Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G1087 Trochodendron aralioides HOM05D006625 ORTHO05D008060 3.0e-156 555.1 266 100.0
Dinv40271 Davidia involucrata HOM05D006625 ORTHO05D008060 1.3e-103 380.2 264 68.6
Cfa006572 Carpinus fangiana HOM05D006625 ORTHO05D008060 5.0e-103 378.3 267 67.4
Nn4g26222 Nelumbo nucifera HOM05D006625 ORTHO05D008060 2.0e-99 366.3 266 63.5
GSVIVG01000035001 Vitis vinifera HOM05D006625 ORTHO05D008060 5.7e-99 364.8 271 65.7
Actinidia19797 Actinidia chinensis HOM05D006625 ORTHO05D008060 1.4e-97 360.1 263 65.0
QL03p005837 Quercus lobata HOM05D006625 ORTHO05D008060 3.5e-96 355.5 271 63.1
Potri.005G035600 Populus trichocarpa HOM05D006625 ORTHO05D008060 4.6e-96 355.1 259 64.1
Ciclev10002145m.g Citrus clementina HOM05D006625 ORTHO05D008060 1.0e-95 354.0 264 64.4
CSS0023168 Camellia sinensis var. sinensis HOM05D006625 ORTHO05D008060 1.3e-95 353.6 265 63.8
Hma1.2p1_0617F.1_g190230 Hydrangea macrophylla HOM05D006625 ORTHO05D008060 5.6e-94 348.2 266 63.5
Prupe.6G327800 Prunus persica HOM05D006625 ORTHO05D008060 1.6e-93 346.7 259 64.5
CiPaw.07G016100 Carya illinoinensis HOM05D006625 ORTHO05D008060 1.1e-92 344.0 268 62.7
Manes.09G165400 Manihot esculenta HOM05D006625 ORTHO05D008060 2.6e-91 339.3 259 63.3
Cc00_g15580 Coffea canephora HOM05D006625 ORTHO05D008060 4.4e-91 338.6 252 62.3
vmacro19631 Vaccinium macrocarpon HOM05D006625 ORTHO05D008060 1.3e-90 337.0 261 62.8
Duzib106G0694 Durio zibethinus HOM05D006625 ORTHO05D008060 2.9e-90 335.9 267 59.6
Aqoxy2G03295 Aquilegia oxysepala HOM05D006625 ORTHO05D008060 3.7e-90 335.5 260 58.8
CANSAT54G0428 Cannabis sativa HOM05D006625 ORTHO05D008060 9.2e-89 330.9 262 59.5
Cpa.g.sc48.33 Carica papaya HOM05D006625 ORTHO05D008060 9.2e-89 330.9 262 59.5
Sopen01g042370 Solanum pennellii HOM05D006625 ORTHO05D008060 9.2e-89 330.9 261 60.9
PGSC0003DMG400028585 Solanum tuberosum HOM05D006625 ORTHO05D008060 1.2e-88 330.5 261 60.2
Hund07059 Selenicereus undatus HOM05D006625 ORTHO05D008060 1.6e-88 330.1 267 57.3
FAN05G0213 Fragaria x ananassa HOM05D001310 ORTHO05D008060 2.0e-88 329.7 259 62.2
RcHm_v2.0_Chr3g0454381 Rosa chinensis HOM05D006625 ORTHO05D008060 3.5e-88 328.9 259 61.8
Solyc01g098830.3 Solanum lycopersicum HOM05D006625 ORTHO05D008060 4.6e-88 328.6 261 60.9
Glyma.20G232800 Glycine max HOM05D006625 ORTHO05D008060 1.0e-87 327.4 254 61.0
FvH4_6g05630 Fragaria vesca HOM05D006625 ORTHO05D008060 2.3e-87 326.2 259 61.0
Nitab4.5_0005388g0010 Nicotiana tabacum HOM05D006625 ORTHO05D008060 2.3e-87 326.2 262 58.4
FAN14G5181 Fragaria x ananassa HOM05D001310 ORTHO05D008060 3.0e-87 325.9 259 61.4
FAN14G5649 Fragaria x ananassa HOM05D001310 ORTHO05D008060 3.9e-87 325.5 259 61.4
Thecc.05G305300 Theobroma cacao HOM05D006625 ORTHO05D008060 5.0e-87 325.1 264 58.0
arahy.Tifrunner.gnm1.ann1.A4Z4CH Arachis hypogaea HOM05D006625 ORTHO05D008060 2.5e-86 322.8 260 58.5
FAN09G2049 Fragaria x ananassa HOM05D001310 ORTHO05D008060 2.5e-86 322.8 259 60.6
arahy.Tifrunner.gnm1.ann1.P1SK02 Arachis hypogaea HOM05D006625 ORTHO05D008060 3.3e-86 322.4 260 58.5
COL.COLO4_13497 Corchorus olitorius HOM05D006625 ORTHO05D008060 3.3e-86 322.4 264 57.6
Sabra05G0036200 Salix brachista HOM05D006625 ORTHO05D008060 1.2e-85 320.5 277 55.6
DCAR_029427 Daucus carota HOM05D006625 ORTHO05D008060 2.1e-85 319.7 259 57.5
Glyma.10G155500 Glycine max HOM05D006625 ORTHO05D008060 2.1e-85 319.7 254 58.7
ClCG02G015910 Citrullus lanatus HOM05D006625 ORTHO05D008060 2.8e-85 319.3 269 56.5
CsaV3_2G005130 Cucumis sativus L. HOM05D006625 ORTHO05D008060 4.7e-85 318.5 267 55.8
MD04G1207100 Malus domestica HOM05D006625 ORTHO05D008060 1.4e-84 317.0 260 59.6
Lj5g0018133 Lotus japonicus HOM05D006625 ORTHO05D008060 2.3e-84 316.2 260 58.5
Nitab4.5_0002031g0060 Nicotiana tabacum HOM05D006625 ORTHO05D008060 6.8e-84 314.7 275 55.6
Ca_10103_v3 Cicer arietinum L. HOM05D006625 ORTHO05D008060 2.0e-83 313.2 256 57.8
Lalb_Chr21g0310751 Lupinus albus HOM05D006625 ORTHO05D008060 2.0e-83 313.2 258 58.1
PSO339G1258 Papaver somniferum HOM05D006625 ORTHO05D008060 2.6e-83 312.8 273 57.1
Peaxi162Scf00037g00234 Petunia axillaris HOM05D006625 ORTHO05D008060 4.4e-83 312.0 271 56.5
Sc16g0008430 Simmondsia chinensis HOM05D006625 ORTHO05D008060 4.4e-83 312.0 262 56.5
THA.LOC104821879 Tarenaya hassleriana HOM05D006625 ORTHO05D008060 4.4e-83 312.0 254 55.1
Psat6g149480 Pisum sativum HOM05D006625 ORTHO05D008060 7.5e-83 311.2 258 57.0
Gohir.D11G000400 Gossypium hirsutum HOM05D006625 ORTHO05D008060 1.3e-82 310.5 265 56.2
Gorai.007G001300 Gossypium raimondii HOM05D006625 ORTHO05D008060 2.9e-82 309.3 265 56.2
Lsat_1_v5_gn_2_64300 Lactuca sativa HOM05D006625 ORTHO05D008060 1.9e-81 306.6 266 56.8
TWI56G0867 Tripterygium wilfordii HOM05D006625 ORTHO05D008060 4.1e-81 305.4 246 56.9
PGR031G0551 Punica granatum HOM05D006625 ORTHO05D008060 1.2e-80 303.9 261 56.7
Aa31LG5G15780 Aethionema arabicum HOM05D006625 ORTHO05D008060 1.3e-79 300.4 267 51.7
Haze_04209 Corylus avellana HOM05D006625 ORTHO05D008060 3.0e-79 299.3 237 62.0
TPR.G6108 Trifolium pratense HOM05D006625 ORTHO05D008060 5.1e-79 298.5 259 55.6
Rhsim05G0143100 Rhododendron simsii HOM05D006625 ORTHO05D008060 6.6e-79 298.1 234 62.0
Medtr1g082740 Medicago truncatula HOM05D006625 ORTHO05D008060 8.6e-79 297.7 266 56.0
Phvul.007G181000 Phaseolus vulgaris HOM05D006625 ORTHO05D008060 1.1e-78 297.4 258 55.0
Eucgr.H04479 Eucalyptus grandis HOM05D006625 ORTHO05D008060 1.5e-78 297.0 247 56.7
MSTRG.28006 Avicennia marina HOM05D006625 ORTHO05D008060 3.3e-78 295.8 256 56.6
VMungo0720G0027 Vigna mungo HOM05D006625 ORTHO05D008060 7.3e-78 294.7 275 52.4
HanXRQChr10g0295051 Helianthus annuus HOM05D006625 ORTHO05D008060 9.5e-78 294.3 263 54.4
ECA238G3785 Erigeron canadensis HOM05D006625 ORTHO05D008060 2.8e-77 292.7 265 54.7
EL10Ac4g09338 Beta vulgaris HOM05D006625 ORTHO05D008060 5.2e-76 288.5 257 53.7
BcaC05g30013 Brassica carinata HOM05D006625 ORTHO05D008060 2.0e-75 286.6 263 52.9
FAN02G3749 Fragaria x ananassa HOM05D006625 ORTHO05D008060 2.0e-75 286.6 248 58.5
Carub.0003s0450 Capsella rubella HOM05D006625 ORTHO05D008060 4.4e-75 285.4 261 51.0
Thhalv10021312m.g Eutrema salsugineum HOM05D006625 ORTHO05D008060 4.4e-75 285.4 267 50.6
C05p61940 Brassica napus HOM05D006625 ORTHO05D008060 1.7e-74 283.5 264 51.9
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 2.2e-74 283.1 253 53.0
BolC5t34854H Brassica oleracea HOM05D006625 ORTHO05D008060 1.1e-73 280.8 264 51.5
Lj5A588T21 Lonicera japonica HOM05D006625 ORTHO05D008060 1.9e-73 280.0 240 58.8
BcaC05g30142 Brassica carinata HOM05D006625 ORTHO05D008060 7.1e-73 278.1 264 51.5
AL3G15690 Arabidopsis lyrata HOM05D006625 ORTHO05D008060 1.6e-72 276.9 268 49.6
Lj5A576T32 Lonicera japonica HOM05D006625 ORTHO05D008060 1.6e-72 276.9 240 57.9
Lj5A9T24 Lonicera japonica HOM05D006625 ORTHO05D008060 1.6e-72 276.9 241 58.5
Sed0016985 Sechium edule HOM05D006625 ORTHO05D008060 2.1e-72 276.6 269 51.7
BraA05t23018Z Brassica rapa HOM05D006625 ORTHO05D008060 2.7e-72 276.2 262 50.8
Lj5A588T22 Lonicera japonica HOM05D006625 ORTHO05D008060 2.7e-72 276.2 240 57.5
A05p42330 Brassica napus HOM05D006625 ORTHO05D008060 6.0e-72 275.0 262 50.4
Oeu043355.5 Olea europaea HOM05D006625 ORTHO05D008060 1.3e-71 273.9 234 55.1
SGA_v2.0_scaffold81G26083 Striga asiatica HOM05D006625 ORTHO05D008060 3.0e-71 272.7 265 52.5
PSO801G0350 Papaver somniferum HOM05D000048 ORTHO05D000207 1.9e-70 270.0 210 60.0
TWI77G0294 Tripterygium wilfordii HOM05D006625 ORTHO05D008060 3.3e-70 269.2 218 58.3
Gohir.A11G000800 Gossypium hirsutum HOM05D006625 ORTHO05D008060 7.3e-70 268.1 232 56.0
Sp3g04100 Schrenkiella parvula HOM05D006625 ORTHO05D008060 7.3e-70 268.1 270 47.8
ATR0626G410 Amborella trichopoda HOM05D006625 ORTHO05D008060 2.8e-69 266.2 257 50.2
Lj5A11T18 Lonicera japonica HOM05D006625 ORTHO05D008060 1.4e-68 263.8 235 57.4
CDE11G1261 Ceratophyllum demersum HOM05D006625 ORTHO05D008060 2.4e-68 263.1 251 50.2
Migut.N01952 Erythranthe guttata HOM05D006625 ORTHO05D008060 4.0e-68 262.3 253 51.4
CiPaw.07G016300 Carya illinoinensis HOM05D006625 ORTHO05D008060 2.7e-64 249.6 241 54.8
Rhsim05G0144100 Rhododendron simsii HOM05D006625 ORTHO05D008060 3.0e-63 246.1 260 50.4
QL03p006436 Quercus lobata HOM05D006625 ORTHO05D008060 5.1e-63 245.4 162 66.7
MELO3C004279.2 Cucumis melo HOM05D006625 ORTHO05D008060 1.6e-61 240.4 168 60.7
Zm00001eb212380 Zea mays HOM05D006625 ORTHO05D008060 1.1e-60 237.7 218 54.6
MBI19_g05826_MAGBIO Magnolia biondii HOM05D006625 ORTHO05D008060 5.8e-51 205.3 222 53.6
unitig_578.g16758 Utricularia gibba HOM05D004142 ORTHO05D005411 2.2e-50 203.4 251 40.6
AT3G05250 Arabidopsis thaliana HOM05D006625 ORTHO05D008060 4.6e-48 195.7 208 47.1
AUR62005130 Chenopodium quinoa HOM05D006625 ORTHO05D008060 3.9e-47 192.6 175 56.0
COL.COLO4_10909 Corchorus olitorius HOM05D006625 ORTHO05D008060 5.6e-46 188.7 246 43.9
CARHR079590 Cardamine hirsuta HOM05D006625 ORTHO05D008060 3.7e-45 186.0 168 50.6
AUR62000843 Chenopodium quinoa HOM05D006625 ORTHO05D008060 1.8e-39 167.2 248 40.7
SEGI_37357 Sequoiadendron giganteum HOM05D006625 ORTHO05D008060 2.3e-39 166.8 196 42.9
Mapoly0224s0007 Marchantia polymorpha HOM05D006625 ORTHO05D008060 1.3e-37 161.0 221 41.2
AagrBONN_evm.TU.Sc2ySwM_362.2578 Anthoceros agrestis HOM05D006625 ORTHO05D008060 9.0e-36 154.8 226 37.6
MD12G1221000 Malus domestica HOM05D006625 ORTHO05D008060 1.4e-33 147.5 142 55.6
Lj5A1T20 Lonicera japonica HOM05D006625 ORTHO05D008060 3.6e-32 142.9 240 37.9
Atru.chr2.446 Acer truncatum HOM05D000091 ORTHO05D009985 6.1e-32 142.1 91 67.0
Os03g0809800 Oryza sativa ssp. japonica HOM05D006625 ORTHO05D008060 1.1e-30 137.9 163 47.9
Lj5A1T18 Lonicera japonica HOM05D006625 ORTHO05D008060 7.4e-30 135.2 242 37.2
Pp3c3_27350 Physcomitrium patens HOM05D006625 ORTHO05D008060 3.7e-29 132.9 253 32.4
BolC3t17028H Brassica oleracea HOM05D006625 ORTHO05D008060 1.0e-26 124.8 224 32.6
MBI19_g05827_MAGBIO Magnolia biondii HOM05D006625 ORTHO05D008060 2.3e-23 113.6 97 60.8
FAN05G4155 Fragaria x ananassa HOM05D001310 ORTHO05D001283 1.7e-21 107.5 115 50.4
Lj5A11T17 Lonicera japonica HOM05D006625 ORTHO05D008060 6.3e-21 105.5 130 48.5
Hma1.2p1_0617F.1_g190240 Hydrangea macrophylla HOM05D006625 ORTHO05D008060 5.3e-20 102.4 102 54.9
Lj5A18T33 Lonicera japonica HOM05D006625 ORTHO05D008060 1.8e-15 87.4 108 46.3
Lj5A10T21 Lonicera japonica HOM05D006625 ORTHO05D008060 5.2e-15 85.9 110 47.3
MD12G1221200 Malus domestica HOM05D006625 ORTHO05D008060 1.5e-14 84.3 57 68.4
Cre03.g200651 Chlamydomonas reinhardtii HOM05D006625 ORTHO05D008060 2.8e-13 80.1 300 23.7
HPP92_025561 Vanilla planifolia HOM05D006625 ORTHO05D008060 3.5e-11 73.2 59 57.6
CBR_g7977 Chara braunii HOM05D006625 ORTHO05D008060 3.2e-09 66.6 125 36.0
Lsat_1_v5_gn_5_52881 Lactuca sativa HOM05D007775 ORTHO05D009858 4.7e-08 62.8 270 22.2
PGR031G0649 Punica granatum HOM05D007775 ORTHO05D009858 2.6e-06 57.0 269 23.4
BraA04t18439Z Brassica rapa HOM05D007775 ORTHO05D009858 9.7e-06 55.1 266 22.2


User provided reference genes

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