Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G1145 Trochodendron aralioides HOM05D006547 ORTHO05D008112 1.4e-69 266.2 138 100.0
TAR633G2779 Trochodendron aralioides HOM05D006547 ORTHO05D008112 1.6e-47 193.0 139 79.1
TAR365G0268 Trochodendron aralioides HOM05D006547 ORTHO05D008112 1.1e-40 170.2 138 67.4
Dinv15146 Davidia involucrata HOM05D004325 ORTHO05D005470 6.8e-35 151.0 138 61.6
Atru.chr5.966 Acer truncatum HOM05D006547 ORTHO05D008112 1.4e-32 143.3 144 58.3
Thecc.02G266700 Theobroma cacao HOM05D006547 ORTHO05D008112 2.5e-29 132.5 138 54.3
Duzib248G0337 Durio zibethinus HOM05D006547 ORTHO05D008112 5.5e-29 131.3 138 57.2
Potri.002G193300 Populus trichocarpa HOM05D006547 ORTHO05D008112 2.3e-27 125.9 139 56.8
Sabra14G0087800 Salix brachista HOM05D006547 ORTHO05D008112 1.2e-26 123.6 130 56.2
Potri.014G118300 Populus trichocarpa HOM05D006547 ORTHO05D008112 9.8e-26 120.6 140 52.1
Duzib251G0664 Durio zibethinus HOM05D006547 ORTHO05D008112 1.3e-25 120.2 139 53.2
CiPaw.07G119400 Carya illinoinensis HOM05D006547 ORTHO05D008112 4.9e-25 118.2 146 51.4
QL12p019056 Quercus lobata HOM05D006547 ORTHO05D008112 4.9e-25 118.2 141 54.6
Ciclev10022819m.g Citrus clementina HOM05D006547 ORTHO05D008112 8.3e-25 117.5 138 53.6
Duzib268G0572 Durio zibethinus HOM05D006547 ORTHO05D008112 1.2e-23 113.6 140 50.7
Hma1.2p1_0486F.1_g163490 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 7.8e-23 110.9 138 50.7
Sabra02G0162800 Salix brachista HOM05D006547 ORTHO05D008112 7.8e-23 110.9 138 53.6
CSS0011798 Camellia sinensis var. sinensis HOM05D006547 ORTHO05D008112 1.3e-22 110.2 134 51.5
Glyma.20G175000 Glycine max HOM05D006547 ORTHO05D008112 2.3e-22 109.4 141 52.5
Oeu038038.1 Olea europaea HOM05D006547 ORTHO05D008112 6.6e-22 107.8 103 58.3
Gohir.A12G145800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 4.3e-21 105.1 139 48.2
Gohir.D12G150400 Gossypium hirsutum HOM05D006547 ORTHO05D008112 4.3e-21 105.1 139 48.2
Gorai.008G161900 Gossypium raimondii HOM05D006547 ORTHO05D008112 4.3e-21 105.1 139 48.2
COL.COLO4_23526 Corchorus olitorius HOM05D006547 ORTHO05D008112 5.6e-21 104.8 119 52.9
Nn4g25552 Nelumbo nucifera HOM05D006547 ORTHO05D008112 5.6e-21 104.8 139 47.5
Oeu008480.1 Olea europaea HOM05D006547 ORTHO05D008112 2.1e-20 102.8 148 48.6
Cpa.g.sc18.81 Carica papaya HOM05D006547 ORTHO05D008112 2.8e-20 102.4 130 52.3
MBI18_g22340_MAGBIO Magnolia biondii HOM05D006547 ORTHO05D008112 2.8e-20 102.4 132 47.0
PSO761G0312 Papaver somniferum HOM05D006547 ORTHO05D008112 3.6e-20 102.1 140 49.3
Ca_10619_v3 Cicer arietinum L. HOM05D006547 ORTHO05D008112 4.7e-20 101.7 140 50.7
MBI19_g03260_MAGBIO Magnolia biondii HOM05D001624 ORTHO05D001530 4.7e-20 101.7 124 44.4
CAN.G1280.37 Capsicum annuum HOM05D006547 ORTHO05D008112 8.0e-20 100.9 88 59.1
PSO210G6541 Papaver somniferum HOM05D006547 ORTHO05D008112 2.3e-19 99.4 136 49.3
Glyma.10G217100 Glycine max HOM05D006547 ORTHO05D008112 4.0e-19 98.6 140 49.3
Lj5g0010023 Lotus japonicus HOM05D006547 ORTHO05D008112 5.2e-19 98.2 139 46.8
Phvul.007G089100 Phaseolus vulgaris HOM05D006547 ORTHO05D008112 6.8e-19 97.8 139 51.1
Haze_05072 Corylus avellana HOM05D006547 ORTHO05D008112 3.4e-18 95.5 143 49.0
Gohir.D01G152800 Gossypium hirsutum HOM05D006547 ORTHO05D008112 5.8e-18 94.7 138 42.0
CAN.G293.16 Capsicum annuum HOM05D006547 ORTHO05D008112 9.8e-18 94.0 114 51.8
DCAR_002885 Daucus carota HOM05D006547 ORTHO05D008112 9.8e-18 94.0 103 55.3
TPR.G8830 Trifolium pratense HOM05D006547 ORTHO05D008112 9.8e-18 94.0 138 46.4
Gorai.002G189200 Gossypium raimondii HOM05D006547 ORTHO05D008112 1.7e-17 93.2 138 41.3
Cfa005764 Carpinus fangiana HOM05D006547 ORTHO05D008112 3.7e-17 92.0 136 47.1
Lalb_Chr03g0036161 Lupinus albus HOM05D006547 ORTHO05D008112 4.9e-17 91.7 139 45.3
Manes.01G229900 Manihot esculenta HOM05D006547 ORTHO05D008112 4.9e-17 91.7 139 47.5
CiPaw.08G087700 Carya illinoinensis HOM05D006547 ORTHO05D008112 1.1e-16 90.5 118 50.8
TWI36G0249 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 2.4e-16 89.4 137 48.2
Manes.05G013600 Manihot esculenta HOM05D006547 ORTHO05D008112 3.2e-16 89.0 106 55.7
Sopen01g031050 Solanum pennellii HOM05D006547 ORTHO05D008112 3.2e-16 89.0 113 48.7
Nitab4.5_0000363g0200 Nicotiana tabacum HOM05D006547 ORTHO05D008112 7.0e-16 87.8 83 63.9
Solyc01g079270.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 7.0e-16 87.8 113 49.6
vmacro02389 Vaccinium macrocarpon HOM05D006547 ORTHO05D008112 7.0e-16 87.8 101 53.5
Gohir.A01G157750 Gossypium hirsutum HOM05D006547 ORTHO05D008112 1.6e-15 86.7 138 42.8
Lalb_Chr02g0141791 Lupinus albus HOM05D006547 ORTHO05D008112 1.6e-15 86.7 139 44.6
PGSC0003DMG400009058 Solanum tuberosum HOM05D006547 ORTHO05D008112 1.6e-15 86.7 113 46.9
PGSC0003DMG401007298 Solanum tuberosum HOM05D006547 ORTHO05D008112 1.6e-15 86.7 90 56.7
FAN26G3307 Fragaria x ananassa HOM05D006547 ORTHO05D008112 2.0e-15 86.3 146 41.8
Peaxi162Scf00058g00236 Petunia axillaris HOM05D006547 ORTHO05D008112 2.0e-15 86.3 60 68.3
TWI18G0834 Tripterygium wilfordii HOM05D006547 ORTHO05D008112 3.5e-15 85.5 136 45.6
FvH4_1g26990 Fragaria vesca HOM05D006547 ORTHO05D008112 4.6e-15 85.1 147 40.8
FAN19G2346 Fragaria x ananassa HOM05D006547 ORTHO05D008112 4.6e-15 85.1 147 40.8
VMungo0720G0102 Vigna mungo HOM05D006547 ORTHO05D008112 4.6e-15 85.1 83 60.2
BraA05t19055Z Brassica rapa HOM05D006547 ORTHO05D008112 6.0e-15 84.7 118 44.9
FAN23G3047 Fragaria x ananassa HOM05D006547 ORTHO05D008112 7.8e-15 84.3 147 40.8
Carub.0004s3001 Capsella rubella HOM05D006547 ORTHO05D008112 1.0e-14 84.0 98 51.0
FAN28G2331 Fragaria x ananassa HOM05D006547 ORTHO05D008112 1.0e-14 84.0 149 40.3
Dinv10120 Davidia involucrata HOM05D006547 ORTHO05D008112 1.7e-14 83.2 105 55.2
AL302U10010 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 3.0e-14 82.4 97 50.5
AL4G46840 Arabidopsis lyrata HOM05D006547 ORTHO05D008112 3.0e-14 82.4 97 50.5
AT2G47270 Arabidopsis thaliana HOM05D006547 ORTHO05D008112 3.0e-14 82.4 97 50.5
A05p00570 Brassica napus HOM05D006547 ORTHO05D008112 3.0e-14 82.4 98 49.0
CARHR142670 Cardamine hirsuta HOM05D006547 ORTHO05D008112 3.9e-14 82.0 97 50.5
BolC4t21695H Brassica oleracea HOM05D006547 ORTHO05D008112 5.0e-14 81.6 98 49.0
Rhsim13G0003400 Rhododendron simsii HOM05D006547 ORTHO05D008112 6.6e-14 81.3 77 62.3
RcHm_v2.0_Chr3g0487231 Rosa chinensis HOM05D006547 ORTHO05D008112 8.6e-14 80.9 142 40.8
Solyc06g009510.1 Solanum lycopersicum HOM05D006547 ORTHO05D008112 8.6e-14 80.9 92 52.2
Sopen06g004170 Solanum pennellii HOM05D006547 ORTHO05D008112 1.1e-13 80.5 92 52.2
DCAR_005744 Daucus carota HOM05D006547 ORTHO05D008112 1.5e-13 80.1 75 58.7
Medtr1g096530 Medicago truncatula HOM05D006547 ORTHO05D008112 1.5e-13 80.1 114 47.4
Nitab4.5_0007407g0060 Nicotiana tabacum HOM05D006547 ORTHO05D008112 1.5e-13 80.1 63 66.7
Sp4g29240 Schrenkiella parvula HOM05D006547 ORTHO05D008112 1.5e-13 80.1 97 48.5
C04p00620 Brassica napus HOM05D006547 ORTHO05D008112 1.9e-13 79.7 98 48.0
Thhalv10001736m.g Eutrema salsugineum HOM05D006547 ORTHO05D008112 1.9e-13 79.7 72 58.3
ATR0693G012 Amborella trichopoda HOM05D006547 ORTHO05D008112 2.5e-13 79.3 137 43.8
BcaB02g08786 Brassica carinata HOM05D006547 ORTHO05D008112 2.5e-13 79.3 69 59.4
Prupe.3G008700 Prunus persica HOM05D006547 ORTHO05D008112 2.5e-13 79.3 141 44.0
BcaC01g05038 Brassica carinata HOM05D006547 ORTHO05D008112 3.3e-13 79.0 72 56.9
C03p30880 Brassica napus HOM05D006547 ORTHO05D008112 3.3e-13 79.0 72 56.9
BolC3t15440H Brassica oleracea HOM05D006547 ORTHO05D008112 3.3e-13 79.0 72 56.9
Migut.D00065 Erythranthe guttata HOM05D006547 ORTHO05D008112 4.3e-13 78.6 111 47.7
Nn3g21744 Nelumbo nucifera HOM05D006547 ORTHO05D008112 5.6e-13 78.2 141 44.7
BcaB01g03174 Brassica carinata HOM05D006547 ORTHO05D008112 9.5e-13 77.4 97 47.4
Oeu044737.1 Olea europaea HOM05D006547 ORTHO05D008112 9.5e-13 77.4 111 45.0
arahy.Tifrunner.gnm1.ann1.BQK7VT Arachis hypogaea HOM05D006547 ORTHO05D008112 2.1e-12 76.3 139 41.7
Ciclev10006764m.g Citrus clementina HOM05D006547 ORTHO05D008112 2.8e-12 75.9 69 56.5
SalBow3G4324 Salvia bowleyana HOM05D006547 ORTHO05D008112 4.7e-12 75.1 69 56.5
MSTRG.21702 Avicennia marina HOM05D006547 ORTHO05D008112 1.1e-11 73.9 77 49.4
HanXRQChr15g0465071 Helianthus annuus HOM05D006547 ORTHO05D008112 2.3e-11 72.8 66 65.2
BcaB06g29454 Brassica carinata HOM05D006547 ORTHO05D008112 3.1e-11 72.4 98 44.9
A04p34890 Brassica napus HOM05D006547 ORTHO05D008112 3.1e-11 72.4 98 43.9
BraSC79t46680Z Brassica rapa HOM05D006547 ORTHO05D008112 3.1e-11 72.4 98 43.9
DCAR_012331 Daucus carota HOM05D006547 ORTHO05D008112 3.1e-11 72.4 91 49.5
Lsat_1_v5_gn_9_4661 Lactuca sativa HOM05D006547 ORTHO05D008112 3.1e-11 72.4 120 42.5
Aa31LG1G28590 Aethionema arabicum HOM05D006547 ORTHO05D008112 4.0e-11 72.0 99 49.5
Hma1.2p1_0408F.1_g146550 Hydrangea macrophylla HOM05D006547 ORTHO05D008112 6.8e-11 71.2 83 50.6
Actinidia25863 Actinidia chinensis HOM05D006547 ORTHO05D008112 8.9e-11 70.9 113 43.4
MD09G1285300 Malus domestica HOM05D006547 ORTHO05D008112 8.9e-11 70.9 140 37.9
ECA247G3592 Erigeron canadensis HOM05D006547 ORTHO05D008112 1.5e-10 70.1 156 41.7
MD17G1278000 Malus domestica HOM05D006547 ORTHO05D008112 1.5e-10 70.1 140 36.4
Nitab4.5_0000222g0070 Nicotiana tabacum HOM05D006547 ORTHO05D008112 2.6e-10 69.3 62 66.1
DCAR_018278 Daucus carota HOM05D006547 ORTHO05D008112 3.4e-10 68.9 96 45.8
SGA_v2.0_scaffold376G50290 Striga asiatica HOM05D006547 ORTHO05D008112 3.4e-10 68.9 113 44.2
Sc17g0000340 Simmondsia chinensis HOM05D006547 ORTHO05D008112 5.8e-10 68.2 134 39.6
CsaV3_3G026610 Cucumis sativus L. HOM05D006547 ORTHO05D008112 7.5e-10 67.8 52 61.5
SGA_v2.0_scaffold334G49085 Striga asiatica HOM05D006547 ORTHO05D008112 9.8e-10 67.4 75 53.3
C04p72660 Brassica napus HOM05D006547 ORTHO05D008112 1.3e-09 67.0 98 41.8
CANSAT25G1528 Cannabis sativa HOM05D006547 ORTHO05D008112 1.7e-09 66.6 51 68.6
EL10As5g23562 Beta vulgaris HOM05D006547 ORTHO05D008112 2.2e-09 66.2 75 49.3
MELO3C012934.2 Cucumis melo HOM05D006547 ORTHO05D008112 2.2e-09 66.2 52 57.7
ClCG10G011560 Citrullus lanatus HOM05D006547 ORTHO05D008112 6.4e-09 64.7 52 53.8
Sed0017392 Sechium edule HOM05D006547 ORTHO05D008112 6.4e-09 64.7 81 42.0
THA.LOC104817451 Tarenaya hassleriana HOM05D006547 ORTHO05D008112 8.3e-09 64.3 53 64.2
HanXRQChr10g0285031 Helianthus annuus HOM05D006547 ORTHO05D008112 7.1e-08 61.2 118 36.4
Sc05g0000320 Simmondsia chinensis HOM05D006547 ORTHO05D008112 1.7e-06 56.6 98 39.8
Gohir.A04G137350 Gossypium hirsutum HOM05D034510 ORTHO05D008112 2.3e-06 56.2 55 47.3


User provided reference genes

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