Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0091 Trochodendron aralioides HOM05D005470 ORTHO05D006855 3.2e-181 638.3 320 100.0
TAR365G1033 Trochodendron aralioides HOM05D005470 ORTHO05D006855 4.6e-127 458.4 230 98.3
Nn3g19926 Nelumbo nucifera HOM05D005470 ORTHO05D006855 9.6e-101 370.9 244 75.0
Aqoxy2G03764 Aquilegia oxysepala HOM05D005470 ORTHO05D006855 2.8e-100 369.4 229 79.0
Haze_24781 Corylus avellana HOM05D005470 ORTHO05D006855 2.8e-100 369.4 237 75.1
QL03p049466 Quercus lobata HOM05D005470 ORTHO05D006855 1.4e-99 367.1 230 78.3
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 1.4e-99 367.1 230 77.8
CiPaw.04G106400 Carya illinoinensis HOM05D005470 ORTHO05D006855 1.8e-99 366.7 230 76.5
Prupe.8G204600 Prunus persica HOM05D005470 ORTHO05D006855 2.6e-98 362.8 234 74.8
FvH4_2g19300 Fragaria vesca HOM05D005470 ORTHO05D006855 3.4e-98 362.5 230 74.3
FAN24G1307 Fragaria x ananassa HOM05D005470 ORTHO05D006855 4.5e-98 362.1 230 73.9
Hma1.2p1_1061F.1_g253380 Hydrangea macrophylla HOM05D005470 ORTHO05D006855 5.9e-98 361.7 234 74.8
Potri.002G240800 Populus trichocarpa HOM05D005470 ORTHO05D006855 2.9e-97 359.4 231 75.3
MD10G1166100 Malus domestica HOM05D005470 ORTHO05D006855 5.0e-97 358.6 232 73.7
RcHm_v2.0_Chr6g0285101 Rosa chinensis HOM05D005470 ORTHO05D006855 5.0e-97 358.6 230 73.9
Nitab4.5_0000866g0040 Nicotiana tabacum HOM05D005470 ORTHO05D006855 6.5e-97 358.2 235 74.0
CSS0013378 Camellia sinensis var. sinensis HOM05D005470 ORTHO05D006855 1.1e-96 357.5 234 73.9
CANSAT56G1556 Cannabis sativa HOM05D005470 ORTHO05D006855 1.1e-96 357.5 233 74.7
Cc01_g17220 Coffea canephora HOM05D005470 ORTHO05D006855 4.2e-96 355.5 235 74.5
Duzib211G0062 Durio zibethinus HOM05D005470 ORTHO05D006855 4.2e-96 355.5 232 74.1
Manes.12G042650 Manihot esculenta HOM05D005470 ORTHO05D006855 4.2e-96 355.5 233 74.2
Nitab4.5_0000866g0080 Nicotiana tabacum HOM05D005470 ORTHO05D006855 9.3e-96 354.4 230 74.3
Nitab4.5_0003790g0040 Nicotiana tabacum HOM05D005470 ORTHO05D006855 9.3e-96 354.4 230 73.9
Sabra02G0183400 Salix brachista HOM05D005470 ORTHO05D006855 2.7e-95 352.8 237 73.4
Dinv04663 Davidia involucrata HOM05D005470 ORTHO05D006855 4.6e-95 352.1 216 76.9
Lalb_Chr19g0125551 Lupinus albus HOM05D005470 ORTHO05D006855 4.6e-95 352.1 227 73.6
Lj2A1133T34 Lonicera japonica HOM05D005470 ORTHO05D006855 6.1e-95 351.7 230 74.3
arahy.Tifrunner.gnm1.ann1.07T9WF Arachis hypogaea HOM05D005470 ORTHO05D006855 1.8e-94 350.1 249 67.5
Lsat_1_v5_gn_8_90101 Lactuca sativa HOM05D005470 ORTHO05D006855 2.3e-94 349.7 233 73.0
PGSC0003DMG400002375 Solanum tuberosum HOM05D005470 ORTHO05D006855 3.0e-94 349.4 227 74.0
Solyc09g061680.3 Solanum lycopersicum HOM05D005470 ORTHO05D006855 3.9e-94 349.0 227 74.9
arahy.Tifrunner.gnm1.ann1.KE0QUS Arachis hypogaea HOM05D005470 ORTHO05D006855 6.7e-94 348.2 230 70.9
Sopen09g024670 Solanum pennellii HOM05D005470 ORTHO05D006855 8.7e-94 347.8 227 74.9
vmacro02749 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 8.7e-94 347.8 236 73.3
Atru.chr5.1498 Acer truncatum HOM05D005470 ORTHO05D006855 1.1e-93 347.4 227 74.0
Thecc.01G227800 Theobroma cacao HOM05D005470 ORTHO05D006855 1.1e-93 347.4 232 72.0
EL10Ac7g17787 Beta vulgaris HOM05D005470 ORTHO05D006855 2.5e-93 346.3 227 72.2
AUR62031834 Chenopodium quinoa HOM05D005470 ORTHO05D006855 2.5e-93 346.3 230 71.7
Hma1.2p1_1061F.1_g253390 Hydrangea macrophylla HOM05D005470 ORTHO05D006855 4.3e-93 345.5 225 74.7
arahy.Tifrunner.gnm1.ann1.4GE7F8 Arachis hypogaea HOM05D005470 ORTHO05D006855 5.7e-93 345.1 230 70.4
MSTRG.21429 Avicennia marina HOM05D005470 ORTHO05D006855 9.7e-93 344.4 232 70.7
Cpa.g.sc8.172 Carica papaya HOM05D005470 ORTHO05D006855 9.7e-93 344.4 231 71.4
ClCG07G001860 Citrullus lanatus HOM05D005470 ORTHO05D006855 9.7e-93 344.4 230 72.2
PSO478G2025 Papaver somniferum HOM05D005470 ORTHO05D006855 1.3e-92 344.0 235 73.2
DCAR_018553 Daucus carota HOM05D005470 ORTHO05D006855 2.2e-92 343.2 216 75.9
PGR083G1301 Punica granatum HOM05D005470 ORTHO05D006855 4.8e-92 342.0 227 70.9
Gohir.D07G162300 Gossypium hirsutum HOM05D005470 ORTHO05D006855 6.3e-92 341.7 236 70.8
Gorai.001G185900 Gossypium raimondii HOM05D005470 ORTHO05D006855 6.3e-92 341.7 236 70.8
PSO017G3643 Papaver somniferum HOM05D005470 ORTHO05D006855 1.4e-91 340.5 233 73.8
TWI75G1873 Tripterygium wilfordii HOM05D005470 ORTHO05D006855 1.4e-91 340.5 230 69.1
Ca_07533_v3 Cicer arietinum L. HOM05D005470 ORTHO05D006855 4.1e-91 339.0 231 73.2
HanXRQChr04g0110691 Helianthus annuus HOM05D005470 ORTHO05D006855 5.3e-91 338.6 230 71.7
Psat3g144240 Pisum sativum HOM05D005470 ORTHO05D006855 5.3e-91 338.6 230 70.4
Gohir.A07G156000 Gossypium hirsutum HOM05D005470 ORTHO05D006855 6.9e-91 338.2 236 70.3
Cfa002558 Carpinus fangiana HOM05D005470 ORTHO05D006855 2.0e-90 336.7 213 77.0
Hund18358 Selenicereus undatus HOM05D005470 ORTHO05D006855 2.0e-90 336.7 231 71.4
Lj1g0018515 Lotus japonicus HOM05D005470 ORTHO05D006855 3.4e-90 335.9 226 70.8
TPR.G15281 Trifolium pratense HOM05D005470 ORTHO05D006855 3.4e-90 335.9 230 71.3
THA.LOC104802678 Tarenaya hassleriana HOM05D005470 ORTHO05D006855 4.5e-90 335.5 233 68.7
Medtr7g058920 Medicago truncatula HOM05D005470 ORTHO05D006855 5.9e-90 335.1 231 71.0
Oeu015466.1 Olea europaea HOM05D005470 ORTHO05D006855 2.2e-89 333.2 227 71.8
GSVIVG01028578001 Vitis vinifera HOM05D005470 ORTHO05D006855 2.2e-89 333.2 231 72.3
MELO3C026704.2 Cucumis melo HOM05D005470 ORTHO05D006855 6.5e-89 331.6 235 68.1
Migut.D00523 Erythranthe guttata HOM05D005470 ORTHO05D006855 1.4e-88 330.5 252 66.7
Migut.I00044 Erythranthe guttata HOM05D005470 ORTHO05D006855 1.4e-88 330.5 232 70.3
Actinidia37584 Actinidia chinensis HOM05D005470 ORTHO05D006855 1.9e-88 330.1 233 68.7
CsaV3_3G028840 Cucumis sativus L. HOM05D005470 ORTHO05D006855 2.5e-88 329.7 228 70.6
Sc17g0002580 Simmondsia chinensis HOM05D005470 ORTHO05D006855 2.5e-88 329.7 230 70.9
CAN.G1273.33 Capsicum annuum HOM05D005470 ORTHO05D006855 3.2e-88 329.3 229 70.7
Phvul.007G209400 Phaseolus vulgaris HOM05D005470 ORTHO05D006855 3.2e-88 329.3 227 69.2
SGA_v2.0_scaffold8G04652 Striga asiatica HOM05D005470 ORTHO05D006855 3.2e-88 329.3 269 64.3
AT5G48840 Arabidopsis thaliana HOM05D005470 ORTHO05D006855 4.2e-88 328.9 226 69.9
Eucgr.H00804 Eucalyptus grandis HOM05D005470 ORTHO05D006855 4.2e-88 328.9 227 68.7
AL8G22020 Arabidopsis lyrata HOM05D005470 ORTHO05D006855 2.1e-87 326.6 226 69.5
Sed0016487 Sechium edule HOM05D005470 ORTHO05D006855 2.7e-87 326.2 231 69.7
VMungo0516G0001 Vigna mungo HOM05D005470 ORTHO05D006855 2.7e-87 326.2 232 67.7
BraA06t26801Z Brassica rapa HOM05D005470 ORTHO05D006855 6.1e-87 325.1 232 68.5
Glyma.18G172500 Glycine max HOM05D005470 ORTHO05D006855 6.1e-87 325.1 225 69.8
Aa31sc866G40 Aethionema arabicum HOM05D005470 ORTHO05D006855 1.4e-86 323.9 230 68.3
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 1.4e-86 323.9 229 69.0
Ciclev10021316m.g Citrus clementina HOM05D005470 ORTHO05D006855 1.8e-86 323.6 220 71.4
CDE01G0096 Ceratophyllum demersum HOM05D005470 ORTHO05D006855 6.7e-86 321.6 252 66.3
BcaC06g30729 Brassica carinata HOM05D005470 ORTHO05D006855 1.1e-85 320.9 233 67.4
Ah.08g214020 Amaranthus hybridus HOM05D005470 ORTHO05D006855 2.0e-85 320.1 257 62.6
BolC7t44465H Brassica oleracea HOM05D005470 ORTHO05D006855 1.3e-84 317.4 232 65.9
Carub.0008s0857 Capsella rubella HOM05D005470 ORTHO05D006855 1.7e-84 317.0 227 67.0
BcaC06g30753 Brassica carinata HOM05D005470 ORTHO05D006855 2.2e-84 316.6 232 65.5
Nn1g07785 Nelumbo nucifera HOM05D005470 ORTHO05D006855 2.2e-84 316.6 197 76.6
C07p39460 Brassica napus HOM05D005470 ORTHO05D006855 4.8e-84 315.5 232 65.5
CsaV3_6G036910 Cucumis sativus L. HOM05D005470 ORTHO05D006855 8.2e-84 314.7 220 69.5
CARHR182880 Cardamine hirsuta HOM05D005470 ORTHO05D006855 1.1e-83 314.3 226 66.4
Thhalv10004618m.g Eutrema salsugineum HOM05D005470 ORTHO05D006855 1.1e-83 314.3 234 65.8
Sp2g19240 Schrenkiella parvula HOM05D005470 ORTHO05D006855 9.1e-83 311.2 233 66.1
Peaxi162Scf00107g01116 Petunia axillaris HOM05D005470 ORTHO05D006855 5.0e-81 305.4 226 66.8
ATR0736G181 Amborella trichopoda HOM05D005470 ORTHO05D006855 9.4e-80 301.2 243 60.1
Os03g0851800 Oryza sativa ssp. japonica HOM05D005470 ORTHO05D006855 7.4e-77 291.6 234 64.5
HPP92_021568 Vanilla planifolia HOM05D005470 ORTHO05D006855 5.3e-75 285.4 225 64.0
SEGI_26814 Sequoiadendron giganteum HOM05D005470 ORTHO05D006855 1.7e-73 280.4 225 60.9
SHI28627 Sapria himalayana HOM05D005470 ORTHO05D006855 2.2e-73 280.0 228 64.5
Zm00001eb064670 Zea mays HOM05D005470 ORTHO05D006855 6.5e-73 278.5 235 60.4
SEGI_32261 Sequoiadendron giganteum HOM05D005470 ORTHO05D006855 1.5e-72 277.3 225 59.6
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 3.2e-72 276.2 297 50.8
Mapoly0006s0023 Marchantia polymorpha HOM05D005470 ORTHO05D006855 2.3e-70 270.0 224 57.1
Atru.chr5.2014 Acer truncatum HOM05D005470 ORTHO05D006855 3.3e-69 266.2 189 67.7
Pp3c24_12730 Physcomitrium patens HOM05D005470 ORTHO05D006855 2.8e-68 263.1 221 57.0
SMO144G0038 Selaginella moellendorffii HOM05D005470 ORTHO05D006855 3.7e-68 262.7 228 55.3
SMO351G0371 Selaginella moellendorffii HOM05D005470 ORTHO05D006855 4.8e-68 262.3 228 56.1
TAR636G1319 Trochodendron aralioides HOM05D005470 ORTHO05D006855 1.2e-66 257.7 161 81.4
MCO10G244 Micromonas commoda HOM05D005470 ORTHO05D006855 1.6e-58 230.7 254 49.2
CBR_g41676 Chara braunii HOM05D005470 ORTHO05D006855 7.7e-58 228.4 269 44.6
AUR62008875 Chenopodium quinoa HOM05D005470 ORTHO05D006855 1.7e-52 210.7 198 56.1
vmacro15783 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 1.8e-51 207.2 158 67.1
Cre02.g090150 Chlamydomonas reinhardtii HOM05D005470 ORTHO05D006855 5.4e-51 205.7 220 47.3
HanXRQChr16g0514371 Helianthus annuus HOM05D005470 ORTHO05D006855 5.4e-51 205.7 157 64.3
ECA236G4489 Erigeron canadensis HOM05D005470 ORTHO05D006855 7.0e-51 205.3 149 69.1
unitig_92.g28106 Utricularia gibba HOM05D005470 ORTHO05D006855 2.4e-43 180.3 107 77.6
Haze_26957 Corylus avellana HOM05D005470 ORTHO05D006855 2.0e-37 160.6 217 40.6
CANSAT01G1736 Cannabis sativa HOM05D005470 ORTHO05D006855 8.3e-36 155.2 106 70.8
vmacro23327 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 4.1e-35 152.9 158 53.2
Cfa025604 Carpinus fangiana HOM05D005470 ORTHO05D006855 2.7e-34 150.2 230 39.1
CANSAT54G2179 Cannabis sativa HOM05D005470 ORTHO05D006855 1.2e-21 108.2 119 52.1
CAN.G122.7 Capsicum annuum HOM05D005470 ORTHO05D006855 5.8e-21 105.9 117 48.7
CSS0038259 Camellia sinensis var. sinensis HOM05D005470 ORTHO05D006855 1.4e-19 101.3 84 58.3
MD05G1178000 Malus domestica HOM05D005470 ORTHO05D006855 1.9e-19 100.9 112 52.7
vmacro15781 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 7.1e-19 99.0 158 43.7
SEGI_11949 Sequoiadendron giganteum HOM05D005470 ORTHO05D006855 2.1e-18 97.4 151 36.4
MD05G1177900 Malus domestica HOM05D005470 ORTHO05D006855 1.3e-17 94.7 97 55.7
CsaV3_1G001100 Cucumis sativus L. HOM05D005470 ORTHO05D006855 8.7e-17 92.0 62 72.6
Glyma.08G355700 Glycine max HOM05D005470 ORTHO05D006855 4.4e-13 79.7 209 31.1


User provided reference genes

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