Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0134 Trochodendron aralioides HOM05D008757 ORTHO05D010583 5.0e-208 727.6 393 100.0
Actinidia25837 Actinidia chinensis HOM05D008757 ORTHO05D010583 4.7e-65 252.7 382 42.9
QL12p028983 Quercus lobata HOM05D008757 ORTHO05D010583 6.1e-65 252.3 386 42.2
CSS0028194 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 1.2e-63 248.1 391 43.2
Cfa005830 Carpinus fangiana HOM05D008757 ORTHO05D010583 5.7e-63 245.7 393 41.7
CSS0009821 Camellia sinensis var. sinensis HOM05D008757 ORTHO05D010583 2.2e-62 243.8 374 43.3
Rhsim01G0289500 Rhododendron simsii HOM05D008757 ORTHO05D010583 6.8e-56 222.2 434 37.1
Haze_05014 Corylus avellana HOM05D008757 ORTHO05D010583 4.9e-54 216.1 353 41.4
Sabra02G0159400 Salix brachista HOM05D008757 ORTHO05D010583 2.7e-52 210.3 376 37.2
Gohir.A11G110800 Gossypium hirsutum HOM05D008757 ORTHO05D010583 3.5e-52 209.9 340 36.8
TWI18G1222 Tripterygium wilfordii HOM05D008757 ORTHO05D010583 6.6e-51 205.7 295 43.1
vmacro15123 Vaccinium macrocarpon HOM05D008757 ORTHO05D010583 6.6e-51 205.7 209 51.2
Potri.002G198200 Populus trichocarpa HOM05D008757 ORTHO05D010583 8.6e-51 205.3 371 36.1
Lj1A19T23 Lonicera japonica HOM05D008757 ORTHO05D010583 7.3e-50 202.2 402 36.8
Gohir.D11G115900 Gossypium hirsutum HOM05D008757 ORTHO05D010583 3.6e-49 199.9 340 35.3
Aqoxy3G01114 Aquilegia oxysepala HOM05D008757 ORTHO05D010583 7.5e-47 192.2 350 37.4
COL.COLO4_23259 Corchorus olitorius HOM05D002981 ORTHO05D003725 4.9e-46 189.5 283 39.9
ATR0706G029 Amborella trichopoda HOM05D008757 ORTHO05D010583 9.2e-45 185.3 219 44.7
Hma1.2p1_1302F.1_g274300 Hydrangea macrophylla HOM05D008757 ORTHO05D010583 1.3e-43 181.4 162 52.5
Dinv10074 Davidia involucrata HOM05D008757 ORTHO05D010583 2.3e-43 180.6 392 34.7
DCAR_012364 Daucus carota HOM05D008757 ORTHO05D010583 4.7e-41 172.9 366 31.7
Gorai.007G124100 Gossypium raimondii HOM05D008757 ORTHO05D010583 8.9e-40 168.7 305 34.8
Migut.D00097 Erythranthe guttata HOM05D008757 ORTHO05D010583 6.4e-38 162.5 281 35.2
Nitab4.5_0000906g0100 Nicotiana tabacum HOM05D008757 ORTHO05D010583 6.4e-38 162.5 421 33.0
Nitab4.5_0000116g0030 Nicotiana tabacum HOM05D008757 ORTHO05D010583 1.9e-37 161.0 345 34.8
GSVIVG01028089001 Vitis vinifera HOM05D008757 ORTHO05D010583 5.1e-35 152.9 223 40.4
MSTRG.18114 Avicennia marina HOM05D008757 ORTHO05D010583 7.3e-34 149.1 289 31.5
Sopen01g031410 Solanum pennellii HOM05D008757 ORTHO05D010583 9.6e-34 148.7 403 32.5
FvH4_5g39560 Fragaria vesca HOM05D008757 ORTHO05D010583 1.8e-32 144.4 165 43.6
Solyc01g079630.3 Solanum lycopersicum HOM05D008757 ORTHO05D010583 4.0e-32 143.3 404 31.9
Prupe.8G269900 Prunus persica HOM05D008757 ORTHO05D010583 6.9e-32 142.5 159 42.8
Peaxi162Scf00001g00251 Petunia axillaris HOM05D008757 ORTHO05D010583 2.0e-31 141.0 395 29.9
FAN18G1448 Fragaria x ananassa HOM05D008757 ORTHO05D010583 4.4e-31 139.8 167 41.9
FAN08G1681 Fragaria x ananassa HOM05D008757 ORTHO05D010583 9.9e-31 138.7 167 41.3
FAN13G0940 Fragaria x ananassa HOM05D008757 ORTHO05D010583 8.4e-30 135.6 175 40.0
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 1.1e-29 135.2 209 34.4
FAN04G1474 Fragaria x ananassa HOM05D008757 ORTHO05D010583 2.4e-29 134.0 175 40.0
RcHm_v2.0_Chr7g0241871 Rosa chinensis HOM05D008757 ORTHO05D010583 2.4e-29 134.0 336 30.1
SGA_v2.0_scaffold334G49056 Striga asiatica HOM05D008757 ORTHO05D010583 3.2e-29 133.7 352 28.4
Cc08_g11800 Coffea canephora HOM05D008757 ORTHO05D010583 2.3e-27 127.5 266 35.7
MD11G1316900 Malus domestica HOM05D008757 ORTHO05D010583 2.5e-26 124.0 152 41.4
AT3G62620 Arabidopsis thaliana HOM05D012658 ORTHO05D010583 8.7e-19 99.0 128 39.8
Thecc.01G310700 Theobroma cacao HOM05D008757 ORTHO05D010583 1.5e-18 98.2 104 49.0
Carub.0005s2928 Capsella rubella HOM05D012658 ORTHO05D010583 5.6e-18 96.3 128 39.1
BcaC07g40779 Brassica carinata HOM05D012658 ORTHO05D010583 4.8e-17 93.2 128 38.3
THA.LOC104817467 Tarenaya hassleriana HOM05D012658 ORTHO05D010583 1.1e-16 92.0 129 37.2
CARHR172890 Cardamine hirsuta HOM05D012658 ORTHO05D010583 1.8e-16 91.3 128 38.3
AL5G45370 Arabidopsis lyrata HOM05D012658 ORTHO05D010583 2.4e-16 90.9 140 36.4
BcaC07g40736 Brassica carinata HOM05D012658 ORTHO05D010583 3.1e-16 90.5 128 35.9
SEGI_00673 Sequoiadendron giganteum HOM05D008307 ORTHO05D010374 3.1e-16 90.5 186 29.6
BraA09t40861Z Brassica rapa HOM05D012658 ORTHO05D010583 3.4e-15 87.0 128 35.2
BolC8t51315H Brassica oleracea HOM05D012658 ORTHO05D010583 4.5e-15 86.7 128 35.2
A09p54480 Brassica napus HOM05D012658 ORTHO05D010583 9.9e-15 85.5 128 35.2
Thhalv10006051m.g Eutrema salsugineum HOM05D012658 ORTHO05D010583 9.9e-15 85.5 132 34.8
SMO165G0083 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 2.2e-14 84.3 199 27.1
C08p37370 Brassica napus HOM05D012658 ORTHO05D010583 8.4e-14 82.4 128 34.4
ATR0736G143 Amborella trichopoda HOM05D008307 ORTHO05D010374 4.2e-13 80.1 148 30.4
MBI07_g31095_MAGBIO Magnolia biondii HOM05D008307 ORTHO05D010374 5.5e-13 79.7 148 34.5
AagrBONN_evm.TU.Sc2ySwM_369.432 Anthoceros agrestis HOM05D008307 ORTHO05D010374 7.1e-13 79.3 251 25.1
Pp3c6_16530 Physcomitrium patens HOM05D008307 ORTHO05D010374 9.3e-13 79.0 225 26.7
A05p34600 Brassica napus HOM05D012658 ORTHO05D010583 2.1e-12 77.8 130 33.8
CSS0044876 Camellia sinensis var. sinensis HOM05D008307 ORTHO05D010374 2.1e-12 77.8 148 31.8
TAR365G0480 Trochodendron aralioides HOM05D008307 ORTHO05D010374 2.1e-12 77.8 153 28.8
Pp3c5_17310 Physcomitrium patens HOM05D008307 ORTHO05D010374 4.6e-12 76.6 230 25.2
Aqoxy7G00920 Aquilegia oxysepala HOM05D008307 ORTHO05D010374 3.9e-11 73.6 148 30.4
TWI73G0959 Tripterygium wilfordii HOM05D008307 ORTHO05D010374 1.5e-10 71.6 147 33.3
Haze_11405 Corylus avellana HOM05D008307 ORTHO05D010374 2.5e-10 70.9 145 31.0
QL06p018536 Quercus lobata HOM05D008307 ORTHO05D010374 2.5e-10 70.9 149 32.2
Potri.010G070001 Populus trichocarpa HOM05D008307 ORTHO05D010374 3.3e-10 70.5 148 30.4
PGR119G0138 Punica granatum HOM05D008757 ORTHO05D010583 5.6e-10 69.7 335 26.0
Cfa014722 Carpinus fangiana HOM05D008307 ORTHO05D010374 7.4e-10 69.3 145 30.3
MD16G1220900 Malus domestica HOM05D008307 ORTHO05D010374 9.6e-10 68.9 148 29.7
Actinidia35796 Actinidia chinensis HOM05D008307 ORTHO05D010374 1.3e-09 68.6 148 27.7
CARHR099340 Cardamine hirsuta HOM05D008307 ORTHO05D010374 1.4e-08 65.1 160 27.5
RcHm_v2.0_Chr4g0393941 Rosa chinensis HOM05D008307 ORTHO05D010374 1.4e-08 65.1 154 31.2
Nitab4.5_0000044g0470 Nicotiana tabacum HOM05D008307 ORTHO05D010374 3.1e-08 63.9 145 31.0
Prupe.1G041400 Prunus persica HOM05D008307 ORTHO05D010374 6.9e-08 62.8 131 30.5
PGR031G2080 Punica granatum HOM05D008307 ORTHO05D010374 6.9e-08 62.8 163 27.6
Peaxi162Scf00041g00209 Petunia axillaris HOM05D008307 ORTHO05D010374 9.0e-08 62.4 115 35.7
Dinv29844 Davidia involucrata HOM05D008307 ORTHO05D010374 1.5e-07 61.6 148 28.4
AT3G23370 Arabidopsis thaliana HOM05D008307 ORTHO05D010374 2.6e-07 60.8 142 28.9
THA.LOC104822237 Tarenaya hassleriana HOM05D008307 ORTHO05D010374 7.6e-07 59.3 137 29.2
AL3G38030 Arabidopsis lyrata HOM05D008307 ORTHO05D010374 1.0e-06 58.9 142 29.6
Thhalv10020149m.g Eutrema salsugineum HOM05D008307 ORTHO05D010374 1.0e-06 58.9 146 28.8
FvH4_4g03920 Fragaria vesca HOM05D008307 ORTHO05D010374 1.0e-06 58.9 154 29.2
vmacro08510 Vaccinium macrocarpon HOM05D008307 ORTHO05D010374 1.3e-06 58.5 105 33.3
FAN17G2370 Fragaria x ananassa HOM05D000478 ORTHO05D010374 1.7e-06 58.2 154 27.9
Carub.0003s2363 Capsella rubella HOM05D008307 ORTHO05D010374 2.2e-06 57.8 128 30.5
Solyc09g090290.3 Solanum lycopersicum HOM05D008307 ORTHO05D010374 3.8e-06 57.0 141 27.0
FAN22G1022 Fragaria x ananassa HOM05D000478 ORTHO05D010374 6.5e-06 56.2 154 27.3
Rhsim04G0177000 Rhododendron simsii HOM05D008307 ORTHO05D010374 6.5e-06 56.2 148 27.0
PGSC0003DMG400017215 Solanum tuberosum HOM05D008307 ORTHO05D010374 6.5e-06 56.2 141 27.0
Nitab4.5_0007280g0010 Nicotiana tabacum HOM05D008307 ORTHO05D010374 8.4e-06 55.8 102 34.3
SGA_v2.0_scaffold31G12662 Striga asiatica HOM05D008307 ORTHO05D010374 8.4e-06 55.8 130 30.8


User provided reference genes

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