Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G1030 Trochodendron aralioides HOM05D007427 ORTHO05D006413 2.3e-21 106.3 65 100.0
Nn3g19877 Nelumbo nucifera HOM05D007427 ORTHO05D006413 5.2e-13 78.6 66 62.1
QL09p044390 Quercus lobata HOM05D007427 ORTHO05D006413 5.8e-12 75.1 43 74.4
Thecc.01G231600 Theobroma cacao HOM05D007427 ORTHO05D006413 9.9e-12 74.3 66 60.6
Duzib211G0080 Durio zibethinus HOM05D007427 ORTHO05D006413 4.9e-11 72.0 44 79.5
CiPaw.04G107800 Carya illinoinensis HOM05D007427 ORTHO05D006413 6.4e-11 71.6 60 63.3
Haze_24760 Corylus avellana HOM05D007427 ORTHO05D006413 1.1e-10 70.9 65 61.5
COL.COLO4_28358 Corchorus olitorius HOM05D007427 ORTHO05D006413 4.1e-10 68.9 51 64.7
Duzib138G0914 Durio zibethinus HOM05D007427 ORTHO05D006413 4.1e-10 68.9 44 75.0
Duzib138G1712 Durio zibethinus HOM05D007427 ORTHO05D006413 4.1e-10 68.9 39 79.5
COL.COLO4_17317 Corchorus olitorius HOM05D007427 ORTHO05D006413 2.1e-09 66.6 47 74.5
QL09p044388 Quercus lobata HOM05D007427 ORTHO05D006413 2.7e-09 66.2 43 67.4
Lj1g0018605 Lotus japonicus HOM05D007427 ORTHO05D006413 4.6e-09 65.5 65 53.8
Thecc.01G231700 Theobroma cacao HOM05D007427 ORTHO05D006413 4.6e-09 65.5 55 60.0
Dinv19234 Davidia involucrata HOM05D007427 ORTHO05D006413 7.8e-09 64.7 45 68.9
Hma1.2p1_1858F.1_g305540 Hydrangea macrophylla HOM05D007427 ORTHO05D006413 7.8e-09 64.7 45 64.4
Actinidia23744 Actinidia chinensis HOM05D007427 ORTHO05D006413 1.3e-08 63.9 44 65.9
Gohir.D07G160800 Gossypium hirsutum HOM05D007427 ORTHO05D006413 1.3e-08 63.9 66 54.5
CiPaw.03G152700 Carya illinoinensis HOM05D007427 ORTHO05D006413 1.7e-08 63.5 47 72.3
Glyma.03G170800 Glycine max HOM05D007427 ORTHO05D006413 2.3e-08 63.2 67 49.3
Gohir.A07G154400 Gossypium hirsutum HOM05D007427 ORTHO05D006413 2.3e-08 63.2 45 73.3
Gorai.001G183700 Gossypium raimondii HOM05D007427 ORTHO05D006413 2.3e-08 63.2 68 58.8
Nn1g03106 Nelumbo nucifera HOM05D007427 ORTHO05D006413 3.9e-08 62.4 56 53.6
CSS0029156 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 6.6e-08 61.6 70 52.9
CSS0036288 Camellia sinensis var. sinensis HOM05D007427 ORTHO05D006413 6.6e-08 61.6 70 52.9
MD05G1181500 Malus domestica HOM05D007427 ORTHO05D006413 1.1e-07 60.8 66 51.5
Prupe.8G208000 Prunus persica HOM05D007427 ORTHO05D006413 1.1e-07 60.8 64 54.7
Cpa.g.sc8.193 Carica papaya HOM05D007427 ORTHO05D006413 1.9e-07 60.1 40 70.0
Ciclev10022672m.g Citrus clementina HOM05D007427 ORTHO05D006413 1.9e-07 60.1 83 49.4
Manes.12G043600 Manihot esculenta HOM05D007427 ORTHO05D006413 1.9e-07 60.1 57 57.9
Phvul.001G168900 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 1.9e-07 60.1 64 51.6
Rhsim13G0042300 Rhododendron simsii HOM05D007427 ORTHO05D006413 1.9e-07 60.1 65 52.3
TWI59G1478 Tripterygium wilfordii HOM05D007427 ORTHO05D006413 2.5e-07 59.7 45 71.1
VMungo1383G3325 Vigna mungo HOM05D007427 ORTHO05D006413 2.5e-07 59.7 64 50.0
Gohir.A07G154300 Gossypium hirsutum HOM05D007427 ORTHO05D006413 4.3e-07 58.9 59 50.8
Gohir.D07G160600 Gossypium hirsutum HOM05D007427 ORTHO05D006413 4.3e-07 58.9 59 50.8
Gorai.001G183600 Gossypium raimondii HOM05D007427 ORTHO05D006413 4.3e-07 58.9 59 50.8
Atru.chr5.1886 Acer truncatum HOM05D007427 ORTHO05D006413 5.6e-07 58.5 53 62.3
Cpa.g.sc8.192 Carica papaya HOM05D017908 ORTHO05D020344 5.6e-07 58.5 45 64.4
Sabra02G0191700 Salix brachista HOM05D007427 ORTHO05D006413 5.6e-07 58.5 52 59.6
Ciclev10022773m.g Citrus clementina HOM05D007427 ORTHO05D006413 7.3e-07 58.2 61 54.1
Lalb_Chr25g0289621 Lupinus albus HOM05D007427 ORTHO05D006413 7.3e-07 58.2 43 55.8
Glyma.03G170900 Glycine max HOM05D007427 ORTHO05D006413 9.5e-07 57.8 66 50.0
Glyma.19G171900 Glycine max HOM05D007427 ORTHO05D006413 1.2e-06 57.4 66 47.0
Lalb_Chr01g0019331 Lupinus albus HOM05D007427 ORTHO05D006413 2.1e-06 56.6 43 55.8
Potri.002G252400 Populus trichocarpa HOM05D007427 ORTHO05D006413 2.1e-06 56.6 52 59.6
Duzib138G0919 Durio zibethinus HOM05D007427 ORTHO05D006413 6.2e-06 55.1 86 40.7
Medtr7g099670 Medicago truncatula HOM05D007427 ORTHO05D006413 6.2e-06 55.1 65 52.3
Oeu017346.1 Olea europaea HOM05D032567 ORTHO05D036960 6.2e-06 55.1 42 59.5
Lj1g0008336 Lotus japonicus HOM05D007427 ORTHO05D006413 8.1e-06 54.7 61 49.2


User provided reference genes

Program Settings