Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0056 Trochodendron aralioides HOM05D005806 ORTHO05D007119 8.2e-264 913.3 501 100.0
TAR365G0831 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.5e-257 892.5 505 97.0
Nn3g21558 Nelumbo nucifera HOM05D005806 ORTHO05D007119 3.0e-149 532.7 529 64.5
Nn4g25745 Nelumbo nucifera HOM05D005806 ORTHO05D007119 2.8e-147 526.2 522 59.2
TWI09G1342 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 5.9e-137 491.9 512 59.8
CSS0028282 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 1.0e-136 491.1 497 60.2
ClCG05G006280 Citrullus lanatus HOM05D005806 ORTHO05D007119 1.0e-133 481.1 516 55.2
GSVIVG01035100001 Vitis vinifera HOM05D005806 ORTHO05D007119 6.7e-133 478.4 505 60.8
Duzib151G0580 Durio zibethinus HOM05D005806 ORTHO05D007119 5.7e-132 475.3 520 54.8
Thecc.04G290100 Theobroma cacao HOM05D005806 ORTHO05D007119 2.2e-131 473.4 518 55.4
Sed0007282 Sechium edule HOM05D005806 ORTHO05D007119 2.8e-131 473.0 518 58.9
Cpa.g.sc50.151 Carica papaya HOM05D005806 ORTHO05D007119 3.7e-131 472.6 521 58.5
COL.COLO4_13808 Corchorus olitorius HOM05D005806 ORTHO05D007119 1.8e-130 470.3 534 56.7
Duzib212G0552 Durio zibethinus HOM05D005806 ORTHO05D007119 1.2e-129 467.6 522 54.4
Manes.15G010100 Manihot esculenta HOM05D005806 ORTHO05D007119 1.4e-127 460.7 525 57.9
CSS0038808 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 1.9e-127 460.3 491 59.5
CSS0004144 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 3.6e-126 456.1 491 59.3
MBI18_g21793_MAGBIO Magnolia biondii HOM05D005806 ORTHO05D007119 6.1e-126 455.3 512 57.4
QL06p010760 Quercus lobata HOM05D005806 ORTHO05D007119 6.1e-126 455.3 535 57.8
Dinv44345 Davidia involucrata HOM05D005806 ORTHO05D007119 3.9e-125 452.6 510 55.3
Manes.03G199200 Manihot esculenta HOM05D005806 ORTHO05D007119 3.3e-124 449.5 531 55.7
Aqoxy5G00792 Aquilegia oxysepala HOM05D005806 ORTHO05D007119 1.8e-122 443.7 519 53.8
Atru.chr4.2914 Acer truncatum HOM05D005806 ORTHO05D007119 2.4e-122 443.4 508 53.1
Sabra10G0005700 Salix brachista HOM05D005806 ORTHO05D007119 1.7e-120 437.2 509 56.8
Cfa015433 Carpinus fangiana HOM05D005806 ORTHO05D007119 2.2e-120 436.8 534 55.2
Eucgr.B01574 Eucalyptus grandis HOM05D005806 ORTHO05D007119 7.2e-119 431.8 533 54.4
Lj3A825T23 Lonicera japonica HOM05D005806 ORTHO05D007119 9.4e-119 431.4 531 54.2
Ciclev10004804m.g Citrus clementina HOM05D005806 ORTHO05D007119 2.7e-118 429.9 527 55.4
CiPaw.01G145000 Carya illinoinensis HOM05D005806 ORTHO05D007119 3.6e-118 429.5 530 53.8
Potri.010G007000 Populus trichocarpa HOM05D005806 ORTHO05D007119 1.0e-117 427.9 508 57.7
MELO3C006687.2 Cucumis melo HOM05D005806 ORTHO05D007119 1.8e-117 427.2 513 55.2
AUR62018055 Chenopodium quinoa HOM05D005806 ORTHO05D007119 4.0e-117 426.0 538 50.9
Haze_01151 Corylus avellana HOM05D005806 ORTHO05D007119 4.0e-117 426.0 478 58.4
Gorai.011G193400 Gossypium raimondii HOM05D005806 ORTHO05D007119 4.0e-117 426.0 533 50.8
TAR362G1179 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.2e-116 424.5 326 74.5
Gohir.D10G172900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 3.3e-116 422.9 533 54.2
TAR633G1904 Trochodendron aralioides HOM05D005806 ORTHO05D007119 3.1e-114 416.4 289 75.1
Prupe.1G130400 Prunus persica HOM05D005806 ORTHO05D007119 4.1e-114 416.0 518 53.7
Sc13g0003160 Simmondsia chinensis HOM05D005806 ORTHO05D007119 7.0e-114 415.2 475 56.0
Hund20516 Selenicereus undatus HOM05D005806 ORTHO05D007119 9.1e-114 414.8 533 50.5
Solyc01g066050.3 Solanum lycopersicum HOM05D005806 ORTHO05D007119 2.0e-113 413.7 556 49.1
MD16G1163000 Malus domestica HOM05D005806 ORTHO05D007119 1.0e-112 411.4 515 50.5
TWI73G0620 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 1.0e-112 411.4 461 54.0
Sopen01g027600 Solanum pennellii HOM05D005806 ORTHO05D007119 1.3e-112 411.0 556 48.6
FAN12G2548 Fragaria x ananassa HOM05D005806 ORTHO05D007119 2.2e-112 410.2 509 51.7
Actinidia40301 Actinidia chinensis HOM05D005806 ORTHO05D007119 2.9e-112 409.8 465 53.1
RcHm_v2.0_Chr4g0423561 Rosa chinensis HOM05D005806 ORTHO05D007119 1.1e-111 407.9 517 54.5
FvH4_4g18770 Fragaria vesca HOM05D005806 ORTHO05D007119 1.5e-111 407.5 509 51.5
FAN12G3921 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.5e-111 407.5 509 51.5
THA.LOC104802587 Tarenaya hassleriana HOM05D005806 ORTHO05D007119 4.2e-111 406.0 537 53.4
CANSAT78G0145 Cannabis sativa HOM05D005806 ORTHO05D007119 7.2e-111 405.2 521 53.0
Lsat_1_v5_gn_6_78121 Lactuca sativa HOM05D005806 ORTHO05D007119 1.0e-109 401.4 538 48.0
vmacro23238 Vaccinium macrocarpon HOM05D005806 ORTHO05D007119 1.0e-109 401.4 563 47.2
Ah.13g074780 Amaranthus hybridus HOM05D005806 ORTHO05D007119 3.4e-108 396.4 544 47.2
PGSC0003DMG400016813 Solanum tuberosum HOM05D005806 ORTHO05D007119 3.4e-108 396.4 526 49.6
CARHR092010 Cardamine hirsuta HOM05D005806 ORTHO05D007119 4.4e-108 396.0 521 48.6
Cc03_g01460 Coffea canephora HOM05D005806 ORTHO05D007119 5.7e-108 395.6 533 47.8
Oeu054004.1 Olea europaea HOM05D005806 ORTHO05D007119 9.8e-108 394.8 507 53.6
EL10Ac3g06659 Beta vulgaris HOM05D005806 ORTHO05D007119 2.8e-107 393.3 535 48.6
FAN07G1609 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.1e-106 391.3 497 50.5
FAN17G0801 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.1e-106 391.3 509 50.5
CsaV3_3G014910 Cucumis sativus L. HOM05D005806 ORTHO05D007119 9.1e-106 388.3 470 52.3
CAN.G14.19 Capsicum annuum HOM05D005806 ORTHO05D007119 1.6e-105 387.5 526 52.9
DCAR_002485 Daucus carota HOM05D005806 ORTHO05D007119 4.5e-105 386.0 513 49.1
arahy.Tifrunner.gnm1.ann1.TZ6N57 Arachis hypogaea HOM05D005806 ORTHO05D007119 1.0e-104 384.8 527 50.3
Oeu006424.1 Olea europaea HOM05D005806 ORTHO05D007119 3.3e-103 379.8 526 51.9
AT3G16760 Arabidopsis thaliana HOM05D005806 ORTHO05D007119 5.5e-103 379.0 516 47.1
PSO832G4515 Papaver somniferum HOM05D005806 ORTHO05D007119 7.2e-103 378.6 434 56.2
HanXRQChr03g0084151 Helianthus annuus HOM05D005806 ORTHO05D007119 9.5e-103 378.3 568 45.8
PSO210G6439 Papaver somniferum HOM05D005806 ORTHO05D007119 1.2e-102 377.9 434 56.2
Gohir.A10G166900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 3.6e-102 376.3 473 53.7
Carub.0003s1647 Capsella rubella HOM05D005806 ORTHO05D007119 1.8e-101 374.0 532 45.9
Peaxi162Scf00065g01121 Petunia axillaris HOM05D005806 ORTHO05D007119 6.8e-101 372.1 547 47.5
Nitab4.5_0002215g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 2.6e-100 370.2 540 47.8
Nitab4.5_0012392g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 2.6e-100 370.2 479 50.5
Sp3g15010 Schrenkiella parvula HOM05D005806 ORTHO05D007119 1.4e-98 364.4 531 45.2
Aa31LG8G3830 Aethionema arabicum HOM05D005806 ORTHO05D007119 1.2e-97 361.3 529 45.2
Glyma.07G244900 Glycine max HOM05D005806 ORTHO05D007119 2.7e-97 360.1 446 51.6
VMungo1215G2854 Vigna mungo HOM05D005806 ORTHO05D007119 4.5e-97 359.4 459 50.1
CDE12G0749 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 1.3e-96 357.8 531 45.6
Lalb_Chr07g0182271 Lupinus albus HOM05D005806 ORTHO05D007119 6.6e-96 355.5 513 50.7
Ca_21476_v3 Cicer arietinum L. HOM05D005806 ORTHO05D007119 8.6e-96 355.1 516 47.5
BolC1t04724H Brassica oleracea HOM05D005806 ORTHO05D007119 5.6e-95 352.4 523 44.9
BcaC09g48634 Brassica carinata HOM05D005806 ORTHO05D007119 9.5e-95 351.7 518 48.3
BraA01t03813Z Brassica rapa HOM05D005806 ORTHO05D007119 9.5e-95 351.7 512 48.6
Thhalv10020624m.g Eutrema salsugineum HOM05D005806 ORTHO05D007119 1.2e-94 351.3 528 44.9
C01p47550 Brassica napus HOM05D005806 ORTHO05D007119 2.1e-94 350.5 523 45.3
Glyma.17G028900 Glycine max HOM05D005806 ORTHO05D007119 1.4e-93 347.8 486 49.6
Migut.N00070 Erythranthe guttata HOM05D005806 ORTHO05D007119 6.8e-93 345.5 527 46.7
Medtr4g120360 Medicago truncatula HOM05D005806 ORTHO05D007119 6.8e-93 345.5 514 46.7
SGA_v2.0_scaffold91G28032 Striga asiatica HOM05D005806 ORTHO05D007119 1.7e-91 340.9 532 44.9
A01p37530 Brassica napus HOM05D005806 ORTHO05D007119 2.7e-89 333.6 515 47.0
Phvul.003G107800 Phaseolus vulgaris HOM05D005806 ORTHO05D007119 3.5e-89 333.2 457 51.6
ECA240G3979 Erigeron canadensis HOM05D005806 ORTHO05D007119 6.0e-89 332.4 421 49.6
Lj4g0013254 Lotus japonicus HOM05D005806 ORTHO05D007119 6.0e-89 332.4 526 49.4
HPP92_002231 Vanilla planifolia HOM05D005806 ORTHO05D007119 1.7e-88 330.9 427 46.1
SalBow5G0238 Salvia bowleyana HOM05D005806 ORTHO05D007119 3.0e-88 330.1 581 43.7
MSTRG.10119 Avicennia marina HOM05D005806 ORTHO05D007119 6.6e-88 328.9 537 49.0
PGR031G2493 Punica granatum HOM05D005806 ORTHO05D007119 1.1e-87 328.2 469 51.4
Dinv29717 Davidia involucrata HOM05D005806 ORTHO05D007119 6.2e-86 322.4 287 67.9
Psat4g025560 Pisum sativum HOM05D005806 ORTHO05D007119 4.3e-79 299.7 516 42.6
CDE01G0725 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 1.2e-78 298.1 506 45.8
SEGI_25850 Sequoiadendron giganteum HOM05D005806 ORTHO05D007119 1.4e-74 284.6 593 38.1
AUR62015254 Chenopodium quinoa HOM05D005806 ORTHO05D007119 5.4e-74 282.7 292 56.2
arahy.Tifrunner.gnm1.ann1.T7VR84 Arachis hypogaea HOM05D005806 ORTHO05D007119 1.7e-72 277.7 303 57.8
Os03g0340700 Oryza sativa ssp. japonica HOM05D005806 ORTHO05D007119 5.6e-71 272.7 529 39.9
TAR633G1627 Trochodendron aralioides HOM05D005806 ORTHO05D007119 3.6e-62 243.4 178 74.2
Zm00001eb016320 Zea mays HOM05D005806 ORTHO05D007119 4.8e-62 243.0 518 40.7
Lalb_Chr13g0298181 Lupinus albus HOM05D005806 ORTHO05D007119 9.9e-60 235.3 248 63.7
MD13G1163500 Malus domestica HOM05D005806 ORTHO05D007119 3.9e-56 223.4 297 46.1
TAR362G0821 Trochodendron aralioides HOM05D005806 ORTHO05D007119 5.1e-56 223.0 161 71.4
Rhsim04G0227400 Rhododendron simsii HOM05D005806 ORTHO05D007119 4.2e-50 203.4 417 36.7
HanXRQChr13g0413981 Helianthus annuus HOM05D005806 ORTHO05D007119 1.9e-47 194.5 146 66.4
AL3G29680 Arabidopsis lyrata HOM05D005806 ORTHO05D007119 9.6e-47 192.2 304 45.7
unitig_699.g19987 Utricularia gibba HOM05D005806 ORTHO05D007119 2.6e-44 184.1 524 36.5
Dinv29718 Davidia involucrata HOM05D000037 ORTHO05D000150 1.1e-37 162.2 126 65.9
AUR62015253 Chenopodium quinoa HOM05D005806 ORTHO05D007119 2.6e-36 157.5 176 55.1
SMO334G0099 Selaginella moellendorffii HOM05D005806 ORTHO05D007119 1.6e-33 148.3 207 44.9
AagrBONN_evm.TU.Sc2ySwM_228.3483 Anthoceros agrestis HOM05D005806 ORTHO05D007119 4.6e-33 146.7 236 50.0
CSS0010946 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 1.9e-26 124.8 71 80.3
Mapoly0005s0119 Marchantia polymorpha HOM05D005806 ORTHO05D007119 1.4e-24 118.6 546 26.9
HPP92_002153 Vanilla planifolia HOM05D005806 ORTHO05D007119 1.4e-24 118.6 96 61.5
CSS0023833 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 6.7e-24 116.3 71 76.1
Pp3c12_16600 Physcomitrium patens HOM05D005806 ORTHO05D007119 1.5e-23 115.2 442 29.4
Pp3c4_12130 Physcomitrium patens HOM05D005806 ORTHO05D007119 2.0e-20 104.8 411 34.1
CBR_g4056 Chara braunii HOM05D005806 ORTHO05D007119 4.2e-18 97.1 229 35.8
SGA_v2.0_scaffold119G32699 Striga asiatica HOM05D005806 ORTHO05D007119 2.6e-15 87.8 71 59.2
FvH4_5g32480 Fragaria vesca HOM05D005806 ORTHO05D007119 5.7e-15 86.7 109 48.6
CBR_g31779 Chara braunii HOM05D000019 ORTHO05D000002 1.0e-11 75.9 93 37.6
Nn2g15616 Nelumbo nucifera HOM05D005806 ORTHO05D007119 2.2e-11 74.7 44 77.3
CBR_g39021 Chara braunii HOM05D000003 ORTHO05D000004 8.0e-09 66.2 90 32.2


User provided reference genes

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