Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 5.4e-153 544.3 273 100.0
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 3.6e-96 355.5 279 66.3
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 1.2e-94 350.5 279 65.6
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 4.1e-92 342.0 249 73.1
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 1.4e-84 317.0 276 60.5
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 3.5e-83 312.4 281 61.2
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 4.5e-83 312.0 262 61.5
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 5.9e-83 311.6 272 63.2
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 1.9e-81 306.6 260 61.2
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.5e-81 306.2 276 60.1
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 4.2e-81 305.4 286 60.1
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 9.5e-81 304.3 269 58.7
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 1.2e-80 303.9 276 59.4
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 1.2e-80 303.9 208 69.2
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 4.7e-80 302.0 263 60.1
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 1.8e-79 300.1 242 64.0
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 3.0e-79 299.3 246 62.6
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 3.0e-79 299.3 288 57.6
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 5.2e-79 298.5 279 56.3
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 1.5e-78 297.0 207 70.0
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 2.0e-78 296.6 275 57.5
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 4.4e-78 295.4 272 58.5
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 4.4e-78 295.4 276 57.6
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 1.3e-77 293.9 298 55.4
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 1.3e-77 293.9 208 67.3
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 2.8e-77 292.7 234 62.8
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 3.7e-77 292.4 215 63.3
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 6.3e-77 291.6 227 62.6
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 1.1e-76 290.8 267 56.6
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 1.1e-76 290.8 266 58.3
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 1.4e-76 290.4 275 56.0
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 1.4e-76 290.4 294 55.4
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 1.4e-76 290.4 280 58.2
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 9.2e-76 287.7 231 62.8
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 9.2e-76 287.7 209 63.2
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 9.2e-76 287.7 209 63.6
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 1.2e-75 287.3 231 62.8
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 1.2e-75 287.3 275 57.1
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 1.2e-75 287.3 275 55.6
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 2.7e-75 286.2 211 66.4
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 4.5e-75 285.4 209 62.7
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 4.5e-75 285.4 209 62.7
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 5.9e-75 285.0 282 55.7
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 5.9e-75 285.0 251 59.4
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 7.8e-75 284.6 266 55.3
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 1.3e-74 283.9 264 56.8
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 1.3e-74 283.9 231 61.0
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 1.7e-74 283.5 175 76.0
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 3.9e-74 282.3 266 56.0
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 8.6e-74 281.2 198 67.2
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 8.6e-74 281.2 251 59.0
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 5.6e-73 278.5 234 65.0
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 9.5e-73 277.7 275 56.0
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 1.6e-72 276.9 230 61.3
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 1.6e-72 276.9 204 66.7
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 2.1e-72 276.6 277 52.7
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 2.8e-72 276.2 255 56.1
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 3.6e-72 275.8 257 54.9
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 4.7e-72 275.4 253 57.3
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 4.7e-72 275.4 265 56.2
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 6.1e-72 275.0 236 61.4
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 8.0e-72 274.6 225 61.3
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 2.3e-71 273.1 204 67.2
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 8.9e-71 271.2 200 65.0
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 5.8e-70 268.5 202 62.4
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 9.8e-70 267.7 187 70.6
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.7e-69 266.9 252 54.8
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 3.7e-69 265.8 264 54.5
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 3.7e-69 265.8 216 63.0
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 6.4e-69 265.0 247 57.9
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 1.9e-68 263.5 239 57.7
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 2.4e-68 263.1 258 54.7
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 9.2e-68 261.2 213 58.7
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 4.6e-67 258.8 199 60.3
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 5.0e-66 255.4 251 53.0
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 1.1e-65 254.2 243 54.3
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 3.3e-65 252.7 201 61.2
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 5.6e-65 251.9 214 57.0
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 1.2e-64 250.8 212 57.1
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 8.0e-64 248.1 233 52.4
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 2.3e-63 246.5 206 57.8
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 3.1e-63 246.1 273 50.5
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 1.5e-62 243.8 252 53.6
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 7.5e-62 241.5 210 54.8
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 8.3e-61 238.0 184 65.8
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 1.1e-60 237.7 239 56.1
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 3.2e-60 236.1 246 57.3
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 4.1e-60 235.7 171 67.3
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 1.6e-59 233.8 215 55.3
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 6.6e-58 228.4 202 55.4
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 1.1e-57 227.6 192 55.7
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 4.3e-57 225.7 235 49.4
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 3.6e-56 222.6 240 51.7
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.1e-55 221.1 265 47.9
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 5.8e-54 215.3 252 49.2
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 3.7e-53 212.6 246 53.7
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 6.0e-51 205.3 230 49.6
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 2.8e-48 196.4 164 60.4
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 4.7e-48 195.7 227 44.5
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 1.4e-47 194.1 246 44.7
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.4e-44 184.1 294 45.2
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 3.2e-44 183.0 239 40.6
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 9.6e-41 171.4 137 65.0
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.6e-40 170.6 322 41.6
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 4.8e-40 169.1 228 38.6
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 9.0e-39 164.9 182 51.6
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 7.6e-38 161.8 120 65.0
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 1.7e-37 160.6 206 42.2
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 2.2e-37 160.2 216 41.2
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 1.2e-35 154.5 164 46.3
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 7.8e-35 151.8 253 41.5
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 1.0e-34 151.4 88 77.3
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 2.3e-34 150.2 90 75.6
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 5.1e-34 149.1 90 75.6
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 9.6e-33 144.8 292 34.2
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 4.8e-32 142.5 120 58.3
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 2.4e-31 140.2 197 44.2
CSS0048231 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.0e-30 137.1 99 66.7
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 1.7e-29 134.0 160 50.0
Actinidia27187 Actinidia chinensis HOM05D006222 ORTHO05D007677 3.9e-26 122.9 211 43.6
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 1.5e-25 120.9 101 59.4
Ah.12g060290 Amaranthus hybridus HOM05D006222 ORTHO05D007677 4.6e-19 99.4 61 73.8
A03p23980 Brassica napus HOM05D006222 ORTHO05D007677 4.6e-11 72.8 52 61.5
AagrBONN_evm.TU.Sc2ySwM_362.227 Anthoceros agrestis HOM05D006222 ORTHO05D007677 6.1e-11 72.4 186 30.1
SEGI_30148 Sequoiadendron giganteum HOM05D006222 ORTHO05D007677 8.2e-08 62.0 51 56.9
BcaC01g05263 Brassica carinata HOM05D006222 ORTHO05D007677 7.7e-06 55.5 43 62.8


User provided reference genes

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