Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G1052 Trochodendron aralioides HOM05D004131 ORTHO05D004778 3.2e-54 215.7 111 100.0
TAR636G2398 Trochodendron aralioides HOM05D004131 ORTHO05D004778 4.5e-48 195.3 111 88.3
Aqoxy2G04165 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 1.7e-47 193.4 111 87.4
GSVIVG01038193001 Vitis vinifera HOM05D004131 ORTHO05D004778 2.3e-47 193.0 111 88.3
Atru.chr4.1513 Acer truncatum HOM05D004131 ORTHO05D004778 1.1e-46 190.7 111 87.4
Dinv33225 Davidia involucrata HOM05D004131 ORTHO05D004778 1.1e-46 190.7 111 85.6
TWI38G2196 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 1.1e-46 190.7 111 86.5
FvH4_1g00470 Fragaria vesca HOM05D004131 ORTHO05D004778 3.3e-46 189.1 111 86.5
TWI63G0908 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 3.3e-46 189.1 111 84.7
Gorai.011G132700 Gossypium raimondii HOM05D004131 ORTHO05D004778 4.2e-46 188.7 111 86.5
Cfa021469 Carpinus fangiana HOM05D004131 ORTHO05D004778 5.5e-46 188.3 111 85.6
Nn7g37517 Nelumbo nucifera HOM05D004131 ORTHO05D004778 5.5e-46 188.3 113 87.6
FAN28G1052 Fragaria x ananassa HOM05D004131 ORTHO05D004778 7.2e-46 188.0 111 86.5
Gohir.A10G146200 Gossypium hirsutum HOM05D004131 ORTHO05D004778 9.5e-46 187.6 111 85.6
Gohir.D10G120800 Gossypium hirsutum HOM05D004131 ORTHO05D004778 9.5e-46 187.6 111 85.6
Dinv18309 Davidia involucrata HOM05D004131 ORTHO05D004778 1.6e-45 186.8 111 84.7
Ciclev10022332m.g Citrus clementina HOM05D004131 ORTHO05D004778 2.8e-45 186.0 111 85.6
Duzib268G1863 Durio zibethinus HOM05D004131 ORTHO05D004778 2.8e-45 186.0 111 84.7
Sabra07G0113200 Salix brachista HOM05D004131 ORTHO05D004778 3.6e-45 185.7 111 83.8
Sabra07G0117600 Salix brachista HOM05D004131 ORTHO05D004778 3.6e-45 185.7 111 83.8
Potri.007G139900 Populus trichocarpa HOM05D004131 ORTHO05D004778 4.7e-45 185.3 111 83.8
Ca_18622_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 6.1e-45 184.9 111 84.7
Ca_18628_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 6.1e-45 184.9 111 84.7
Haze_11173 Corylus avellana HOM05D004131 ORTHO05D004778 6.1e-45 184.9 113 85.0
Haze_11178 Corylus avellana HOM05D004131 ORTHO05D004778 6.1e-45 184.9 113 85.0
Migut.N03052 Erythranthe guttata HOM05D004131 ORTHO05D004778 8.0e-45 184.5 111 82.9
PSO675G2278 Papaver somniferum HOM05D004131 ORTHO05D004778 1.0e-44 184.1 112 84.8
Migut.G00833 Erythranthe guttata HOM05D004131 ORTHO05D004778 1.8e-44 183.3 111 83.8
Glyma.07G206100 Glycine max HOM05D004131 ORTHO05D004778 1.8e-44 183.3 111 84.7
CSS0004184 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 2.3e-44 183.0 111 82.9
CSS0028329 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 2.3e-44 183.0 111 82.9
ECA130G0002 Erigeron canadensis HOM05D004131 ORTHO05D004778 2.3e-44 183.0 111 81.1
Duzib212G0438 Durio zibethinus HOM05D004131 ORTHO05D004778 3.0e-44 182.6 111 82.9
Potri.017G010100 Populus trichocarpa HOM05D004131 ORTHO05D004778 3.0e-44 182.6 111 82.9
FAN26G1335 Fragaria x ananassa HOM05D004131 ORTHO05D004778 4.0e-44 182.2 109 85.3
RcHm_v2.0_Chr2g0084981 Rosa chinensis HOM05D004131 ORTHO05D004778 4.0e-44 182.2 107 87.9
unitig_8.g3637 Utricularia gibba HOM05D004131 ORTHO05D004778 4.0e-44 182.2 111 83.8
ATR0743G176 Amborella trichopoda HOM05D004131 ORTHO05D004778 5.2e-44 181.8 110 84.5
MSTRG.24561 Avicennia marina HOM05D004131 ORTHO05D004778 5.2e-44 181.8 111 83.8
MD02G1003900 Malus domestica HOM05D004131 ORTHO05D004778 6.8e-44 181.4 111 83.8
Prupe.7G267400 Prunus persica HOM05D004131 ORTHO05D004778 6.8e-44 181.4 118 82.2
FAN23G0024 Fragaria x ananassa HOM05D004131 ORTHO05D004778 1.2e-43 180.6 107 86.0
Manes.01G017500 Manihot esculenta HOM05D004131 ORTHO05D004778 1.2e-43 180.6 111 82.9
MD15G1147200 Malus domestica HOM05D004131 ORTHO05D004778 1.5e-43 180.3 107 86.0
Glyma.02G138900 Glycine max HOM05D004131 ORTHO05D004778 2.0e-43 179.9 111 82.9
Phvul.003G059400 Phaseolus vulgaris HOM05D004131 ORTHO05D004778 2.0e-43 179.9 108 84.3
Lj4g0014155 Lotus japonicus HOM05D004131 ORTHO05D004778 2.6e-43 179.5 111 81.1
TPR.G23549 Trifolium pratense HOM05D004131 ORTHO05D004778 2.6e-43 179.5 108 84.3
Lsat_1_v5_gn_7_67880 Lactuca sativa HOM05D004131 ORTHO05D004778 3.4e-43 179.1 110 80.9
CAN.G448.4 Capsicum annuum HOM05D004131 ORTHO05D004778 5.7e-43 178.3 104 85.6
HanXRQChr02g0059071 Helianthus annuus HOM05D004131 ORTHO05D004778 7.5e-43 177.9 104 85.6
Lalb_Chr16g0384341 Lupinus albus HOM05D004131 ORTHO05D004778 7.5e-43 177.9 111 82.0
MBI07_g36705_MAGBIO Magnolia biondii HOM05D004131 ORTHO05D004778 7.5e-43 177.9 107 86.0
Solyc12g019470.2 Solanum lycopersicum HOM05D004131 ORTHO05D004778 7.5e-43 177.9 109 81.7
Sopen12g009750 Solanum pennellii HOM05D004131 ORTHO05D004778 7.5e-43 177.9 109 81.7
COL.COLO4_04655 Corchorus olitorius HOM05D004131 ORTHO05D004778 9.8e-43 177.6 111 82.0
Medtr4g087630 Medicago truncatula HOM05D004131 ORTHO05D004778 1.3e-42 177.2 108 82.4
Psat7g119160 Pisum sativum HOM05D004131 ORTHO05D004778 1.7e-42 176.8 106 84.9
Actinidia18408 Actinidia chinensis HOM05D004131 ORTHO05D004778 2.2e-42 176.4 111 79.3
ECA233G3286 Erigeron canadensis HOM05D004131 ORTHO05D004778 2.2e-42 176.4 105 82.9
PGSC0003DMG400005367 Solanum tuberosum HOM05D004131 ORTHO05D004778 3.7e-42 175.6 105 83.8
CANSAT56G2001 Cannabis sativa HOM05D004131 ORTHO05D004778 4.9e-42 175.3 102 87.3
PSO017G4173 Papaver somniferum HOM05D004131 ORTHO05D004778 4.9e-42 175.3 107 85.0
THA.LOC104804159 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 6.3e-42 174.9 106 84.0
HPP92_023727 Vanilla planifolia HOM05D004131 ORTHO05D004778 6.3e-42 174.9 110 80.9
CiPaw.01G198800 Carya illinoinensis HOM05D004131 ORTHO05D004778 1.4e-41 173.7 105 84.8
Nitab4.5_0000064g0030 Nicotiana tabacum HOM05D004131 ORTHO05D004778 1.4e-41 173.7 105 81.9
Nitab4.5_0005089g0010 Nicotiana tabacum HOM05D004131 ORTHO05D004778 1.4e-41 173.7 105 81.9
Peaxi162Scf00483g00111 Petunia axillaris HOM05D004131 ORTHO05D004778 1.4e-41 173.7 104 82.7
SalBow3G2571 Salvia bowleyana HOM05D004131 ORTHO05D004778 1.8e-41 173.3 103 84.5
Aa31LG10G14050 Aethionema arabicum HOM05D004131 ORTHO05D004778 2.4e-41 172.9 106 82.1
Ah.13g073340 Amaranthus hybridus HOM05D004131 ORTHO05D004778 2.4e-41 172.9 111 76.6
Lj6C265T11 Lonicera japonica HOM05D004131 ORTHO05D004778 2.4e-41 172.9 111 79.3
CDE08G0022 Ceratophyllum demersum HOM05D004131 ORTHO05D004778 5.4e-41 171.8 111 78.4
Cc03_g14990 Coffea canephora HOM05D004131 ORTHO05D004778 9.2e-41 171.0 111 76.6
Lalb_Chr05g0218801 Lupinus albus HOM05D004131 ORTHO05D004778 1.2e-40 170.6 111 78.4
Actinidia28972 Actinidia chinensis HOM05D004131 ORTHO05D004778 2.0e-40 169.9 103 83.5
Sp4g25870 Schrenkiella parvula HOM05D004131 ORTHO05D004778 3.5e-40 169.1 106 79.2
Thhalv10006256m.g Eutrema salsugineum HOM05D004131 ORTHO05D004778 4.5e-40 168.7 110 77.3
THA.LOC104805841 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 4.5e-40 168.7 106 80.2
MELO3C022231.2 Cucumis melo HOM05D004131 ORTHO05D004778 5.9e-40 168.3 112 77.7
CSS0000211 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 7.8e-40 167.9 103 83.5
CSS0046112 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 7.8e-40 167.9 103 83.5
AL5G41850 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 1.0e-39 167.5 110 76.4
AT3G59800 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 1.3e-39 167.2 106 78.3
CsaV3_5G040580 Cucumis sativus L. HOM05D004131 ORTHO05D004778 1.3e-39 167.2 112 77.7
SalBow6G7192 Salvia bowleyana HOM05D004131 ORTHO05D004778 1.3e-39 167.2 112 78.6
BcaB02g08209 Brassica carinata HOM05D004131 ORTHO05D004778 1.7e-39 166.8 110 76.4
BraA04t15927Z Brassica rapa HOM05D004131 ORTHO05D004778 1.7e-39 166.8 107 77.6
A04p02020 Brassica napus HOM05D004131 ORTHO05D004778 2.9e-39 166.0 110 76.4
Sp5g03340 Schrenkiella parvula HOM05D004131 ORTHO05D004778 2.9e-39 166.0 110 75.5
Sc13g0007290 Simmondsia chinensis HOM05D004131 ORTHO05D004778 2.9e-39 166.0 101 81.2
EL10Ac3g06119 Beta vulgaris HOM05D004131 ORTHO05D004778 3.8e-39 165.6 104 78.8
BcaC02g10087 Brassica carinata HOM05D004131 ORTHO05D004778 5.0e-39 165.2 110 75.5
C04p32910 Brassica napus HOM05D004131 ORTHO05D004778 5.0e-39 165.2 110 75.5
Sabra17G0009400 Salix brachista HOM05D004131 ORTHO05D004778 5.0e-39 165.2 135 66.7
THA.LOC104802336 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 5.0e-39 165.2 105 79.0
BolC4t24854H Brassica oleracea HOM05D004131 ORTHO05D004778 6.6e-39 164.9 107 76.6
Carub.0004s2633 Capsella rubella HOM05D004131 ORTHO05D004778 8.6e-39 164.5 106 77.4
CiPaw.02G123300 Carya illinoinensis HOM05D004131 ORTHO05D004778 8.6e-39 164.5 102 80.4
Hund12374 Selenicereus undatus HOM05D004131 ORTHO05D004778 1.5e-38 163.7 103 78.6
BcaB02g08900 Brassica carinata HOM05D004131 ORTHO05D004778 2.5e-38 162.9 108 76.9
BcaC02g12362 Brassica carinata HOM05D004131 ORTHO05D004778 2.5e-38 162.9 108 76.9
C04p04750 Brassica napus HOM05D004131 ORTHO05D004778 2.5e-38 162.9 108 76.9
BolC4t22105H Brassica oleracea HOM05D004131 ORTHO05D004778 2.5e-38 162.9 108 76.9
CARHR138980 Cardamine hirsuta HOM05D004131 ORTHO05D004778 4.3e-38 162.2 106 76.4
Eucgr.G01598 Eucalyptus grandis HOM05D004131 ORTHO05D004778 4.3e-38 162.2 101 78.2
Eucgr.L00027 Eucalyptus grandis HOM05D004131 ORTHO05D004778 4.3e-38 162.2 101 78.2
Ah.07g202990 Amaranthus hybridus HOM05D004131 ORTHO05D004778 9.5e-38 161.0 102 77.5
Zm00001eb425720 Zea mays HOM05D004131 ORTHO05D004778 1.2e-37 160.6 105 79.0
A05p04000 Brassica napus HOM05D004131 ORTHO05D004778 3.6e-37 159.1 106 76.4
BraA05t19388Z Brassica rapa HOM05D004131 ORTHO05D004778 3.6e-37 159.1 106 76.4
AUR62002422 Chenopodium quinoa HOM05D004131 ORTHO05D004778 1.4e-36 157.1 112 72.3
arahy.Tifrunner.gnm1.ann1.GY80IK Arachis hypogaea HOM05D004131 ORTHO05D004778 1.8e-36 156.8 135 66.7
AUR62023766 Chenopodium quinoa HOM05D004131 ORTHO05D004778 2.3e-36 156.4 112 72.3
Mapoly0055s0100 Marchantia polymorpha HOM05D004131 ORTHO05D004778 2.6e-35 152.9 113 70.8
AagrBONN_evm.TU.Sc2ySwM_344.2765 Anthoceros agrestis HOM05D004131 ORTHO05D004778 2.9e-34 149.4 112 67.9
Lju470A13T20 Lonicera japonica HOM05D004131 ORTHO05D004778 8.3e-34 147.9 188 50.0
Aqoxy604s001 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 1.2e-32 144.1 124 66.9
VMungo0251G3663 Vigna mungo HOM05D004131 ORTHO05D004778 7.8e-32 141.4 81 86.4
SMO364G0381 Selaginella moellendorffii HOM05D004131 ORTHO05D004778 1.0e-31 141.0 111 65.8
vmacro15701 Vaccinium macrocarpon HOM05D004131 ORTHO05D004778 2.3e-31 139.8 165 50.9
Lju470A13G17 Lonicera japonica HOM05D004131 ORTHO05D004778 3.0e-31 139.4 79 88.6
Pp3c3_18840 Physcomitrium patens HOM05D004131 ORTHO05D004778 5.0e-31 138.7 113 64.6
Sed0002263 Sechium edule HOM05D004131 ORTHO05D004778 1.9e-30 136.7 80 85.0
PGR042G3815 Punica granatum HOM05D004131 ORTHO05D004778 9.5e-30 134.4 80 82.5
Rhsim02G0086100 Rhododendron simsii HOM05D004131 ORTHO05D004778 3.1e-28 129.4 191 44.0
Actinidia11437 Actinidia chinensis HOM05D004131 ORTHO05D004778 2.4e-25 119.8 71 81.7
AT2G43795 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 4.1e-25 119.0 76 76.3
AL4G42670 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 7.0e-25 118.2 76 75.0
RhsimUnG0015600 Rhododendron simsii HOM05D004131 ORTHO05D004778 2.7e-24 116.3 225 37.3
SEGI_19170 Sequoiadendron giganteum HOM05D004131 ORTHO05D004778 3.0e-23 112.8 80 68.8
CARHR170140 Cardamine hirsuta HOM05D004131 ORTHO05D004778 5.0e-23 112.1 69 79.7
QL10p058548 Quercus lobata HOM05D004131 ORTHO05D004778 5.0e-23 112.1 65 87.7
QL10p059325 Quercus lobata HOM05D004131 ORTHO05D004778 5.0e-23 112.1 65 87.7
BcaC07g40454 Brassica carinata HOM05D004131 ORTHO05D004778 6.8e-20 101.7 81 66.7
Lj6C255T9 Lonicera japonica HOM05D004131 ORTHO05D004778 5.8e-19 98.6 75 70.7
CBR_g6538 Chara braunii HOM05D004131 ORTHO05D004778 9.9e-19 97.8 72 65.3
Oeu050314.3 Olea europaea HOM05D004131 ORTHO05D004778 2.4e-17 93.2 137 48.2
BraA09t40640Z Brassica rapa HOM05D004131 ORTHO05D004778 3.2e-17 92.8 80 65.0
Cre16.g660850 Chlamydomonas reinhardtii HOM05D004131 ORTHO05D004778 2.7e-16 89.7 102 51.0
BcaB02g08224 Brassica carinata HOM05D004131 ORTHO05D004778 1.0e-15 87.8 62 69.4
ClCG08G000030 Citrullus lanatus HOM05D004131 ORTHO05D004778 1.0e-15 87.8 111 51.4
SGA_v2.0_scaffold37G14924 Striga asiatica HOM05D004131 ORTHO05D004778 1.5e-14 84.0 115 47.0
BcaC07g40508 Brassica carinata HOM05D004131 ORTHO05D004778 3.6e-13 79.3 82 53.7
C08p34760 Brassica napus HOM05D004131 ORTHO05D004778 4.7e-13 79.0 76 56.6
BolC8t51078H Brassica oleracea HOM05D004131 ORTHO05D004778 4.7e-13 79.0 76 56.6
Thecc.04G162100 Theobroma cacao HOM05D004131 ORTHO05D004778 4.7e-13 79.0 51 86.3
QL10p058544 Quercus lobata HOM05D004131 ORTHO05D004778 1.1e-12 77.8 48 81.2
MSTRG.9725 Avicennia marina HOM05D005043 ORTHO05D000110 4.0e-12 75.9 92 51.1
QL10p059329 Quercus lobata HOM05D004131 ORTHO05D004778 5.8e-11 72.0 45 80.0
Lju470A13T22 Lonicera japonica HOM05D004131 ORTHO05D004778 1.7e-10 70.5 48 77.1
Sed0017538 Sechium edule HOM05D004131 ORTHO05D004778 1.7e-10 70.5 33 97.0
BcaC07g40452 Brassica carinata HOM05D004131 ORTHO05D004778 1.0e-07 61.2 45 68.9
Carub.0005s2652 Capsella rubella HOM05D004131 ORTHO05D004778 8.7e-07 58.2 40 72.5
Zm00001eb027620 Zea mays HOM05D002020 ORTHO05D002046 5.6e-06 55.5 38 73.7


User provided reference genes

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