Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G1230 Trochodendron aralioides HOM05D003908 ORTHO05D004488 4.1e-116 421.4 212 100.0
Aqoxy5G00367 Aquilegia oxysepala HOM05D003908 ORTHO05D004488 1.3e-37 160.6 103 83.5
Haze_04363 Corylus avellana HOM05D003908 ORTHO05D004488 1.3e-37 160.6 88 92.0
Aqoxy6G02470 Aquilegia oxysepala HOM05D003908 ORTHO05D004488 1.7e-37 160.2 103 82.5
Cfa006421 Carpinus fangiana HOM05D003908 ORTHO05D004488 3.8e-37 159.1 103 81.6
Prupe.5G006500 Prunus persica HOM05D003908 ORTHO05D004488 6.5e-37 158.3 103 81.6
ATR0787G044 Amborella trichopoda HOM05D003908 ORTHO05D004488 8.5e-37 157.9 103 80.6
QL03p025800 Quercus lobata HOM05D003908 ORTHO05D004488 8.5e-37 157.9 102 80.4
TAR633G1149 Trochodendron aralioides HOM05D003908 ORTHO05D004488 8.5e-37 157.9 103 80.6
CiPaw.08G123800 Carya illinoinensis HOM05D003908 ORTHO05D004488 1.5e-36 157.1 103 80.6
CANSAT21G0496 Cannabis sativa HOM05D003908 ORTHO05D004488 2.5e-36 156.4 103 79.6
MBI10_g16831_MAGBIO Magnolia biondii HOM05D003908 ORTHO05D004488 3.2e-36 156.0 103 79.6
Atru.chr4.2009 Acer truncatum HOM05D003908 ORTHO05D004488 4.2e-36 155.6 103 79.6
Lalb_Chr12g0209211 Lupinus albus HOM05D003908 ORTHO05D004488 4.2e-36 155.6 103 78.6
Prupe.6G005500 Prunus persica HOM05D003908 ORTHO05D004488 4.2e-36 155.6 103 79.6
Peaxi162Scf00198g01017 Petunia axillaris HOM05D003908 ORTHO05D004488 5.5e-36 155.2 88 89.8
GSVIVG01031574001 Vitis vinifera HOM05D003908 ORTHO05D004488 7.2e-36 154.8 103 78.6
Actinidia19977 Actinidia chinensis HOM05D003908 ORTHO05D004488 9.4e-36 154.5 103 79.6
Actinidia27523 Actinidia chinensis HOM05D003908 ORTHO05D004488 9.4e-36 154.5 103 79.6
CAN.G1299.5 Capsicum annuum HOM05D003908 ORTHO05D004488 9.4e-36 154.5 103 77.7
Dinv34562 Davidia involucrata HOM05D003908 ORTHO05D004488 9.4e-36 154.5 103 78.6
Nitab4.5_0000360g0160 Nicotiana tabacum HOM05D003908 ORTHO05D004488 9.4e-36 154.5 103 79.6
Nitab4.5_0000443g0180 Nicotiana tabacum HOM05D003908 ORTHO05D004488 9.4e-36 154.5 103 79.6
Nitab4.5_0002776g0060 Nicotiana tabacum HOM05D003908 ORTHO05D004488 9.4e-36 154.5 103 79.6
Psat7g086640 Pisum sativum HOM05D003908 ORTHO05D004488 9.4e-36 154.5 103 77.7
Solyc02g068450.3 Solanum lycopersicum HOM05D003908 ORTHO05D004488 9.4e-36 154.5 103 78.6
Sopen02g017590 Solanum pennellii HOM05D003908 ORTHO05D004488 9.4e-36 154.5 103 78.6
PGSC0003DMG400009421 Solanum tuberosum HOM05D003908 ORTHO05D004488 9.4e-36 154.5 103 78.6
Thecc.05G283700 Theobroma cacao HOM05D003908 ORTHO05D004488 9.4e-36 154.5 103 76.7
unitig_22.g5278 Utricularia gibba HOM05D003908 ORTHO05D004488 9.4e-36 154.5 103 79.6
Atru.chr2.813 Acer truncatum HOM05D003908 ORTHO05D004488 1.2e-35 154.1 103 78.6
arahy.Tifrunner.gnm1.ann1.95Q6AF Arachis hypogaea HOM05D003908 ORTHO05D004488 1.2e-35 154.1 103 78.6
arahy.Tifrunner.gnm1.ann1.XQ21SD Arachis hypogaea HOM05D003908 ORTHO05D004488 1.2e-35 154.1 103 78.6
arahy.Tifrunner.gnm1.ann1.Y10HXA Arachis hypogaea HOM05D003908 ORTHO05D004488 1.2e-35 154.1 103 78.6
Ca_18213_v3 Cicer arietinum L. HOM05D003908 ORTHO05D004488 1.2e-35 154.1 103 77.7
Ciclev10002833m.g Citrus clementina HOM05D003908 ORTHO05D004488 1.2e-35 154.1 103 80.6
Lj4g0023890 Lotus japonicus HOM05D003908 ORTHO05D004488 1.2e-35 154.1 103 76.7
arahy.Tifrunner.gnm1.ann1.LT9XWZ Arachis hypogaea HOM05D003908 ORTHO05D004488 1.6e-35 153.7 103 77.7
CSS0036720 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.6e-35 153.7 103 77.7
CSS0040700 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.6e-35 153.7 103 77.7
CSS0045088 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.6e-35 153.7 103 77.7
MBI07_g21062_MAGBIO Magnolia biondii HOM05D003908 ORTHO05D004488 1.6e-35 153.7 103 77.7
SalBow3G3620 Salvia bowleyana HOM05D003908 ORTHO05D004488 1.6e-35 153.7 103 77.7
THA.LOC104825983 Tarenaya hassleriana HOM05D003908 ORTHO05D004488 1.6e-35 153.7 103 76.7
vmacro14877 Vaccinium macrocarpon HOM05D003908 ORTHO05D004488 1.6e-35 153.7 103 77.7
CSS0027656 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 2.1e-35 153.3 103 77.7
Eucgr.C04384 Eucalyptus grandis HOM05D003908 ORTHO05D004488 2.1e-35 153.3 103 77.7
Sc17g0001030 Simmondsia chinensis HOM05D003908 ORTHO05D004488 2.1e-35 153.3 103 77.7
Zm00001eb330190 Zea mays HOM05D003908 ORTHO05D004488 2.1e-35 153.3 101 77.2
Eucgr.B02621 Eucalyptus grandis HOM05D003908 ORTHO05D004488 2.7e-35 152.9 103 77.7
MD04G1224300 Malus domestica HOM05D003908 ORTHO05D004488 2.7e-35 152.9 103 77.7
MSTRG.21514 Avicennia marina HOM05D003908 ORTHO05D004488 3.6e-35 152.5 103 76.7
Dinv04731 Davidia involucrata HOM05D003908 ORTHO05D004488 3.6e-35 152.5 103 78.6
Glyma.05G135300 Glycine max HOM05D003908 ORTHO05D004488 3.6e-35 152.5 103 76.7
Glyma.08G090500 Glycine max HOM05D003908 ORTHO05D004488 3.6e-35 152.5 103 76.7
HanXRQChr03g0088561 Helianthus annuus HOM05D003908 ORTHO05D004488 3.6e-35 152.5 103 75.7
Nitab4.5_0002305g0050 Nicotiana tabacum HOM05D003908 ORTHO05D004488 3.6e-35 152.5 103 78.6
Rhsim01G0201300 Rhododendron simsii HOM05D003908 ORTHO05D004488 3.6e-35 152.5 94 83.0
HPP92_018775 Vanilla planifolia HOM05D003908 ORTHO05D004488 3.6e-35 152.5 103 77.7
FvH4_6g02960 Fragaria vesca HOM05D003908 ORTHO05D004488 4.7e-35 152.1 103 76.7
Nn3g19495 Nelumbo nucifera HOM05D003908 ORTHO05D004488 4.7e-35 152.1 103 78.6
Os02g0824700 Oryza sativa ssp. japonica HOM05D003908 ORTHO05D004488 4.7e-35 152.1 103 75.7
Os04g0137500 Oryza sativa ssp. japonica HOM05D003908 ORTHO05D004488 4.7e-35 152.1 103 75.7
CSS0040042 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 6.1e-35 151.8 103 76.7
Duzib138G1305 Durio zibethinus HOM05D003908 ORTHO05D004488 6.1e-35 151.8 103 76.7
PSO210G0243 Papaver somniferum HOM05D003908 ORTHO05D004488 6.1e-35 151.8 103 76.7
PSO832G4196 Papaver somniferum HOM05D003908 ORTHO05D004488 6.1e-35 151.8 103 76.7
Phvul.002G186900 Phaseolus vulgaris HOM05D003908 ORTHO05D004488 6.1e-35 151.8 103 76.7
Rhsim01G0270200 Rhododendron simsii HOM05D003908 ORTHO05D004488 6.1e-35 151.8 103 76.7
THA.LOC104801254 Tarenaya hassleriana HOM05D003908 ORTHO05D004488 6.1e-35 151.8 103 75.7
Thecc.01G268300 Theobroma cacao HOM05D003908 ORTHO05D004488 6.1e-35 151.8 103 76.7
CDE09G0316 Ceratophyllum demersum HOM05D003908 ORTHO05D004488 8.0e-35 151.4 101 77.2
COL.COLO4_06708 Corchorus olitorius HOM05D003908 ORTHO05D004488 8.0e-35 151.4 82 90.2
Duzib106G0327 Durio zibethinus HOM05D003908 ORTHO05D004488 8.0e-35 151.4 101 76.2
Migut.D00367 Erythranthe guttata HOM05D003908 ORTHO05D004488 8.0e-35 151.4 103 76.7
Gohir.A08G188000 Gossypium hirsutum HOM05D003908 ORTHO05D004488 8.0e-35 151.4 103 75.7
Gohir.D08G206400 Gossypium hirsutum HOM05D003908 ORTHO05D004488 8.0e-35 151.4 103 75.7
Gorai.004G218600 Gossypium raimondii HOM05D003908 ORTHO05D004488 8.0e-35 151.4 103 75.7
Hma1.2p1_0760F.1_g214230 Hydrangea macrophylla HOM05D003908 ORTHO05D004488 8.0e-35 151.4 103 74.8
SGA_v2.0_scaffold138G35289 Striga asiatica HOM05D003696 ORTHO05D005158 8.0e-35 151.4 103 76.7
SGA_v2.0_scaffold580G53041 Striga asiatica HOM05D006471 ORTHO05D004488 8.0e-35 151.4 103 76.7
HPP92_001854 Vanilla planifolia HOM05D003908 ORTHO05D004488 8.0e-35 151.4 103 76.7
Zm00001eb111070 Zea mays HOM05D003908 ORTHO05D004488 8.0e-35 151.4 101 76.2
COL.COLO4_15346 Corchorus olitorius HOM05D003908 ORTHO05D004488 1.0e-34 151.0 101 77.2
Gohir.A08G215400 Gossypium hirsutum HOM05D003908 ORTHO05D004488 1.0e-34 151.0 103 74.8
Gorai.004G246600 Gossypium raimondii HOM05D003908 ORTHO05D004488 1.0e-34 151.0 103 74.8
Peaxi162Scf00199g00925 Petunia axillaris HOM05D003908 ORTHO05D004488 1.0e-34 151.0 103 77.7
Sabra05G0166800 Salix brachista HOM05D003908 ORTHO05D004488 1.0e-34 151.0 103 77.7
VMungo0251G3698 Vigna mungo HOM05D003908 ORTHO05D004488 1.0e-34 151.0 103 75.7
Ah.11g050040 Amaranthus hybridus HOM05D005044 ORTHO05D006799 1.4e-34 150.6 82 91.5
MD12G1241000 Malus domestica HOM05D003908 ORTHO05D004488 1.4e-34 150.6 103 76.7
Potri.005G217600 Populus trichocarpa HOM05D003908 ORTHO05D004488 1.4e-34 150.6 103 76.7
PGR031G1854 Punica granatum HOM05D003908 ORTHO05D004488 1.4e-34 150.6 103 77.7
ClCG03G017370 Citrullus lanatus HOM05D003908 ORTHO05D004488 1.8e-34 150.2 103 77.7
ECA240G0363 Erigeron canadensis HOM05D003908 ORTHO05D004488 1.8e-34 150.2 103 73.8
FAN05G0658 Fragaria x ananassa HOM05D003908 ORTHO05D004488 1.8e-34 150.2 103 75.7
FAN09G2689 Fragaria x ananassa HOM05D003908 ORTHO05D004488 1.8e-34 150.2 103 75.7
FAN14G5491 Fragaria x ananassa HOM05D003908 ORTHO05D004488 1.8e-34 150.2 103 75.7
Hma1.2p1_0172F.1_g076150 Hydrangea macrophylla HOM05D003908 ORTHO05D004488 2.3e-34 149.8 103 75.7
Sed0027410 Sechium edule HOM05D003908 ORTHO05D004488 2.3e-34 149.8 103 76.7
Aa31LG5G2250 Aethionema arabicum HOM05D003908 ORTHO05D004488 3.0e-34 149.4 103 73.8
Cc09_g07930 Coffea canephora HOM05D003908 ORTHO05D004488 3.0e-34 149.4 103 74.8
Oeu018177.1 Olea europaea HOM05D003908 ORTHO05D004488 3.0e-34 149.4 103 76.7
RcHm_v2.0_Chr3g0451151 Rosa chinensis HOM05D003908 ORTHO05D004488 3.0e-34 149.4 103 75.7
TWI12G1100 Tripterygium wilfordii HOM05D003908 ORTHO05D004488 3.0e-34 149.4 103 74.8
TWI18G0751 Tripterygium wilfordii HOM05D003908 ORTHO05D004488 3.0e-34 149.4 103 76.7
Cpa.g.sc117.89 Carica papaya HOM05D003908 ORTHO05D004488 4.0e-34 149.1 103 75.7
PSO135G0069 Papaver somniferum HOM05D003908 ORTHO05D004488 4.0e-34 149.1 103 75.7
Ah.02g111400 Amaranthus hybridus HOM05D003908 ORTHO05D004488 5.2e-34 148.7 101 77.2
Lsat_1_v5_gn_6_91060 Lactuca sativa HOM05D003908 ORTHO05D004488 5.2e-34 148.7 103 73.8
Lj1g0011223 Lotus japonicus HOM05D003908 ORTHO05D004488 5.2e-34 148.7 103 77.7
PSO384G1262 Papaver somniferum HOM05D003908 ORTHO05D004488 5.2e-34 148.7 103 75.7
TPR.G34752 Trifolium pratense HOM05D003908 ORTHO05D004488 5.2e-34 148.7 103 73.8
Duzib133G0635 Durio zibethinus HOM05D003908 ORTHO05D004488 6.7e-34 148.3 101 74.3
Sed0024016 Sechium edule HOM05D003908 ORTHO05D004488 6.7e-34 148.3 103 75.7
MELO3C015218.2 Cucumis melo HOM05D003908 ORTHO05D004488 8.8e-34 147.9 101 77.2
CsaV3_1G042520 Cucumis sativus L. HOM05D003908 ORTHO05D004488 8.8e-34 147.9 101 77.2
Hund02874 Selenicereus undatus HOM05D003908 ORTHO05D004488 8.8e-34 147.9 101 76.2
Manes.07G050600 Manihot esculenta HOM05D003908 ORTHO05D004488 2.0e-33 146.7 103 74.8
Gohir.D08G232100 Gossypium hirsutum HOM05D003908 ORTHO05D004488 2.6e-33 146.4 103 73.8
Gohir.A13G052900 Gossypium hirsutum HOM05D003908 ORTHO05D004488 5.7e-33 145.2 103 73.8
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 9.7e-33 144.4 101 73.3
CiPaw.04G181400 Carya illinoinensis HOM05D003908 ORTHO05D004488 1.7e-32 143.7 97 73.2
Thhalv10029066m.g Eutrema salsugineum HOM05D003908 ORTHO05D004488 1.7e-32 143.7 98 73.5
EL10Ac5g10467 Beta vulgaris HOM05D003908 ORTHO05D004488 2.2e-32 143.3 102 74.5
Actinidia24932 Actinidia chinensis HOM05D005044 ORTHO05D006799 3.7e-32 142.5 95 76.8
Gorai.013G079800 Gossypium raimondii HOM05D003908 ORTHO05D004488 3.7e-32 142.5 103 72.8
Sp6g02530 Schrenkiella parvula HOM05D003908 ORTHO05D004488 4.8e-32 142.1 98 72.4
BcaB01g02026 Brassica carinata HOM05D003908 ORTHO05D004488 6.3e-32 141.7 98 71.4
BcaB01g02477 Brassica carinata HOM05D003908 ORTHO05D004488 6.3e-32 141.7 98 71.4
BcaC04g24002 Brassica carinata HOM05D003908 ORTHO05D004488 6.3e-32 141.7 98 71.4
A03p30970 Brassica napus HOM05D003908 ORTHO05D004488 6.3e-32 141.7 98 71.4
A09p02050 Brassica napus HOM05D003908 ORTHO05D004488 6.3e-32 141.7 98 71.4
C02p39240 Brassica napus HOM05D003908 ORTHO05D004488 6.3e-32 141.7 98 71.4
C09p02140 Brassica napus HOM05D003908 ORTHO05D004488 6.3e-32 141.7 98 71.4
BolC2t09935H Brassica oleracea HOM05D003908 ORTHO05D004488 6.3e-32 141.7 98 71.4
BolC9t53144H Brassica oleracea HOM05D003908 ORTHO05D004488 6.3e-32 141.7 98 71.4
BraA03t12274Z Brassica rapa HOM05D003908 ORTHO05D004488 6.3e-32 141.7 98 71.4
BraA09t35854Z Brassica rapa HOM05D003908 ORTHO05D004488 6.3e-32 141.7 98 71.4
CARHR250910 Cardamine hirsuta HOM05D003908 ORTHO05D004488 8.2e-32 141.4 98 71.4
Gohir.D13G069500 Gossypium hirsutum HOM05D003908 ORTHO05D004488 8.2e-32 141.4 103 71.8
AL6G50430 Arabidopsis lyrata HOM05D003908 ORTHO05D004488 1.1e-31 141.0 98 71.4
AT4G02620 Arabidopsis thaliana HOM05D003908 ORTHO05D004488 1.1e-31 141.0 98 71.4
Carub.0006s3452 Capsella rubella HOM05D003908 ORTHO05D004488 1.1e-31 141.0 98 71.4
BcaC01g06745 Brassica carinata HOM05D003908 ORTHO05D004488 1.4e-31 140.6 98 70.4
C03p37740 Brassica napus HOM05D003908 ORTHO05D004488 1.4e-31 140.6 98 70.4
BolC3t16064H Brassica oleracea HOM05D003908 ORTHO05D004488 1.4e-31 140.6 98 70.4
Ciclev10022651m.g Citrus clementina HOM05D003908 ORTHO05D004488 3.1e-31 139.4 103 72.8
BcaC03g16154 Brassica carinata HOM05D003908 ORTHO05D004488 1.2e-30 137.5 98 68.4
CSS0024256 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 7.7e-30 134.8 93 73.1
CSS0029390 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 7.7e-30 134.8 93 73.1
CSS0046821 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 7.7e-30 134.8 93 73.1
CDE11G1041 Ceratophyllum demersum HOM05D005443 ORTHO05D004488 7.7e-30 134.8 88 78.4
Pp3c6_17470 Physcomitrium patens HOM05D003908 ORTHO05D004488 2.2e-29 133.3 102 64.7
Mapoly0079s0004 Marchantia polymorpha HOM05D003908 ORTHO05D004488 3.8e-29 132.5 99 65.7
Pp3c25_8080 Physcomitrium patens HOM05D003908 ORTHO05D004488 6.5e-29 131.7 104 66.3
SEGI_40634 Sequoiadendron giganteum HOM05D003908 ORTHO05D004488 5.5e-28 128.6 104 67.3
CSS0043230 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.6e-27 127.1 93 69.9
SMO367G0680 Selaginella moellendorffii HOM05D003908 ORTHO05D004488 4.7e-27 125.6 102 59.8
Actinidia04661 Actinidia chinensis HOM05D003908 ORTHO05D004488 8.0e-27 124.8 69 88.4
Actinidia21151 Actinidia chinensis HOM05D003908 ORTHO05D004488 8.0e-27 124.8 69 88.4
CSS0038153 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 3.0e-26 122.9 90 68.9
CBR_g38932 Chara braunii HOM05D003908 ORTHO05D004488 1.2e-25 120.9 101 57.4
CSS0044738 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 1.3e-24 117.5 89 69.7
Haze_21722 Corylus avellana HOM05D003908 ORTHO05D004488 2.2e-24 116.7 101 65.3
BcaB05g23651 Brassica carinata HOM05D003908 ORTHO05D004488 2.8e-24 116.3 113 55.8
Nitab4.5_0000138g0160 Nicotiana tabacum HOM05D003908 ORTHO05D004488 6.3e-24 115.2 63 90.5
Nitab4.5_0008708g0010 Nicotiana tabacum HOM05D003908 ORTHO05D004488 2.7e-22 109.8 68 80.9
PRCOL_00000544 Prasinoderma coloniale HOM05D003908 ORTHO05D004488 1.0e-21 107.8 93 52.7
Lalb_Chr20g0122811 Lupinus albus HOM05D003908 ORTHO05D004488 3.8e-21 105.9 55 94.5
MCO03G460 Micromonas commoda HOM05D003908 ORTHO05D004488 8.5e-21 104.8 99 53.5
DCAR_012514 Daucus carota HOM05D003908 ORTHO05D004488 1.5e-20 104.0 52 98.1
Hund09564 Selenicereus undatus HOM05D003908 ORTHO05D004488 1.5e-20 104.0 53 94.3
DCAR_018445 Daucus carota HOM05D003908 ORTHO05D004488 3.2e-20 102.8 52 96.2
COL.COLO4_30210 Corchorus olitorius HOM05D003908 ORTHO05D004488 1.0e-18 97.8 55 87.3
Cre10.g446550 Chlamydomonas reinhardtii HOM05D003908 ORTHO05D004488 6.8e-18 95.1 89 48.3
Haze_26154 Corylus avellana HOM05D003908 ORTHO05D004488 1.4e-15 87.4 74 52.7
CSS0012932 Camellia sinensis var. sinensis HOM05D003908 ORTHO05D004488 4.7e-11 72.4 35 91.4
Peaxi162Scf01294g00317 Petunia axillaris HOM05D003908 ORTHO05D004488 4.0e-10 69.3 35 88.6
AagrBONN_evm.TU.Sc2ySwM_368.148 Anthoceros agrestis HOM05D003908 ORTHO05D004488 4.4e-09 65.9 62 56.5


User provided reference genes

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