
HanXRQChr15g0468501 Helianthus annuus HOM05D002769 ORTHO05D003160 6.2e-08 62.0 136 38.2
TPR.G25867 Trifolium pratense HOM05D002769 ORTHO05D003160 6.2e-08 62.0 95 40.0
MSTRG.21446 Avicennia marina HOM05D002769 ORTHO05D003160 8.1e-08 61.6 182 29.7
Gohir.D09G154900 Gossypium hirsutum HOM05D002036 ORTHO05D001913 1.1e-07 61.2 119 37.0
Lj5g0017917 Lotus japonicus HOM05D002769 ORTHO05D003160 1.4e-07 60.8 99 38.4
Aqoxy4G03055 Aquilegia oxysepala HOM05D002036 ORTHO05D001913 1.8e-07 60.5 140 33.6
Gohir.A09G159300 Gossypium hirsutum HOM05D002036 ORTHO05D001913 1.8e-07 60.5 119 37.0
Cfa017446 Carpinus fangiana HOM05D002036 ORTHO05D001913 5.3e-07 58.9 120 39.2
Haze_20717 Corylus avellana HOM05D002036 ORTHO05D001913 5.3e-07 58.9 121 38.8
Gorai.006G176300 Gossypium raimondii HOM05D002036 ORTHO05D001913 6.9e-07 58.5 119 36.1
Nn2g12861 Nelumbo nucifera HOM05D002036 ORTHO05D001913 6.9e-07 58.5 129 36.4
HanXRQChr10g0287231 Helianthus annuus HOM05D002769 ORTHO05D003160 1.5e-06 57.4 146 33.6
QL07p046595 Quercus lobata HOM05D002036 ORTHO05D001913 4.4e-06 55.8 136 37.5
Lj2C101T4 Lonicera japonica HOM05D002036 ORTHO05D001913 5.8e-06 55.5 119 36.1
Thecc.05G046700 Theobroma cacao HOM05D002036 ORTHO05D001913 7.6e-06 55.1 123 35.8
vmacro20108 Vaccinium macrocarpon HOM05D002036 ORTHO05D001913 9.9e-06 54.7 125 36.8


User provided reference genes

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