Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0108 Trochodendron aralioides HOM05D006821 ORTHO05D008740 6.1e-67 257.3 126 100.0
TAR633G1083 Trochodendron aralioides HOM05D006821 ORTHO05D008740 4.6e-22 108.2 143 50.3
Actinidia18357 Actinidia chinensis HOM05D006821 ORTHO05D008740 9.6e-20 100.5 142 46.5
TAR362G0286 Trochodendron aralioides HOM05D006821 ORTHO05D008740 9.6e-20 100.5 143 49.7
Hma1.2p1_0195F.1_g084560 Hydrangea macrophylla HOM05D006821 ORTHO05D008740 2.6e-17 92.4 149 45.0
MBI11_g26138_MAGBIO Magnolia biondii HOM05D006821 ORTHO05D008740 4.4e-17 91.7 136 44.1
MD12G1240800 Malus domestica HOM05D006821 ORTHO05D008740 4.4e-17 91.7 142 43.7
Prupe.6G342700 Prunus persica HOM05D006821 ORTHO05D008740 1.7e-16 89.7 142 42.3
CSS0006427 Camellia sinensis var. sinensis HOM05D006821 ORTHO05D008740 2.2e-16 89.4 142 43.7
Sabra05G0046500 Salix brachista HOM05D006821 ORTHO05D008740 2.2e-16 89.4 141 41.1
Aqoxy2G03492 Aquilegia oxysepala HOM05D006821 ORTHO05D008740 3.8e-16 88.6 141 42.6
Dinv10030 Davidia involucrata HOM05D006821 ORTHO05D008740 1.1e-15 87.0 128 46.9
Gohir.D13G107900 Gossypium hirsutum HOM05D006821 ORTHO05D008740 4.2e-15 85.1 146 39.7
Gorai.013G120900 Gossypium raimondii HOM05D006821 ORTHO05D008740 4.2e-15 85.1 146 39.7
Gohir.A13G104500 Gossypium hirsutum HOM05D006821 ORTHO05D008740 1.2e-14 83.6 146 39.0
MD04G1224000 Malus domestica HOM05D006821 ORTHO05D008740 1.6e-14 83.2 142 40.8
Nn1g02511 Nelumbo nucifera HOM05D006821 ORTHO05D008740 1.6e-14 83.2 141 39.0
Solyc01g097350.4 Solanum lycopersicum HOM05D006821 ORTHO05D008740 1.6e-14 83.2 143 42.0
Duzib128G0425 Durio zibethinus HOM05D006821 ORTHO05D008740 2.1e-14 82.8 145 40.7
Duzib177G0830 Durio zibethinus HOM05D006821 ORTHO05D008740 2.7e-14 82.4 141 39.7
Nitab4.5_0012228g0010 Nicotiana tabacum HOM05D006821 ORTHO05D008740 2.7e-14 82.4 143 42.0
Sopen01g041020 Solanum pennellii HOM05D006821 ORTHO05D008740 2.7e-14 82.4 143 42.0
CAN.G134.100 Capsicum annuum HOM05D006821 ORTHO05D008740 4.6e-14 81.6 143 40.6
QL03p025768 Quercus lobata HOM05D006821 ORTHO05D008740 4.6e-14 81.6 132 42.4
Potri.005G052900 Populus trichocarpa HOM05D006821 ORTHO05D008740 7.9e-14 80.9 139 39.6
CiPaw.07G067000 Carya illinoinensis HOM05D006821 ORTHO05D008740 1.0e-13 80.5 142 40.1
Lj7A490T61 Lonicera japonica HOM05D006821 ORTHO05D008740 1.0e-13 80.5 144 39.6
Cc02_g30600 Coffea canephora HOM05D006821 ORTHO05D008740 1.3e-13 80.1 143 39.2
Potri.013G040500 Populus trichocarpa HOM05D006821 ORTHO05D008740 1.7e-13 79.7 144 38.9
Nitab4.5_0001592g0080 Nicotiana tabacum HOM05D006821 ORTHO05D008740 2.3e-13 79.3 160 38.8
Thecc.05G283900 Theobroma cacao HOM05D006821 ORTHO05D008740 2.3e-13 79.3 141 39.0
Ciclev10001807m.g Citrus clementina HOM05D006821 ORTHO05D008740 3.0e-13 79.0 138 42.8
Oeu038441.1 Olea europaea HOM05D006821 ORTHO05D008740 8.7e-13 77.4 144 38.2
Sed0012709 Sechium edule HOM05D006821 ORTHO05D008740 8.7e-13 77.4 140 39.3
GSVIVG01021794001 Vitis vinifera HOM05D006821 ORTHO05D008740 8.7e-13 77.4 143 39.2
COL.COLO4_15343 Corchorus olitorius HOM05D006821 ORTHO05D008740 1.1e-12 77.0 140 38.6
CsaV3_2G004180 Cucumis sativus L. HOM05D006821 ORTHO05D008740 1.5e-12 76.6 142 38.7
AUR62001014 Chenopodium quinoa HOM05D006821 ORTHO05D008740 3.3e-12 75.5 136 38.2
AUR62004944 Chenopodium quinoa HOM05D006821 ORTHO05D008740 9.6e-12 73.9 136 38.2
TWI56G0757 Tripterygium wilfordii HOM05D006821 ORTHO05D008740 9.6e-12 73.9 141 37.6
Thhalv10004570m.g Eutrema salsugineum HOM05D006821 ORTHO05D008740 1.3e-11 73.6 142 36.6
DCAR_029732 Daucus carota HOM05D006821 ORTHO05D008740 1.6e-11 73.2 140 40.0
Atru.chr2.810 Acer truncatum HOM05D006821 ORTHO05D008740 2.1e-11 72.8 136 39.0
SalBow4G1195 Salvia bowleyana HOM05D006821 ORTHO05D008740 2.1e-11 72.8 135 38.5
SalBow4G2420 Salvia bowleyana HOM05D006821 ORTHO05D008740 2.1e-11 72.8 135 38.5
Hund22116 Selenicereus undatus HOM05D006821 ORTHO05D008740 2.1e-11 72.8 138 41.3
Peaxi162Scf00282g00328 Petunia axillaris HOM05D006821 ORTHO05D008740 2.8e-11 72.4 144 36.1
EL10Ac4g09134 Beta vulgaris HOM05D006821 ORTHO05D008740 6.2e-11 71.2 125 39.2
PSO461G0046 Papaver somniferum HOM05D006821 ORTHO05D008740 1.1e-10 70.5 138 34.8
Carub.0006s2610 Capsella rubella HOM05D006821 ORTHO05D008740 1.8e-10 69.7 142 35.2
PSO210G3560 Papaver somniferum HOM05D006821 ORTHO05D008740 5.3e-10 68.2 128 35.9
PSO210G3711 Papaver somniferum HOM05D006821 ORTHO05D008740 5.3e-10 68.2 128 35.9
PSO210G3856 Papaver somniferum HOM05D006821 ORTHO05D008740 5.3e-10 68.2 128 35.9
CARHR185340 Cardamine hirsuta HOM05D006821 ORTHO05D008740 6.9e-10 67.8 142 34.5
PGR004G1103 Punica granatum HOM05D006821 ORTHO05D008740 9.0e-10 67.4 134 38.1
arahy.Tifrunner.gnm1.ann1.7SV4PL Arachis hypogaea HOM05D006821 ORTHO05D008740 1.5e-09 66.6 136 35.3
BraA09t36137Z Brassica rapa HOM05D006821 ORTHO05D008740 2.0e-09 66.2 142 32.4
HPP92_024348 Vanilla planifolia HOM05D006821 ORTHO05D008740 2.0e-09 66.2 139 36.0
BcaC04g23721 Brassica carinata HOM05D006821 ORTHO05D008740 5.8e-09 64.7 142 32.4
C09p05380 Brassica napus HOM05D006821 ORTHO05D008740 5.8e-09 64.7 142 32.4
BolC9t53466H Brassica oleracea HOM05D006821 ORTHO05D008740 5.8e-09 64.7 142 32.4
BcaB04g19632 Brassica carinata HOM05D006821 ORTHO05D008740 7.6e-09 64.3 142 32.4
A09p04980 Brassica napus HOM05D006821 ORTHO05D008740 7.6e-09 64.3 142 32.4
CDE04G3363 Ceratophyllum demersum HOM05D006821 ORTHO05D008740 9.9e-09 63.9 137 33.6
Dinv04728 Davidia involucrata HOM05D006821 ORTHO05D008740 2.9e-08 62.4 34 85.3
Eucgr.H04340 Eucalyptus grandis HOM05D006821 ORTHO05D008740 3.8e-08 62.0 138 33.3
FAN02G2705 Fragaria x ananassa HOM05D006821 ORTHO05D008740 1.4e-07 60.1 50 64.0
FAN05G4221 Fragaria x ananassa HOM05D006821 ORTHO05D008740 1.4e-07 60.1 50 64.0
FAN09G4578 Fragaria x ananassa HOM05D006821 ORTHO05D008740 1.4e-07 60.1 50 64.0
Medtr7g115070 Medicago truncatula HOM05D006821 ORTHO05D008740 1.4e-07 60.1 134 35.1
RcHm_v2.0_Chr3g0451171 Rosa chinensis HOM05D006821 ORTHO05D008740 1.9e-07 59.7 50 64.0
FvH4_6g02990 Fragaria vesca HOM05D006821 ORTHO05D008740 2.4e-07 59.3 50 62.0
FAN14G2672 Fragaria x ananassa HOM05D006821 ORTHO05D008740 2.4e-07 59.3 50 62.0
Psat2g125040 Pisum sativum HOM05D006821 ORTHO05D008740 2.4e-07 59.3 134 35.1
ATR0606G003 Amborella trichopoda HOM05D006821 ORTHO05D008740 4.2e-07 58.5 131 32.1
CDE07G0065 Ceratophyllum demersum HOM05D006821 ORTHO05D008740 5.5e-07 58.2 137 31.4
Manes.08G134300 Manihot esculenta HOM05D006821 ORTHO05D008740 7.1e-07 57.8 34 79.4
Manes.09G153500 Manihot esculenta HOM05D006821 ORTHO05D008740 7.1e-07 57.8 34 76.5
Cfa006429 Carpinus fangiana HOM05D006821 ORTHO05D008740 9.3e-07 57.4 34 76.5
Haze_04355 Corylus avellana HOM05D006821 ORTHO05D008740 9.3e-07 57.4 34 76.5
Sc20g0000300 Simmondsia chinensis HOM05D006821 ORTHO05D008740 9.3e-07 57.4 34 76.5
FAN05G1836 Fragaria x ananassa HOM05D006821 ORTHO05D008740 1.2e-06 57.0 50 62.0
PGSC0003DMG400019432 Solanum tuberosum HOM05D006821 ORTHO05D008740 1.2e-06 57.0 34 76.5
Glyma.03G246900 Glycine max HOM05D006821 ORTHO05D008740 1.6e-06 56.6 34 79.4
Glyma.19G244500 Glycine max HOM05D006821 ORTHO05D008740 1.6e-06 56.6 34 79.4
VMungo0540G1649 Vigna mungo HOM05D006821 ORTHO05D008740 2.1e-06 56.2 138 34.1
SEGI_00561 Sequoiadendron giganteum HOM05D006821 ORTHO05D008740 3.5e-06 55.5 127 33.9
AL6G40810 Arabidopsis lyrata HOM05D006821 ORTHO05D008740 7.9e-06 54.3 34 73.5
AT5G28830 Arabidopsis thaliana HOM05D006821 ORTHO05D008740 7.9e-06 54.3 34 73.5
Ca_09420_v3 Cicer arietinum L. HOM05D006821 ORTHO05D008740 7.9e-06 54.3 34 76.5
TPR.G6944 Trifolium pratense HOM05D006821 ORTHO05D008740 7.9e-06 54.3 34 73.5


User provided reference genes

Program Settings