Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G1012 Trochodendron aralioides HOM05D004802 ORTHO05D005591 3.8e-73 278.1 143 100.0
GSVIVG01007807001 Vitis vinifera HOM05D004802 ORTHO05D005591 8.0e-63 243.8 143 86.7
ECA232G0284 Erigeron canadensis HOM05D004802 ORTHO05D005591 6.7e-62 240.7 144 84.0
DCAR_016496 Daucus carota HOM05D004802 ORTHO05D005591 1.5e-61 239.6 143 82.5
DCAR_021562 Daucus carota HOM05D004802 ORTHO05D005591 5.7e-61 237.7 143 83.9
HanXRQChr05g0155531 Helianthus annuus HOM05D004802 ORTHO05D005591 5.7e-61 237.7 143 82.5
CsaV3_1G001710 Cucumis sativus L. HOM05D004802 ORTHO05D005591 4.8e-60 234.6 144 81.9
MSTRG.23103 Avicennia marina HOM05D004802 ORTHO05D005591 6.3e-60 234.2 143 83.2
Lsat_1_v5_gn_5_17000 Lactuca sativa HOM05D004802 ORTHO05D005591 8.2e-60 233.8 144 81.2
Potri.014G111100 Populus trichocarpa HOM05D004802 ORTHO05D005591 1.8e-59 232.6 143 81.8
Cfa019082 Carpinus fangiana HOM05D004802 ORTHO05D005591 5.3e-59 231.1 143 81.8
Cpa.g.sc110.33 Carica papaya HOM05D004802 ORTHO05D005591 7.0e-59 230.7 144 81.2
Migut.D01783 Erythranthe guttata HOM05D004802 ORTHO05D005591 7.0e-59 230.7 143 81.1
Glyma.04G171700 Glycine max HOM05D004802 ORTHO05D005591 2.6e-58 228.8 144 79.9
Lalb_Chr23g0265291 Lupinus albus HOM05D004802 ORTHO05D005591 2.6e-58 228.8 150 77.3
SGA_v2.0_scaffold114G31844 Striga asiatica HOM05D004802 ORTHO05D005591 2.6e-58 228.8 143 81.8
Eucgr.B00348 Eucalyptus grandis HOM05D004802 ORTHO05D005591 3.5e-58 228.4 146 78.8
CSS0033619 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 4.5e-58 228.0 144 80.6
ATR0796G060 Amborella trichopoda HOM05D004802 ORTHO05D005591 5.9e-58 227.6 143 79.7
MD14G1184900 Malus domestica HOM05D004802 ORTHO05D005591 5.9e-58 227.6 141 81.6
unitig_27.g24928 Utricularia gibba HOM05D004802 ORTHO05D005591 1.0e-57 226.9 143 79.7
Hma1.2p1_0483F.1_g162710 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 2.2e-57 225.7 143 80.4
PGR083G1798 Punica granatum HOM05D004802 ORTHO05D005591 2.2e-57 225.7 143 79.7
Glyma.06G192200 Glycine max HOM05D004802 ORTHO05D005591 2.9e-57 225.3 143 77.6
MBI19_g12136_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 2.9e-57 225.3 143 79.0
vmacro16596 Vaccinium macrocarpon HOM05D004802 ORTHO05D005591 2.9e-57 225.3 144 79.9
VMungo1309G2385 Vigna mungo HOM05D004802 ORTHO05D005591 2.9e-57 225.3 143 78.3
Prupe.5G177600 Prunus persica HOM05D004802 ORTHO05D005591 3.8e-57 224.9 143 81.1
Phvul.009G188900 Phaseolus vulgaris HOM05D004802 ORTHO05D005591 5.0e-57 224.6 143 78.3
Manes.12G158200 Manihot esculenta HOM05D004802 ORTHO05D005591 1.1e-56 223.4 143 80.4
Actinidia34948 Actinidia chinensis HOM05D004802 ORTHO05D005591 2.5e-56 222.2 132 85.6
LjContig00081g0027263 Lotus japonicus HOM05D004802 ORTHO05D005591 2.5e-56 222.2 143 78.3
Sc16g0001640 Simmondsia chinensis HOM05D004802 ORTHO05D005591 2.5e-56 222.2 145 77.9
Rhsim12G0162600 Rhododendron simsii HOM05D004802 ORTHO05D005591 3.2e-56 221.9 144 78.5
RcHm_v2.0_Chr7g0179521 Rosa chinensis HOM05D004802 ORTHO05D005591 3.2e-56 221.9 143 79.7
QL03p066954 Quercus lobata HOM05D004802 ORTHO05D005591 4.2e-56 221.5 143 80.4
Actinidia19087 Actinidia chinensis HOM05D004802 ORTHO05D005591 5.5e-56 221.1 131 86.3
CDE01G0824 Ceratophyllum demersum HOM05D004802 ORTHO05D005591 5.5e-56 221.1 145 77.9
Aqoxy5G00387 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 9.4e-56 220.3 144 79.2
CANSAT80G2080 Cannabis sativa HOM05D004802 ORTHO05D005591 1.2e-55 219.9 144 79.2
Sed0010100 Sechium edule HOM05D004802 ORTHO05D005591 1.2e-55 219.9 144 75.0
Cc00_g03600 Coffea canephora HOM05D004802 ORTHO05D005591 1.6e-55 219.5 147 76.2
Manes.15G185900 Manihot esculenta HOM05D004802 ORTHO05D005591 1.6e-55 219.5 143 81.1
Nitab4.5_0000499g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 2.1e-55 219.2 144 77.1
MBI18_g21823_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 2.7e-55 218.8 144 78.5
Oeu026523.1 Olea europaea HOM05D004802 ORTHO05D005591 2.7e-55 218.8 145 77.9
Psat2g170440 Pisum sativum HOM05D004802 ORTHO05D005591 4.7e-55 218.0 144 75.7
HanXRQChr05g0163301 Helianthus annuus HOM05D004802 ORTHO05D005591 6.1e-55 217.6 146 79.5
HanXRQChr05g0163571 Helianthus annuus HOM05D004802 ORTHO05D005591 6.1e-55 217.6 146 79.5
arahy.Tifrunner.gnm1.ann1.H02ACK Arachis hypogaea HOM05D004802 ORTHO05D005591 8.0e-55 217.2 146 74.7
BcaC07g41973 Brassica carinata HOM05D004802 ORTHO05D005591 8.0e-55 217.2 148 74.3
C08p50320 Brassica napus HOM05D004802 ORTHO05D005591 8.0e-55 217.2 148 74.3
BolC8t52561H Brassica oleracea HOM05D004802 ORTHO05D005591 8.0e-55 217.2 148 74.3
SalBow2G1273 Salvia bowleyana HOM05D004802 ORTHO05D005591 1.0e-54 216.9 144 79.9
TWI32G0003 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 1.4e-54 216.5 143 75.5
arahy.Tifrunner.gnm1.ann1.J5PS4T Arachis hypogaea HOM05D004802 ORTHO05D005591 1.8e-54 216.1 146 75.3
BolC5t29353H Brassica oleracea HOM05D000129 ORTHO05D005591 1.8e-54 216.1 145 75.9
BraA06t23701Z Brassica rapa HOM05D004802 ORTHO05D005591 1.8e-54 216.1 146 76.7
PSO170G0191 Papaver somniferum HOM05D004802 ORTHO05D005591 2.3e-54 215.7 148 74.3
HPP92_014441 Vanilla planifolia HOM05D004802 ORTHO05D005591 2.3e-54 215.7 139 79.1
Dinv41117 Davidia involucrata HOM05D001600 ORTHO05D001502 3.0e-54 215.3 131 83.2
Sp1g06517 Schrenkiella parvula HOM05D004802 ORTHO05D005591 3.0e-54 215.3 144 75.0
Carub.0005s0629 Capsella rubella HOM05D004802 ORTHO05D005591 4.0e-54 214.9 145 74.5
Solyc03g114050.3 Solanum lycopersicum HOM05D004802 ORTHO05D005591 4.0e-54 214.9 143 76.9
Sopen03g033100 Solanum pennellii HOM05D004802 ORTHO05D005591 4.0e-54 214.9 143 76.9
THA.LOC104818227 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 6.7e-54 214.2 146 74.0
AL1G18110 Arabidopsis lyrata HOM05D004802 ORTHO05D005591 8.8e-54 213.8 144 74.3
A09p66160 Brassica napus HOM05D004802 ORTHO05D005591 8.8e-54 213.8 146 76.0
BraA09t41954Z Brassica rapa HOM05D004802 ORTHO05D005591 8.8e-54 213.8 146 76.0
Hund18328 Selenicereus undatus HOM05D004802 ORTHO05D005591 1.2e-53 213.4 139 76.3
Thecc.03G006700 Theobroma cacao HOM05D004802 ORTHO05D005591 1.2e-53 213.4 144 78.5
AUR62025410 Chenopodium quinoa HOM05D004802 ORTHO05D005591 1.5e-53 213.0 143 73.4
Aqoxy3G02494 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 2.0e-53 212.6 144 77.1
TPR.G6374 Trifolium pratense HOM05D004802 ORTHO05D005591 2.6e-53 212.2 143 76.2
AUR62008830 Chenopodium quinoa HOM05D004802 ORTHO05D005591 3.3e-53 211.8 143 72.7
CARHR007640 Cardamine hirsuta HOM05D004802 ORTHO05D005591 4.4e-53 211.5 144 73.6
Sc12g0005500 Simmondsia chinensis HOM05D004802 ORTHO05D005591 4.4e-53 211.5 144 72.2
PSO782G1633 Papaver somniferum HOM05D004802 ORTHO05D005591 5.7e-53 211.1 148 72.3
TPR.G20968 Trifolium pratense HOM05D004802 ORTHO05D005591 5.7e-53 211.1 143 75.5
Potri.002G185800 Populus trichocarpa HOM05D004802 ORTHO05D005591 7.5e-53 210.7 145 75.2
AT1G07830 Arabidopsis thaliana HOM05D004802 ORTHO05D005591 9.7e-53 210.3 145 73.1
ECA246G1319 Erigeron canadensis HOM05D004802 ORTHO05D005591 9.7e-53 210.3 165 68.5
PGSC0003DMG400024483 Solanum tuberosum HOM05D004802 ORTHO05D005591 1.3e-52 209.9 143 74.1
EL10Ac7g17734 Beta vulgaris HOM05D004802 ORTHO05D005591 1.7e-52 209.5 143 75.5
BcaC07g42500 Brassica carinata HOM05D004802 ORTHO05D005591 1.7e-52 209.5 147 72.8
COL.COLO4_24762 Corchorus olitorius HOM05D004802 ORTHO05D005591 1.7e-52 209.5 144 77.1
TWI75G1644 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 1.7e-52 209.5 143 74.8
Ah.08g213760 Amaranthus hybridus HOM05D004802 ORTHO05D005591 2.8e-52 208.8 143 73.4
BcaB02g06722 Brassica carinata HOM05D004802 ORTHO05D005591 4.8e-52 208.0 147 72.1
Aa31LG3G15940 Aethionema arabicum HOM05D004802 ORTHO05D005591 6.3e-52 207.6 146 73.3
C05p05910 Brassica napus HOM05D005594 ORTHO05D006403 6.3e-52 207.6 140 75.7
Duzib068G0850 Durio zibethinus HOM05D004802 ORTHO05D005591 6.3e-52 207.6 148 75.7
Cpa.g.sc170.28 Carica papaya HOM05D004802 ORTHO05D005591 8.2e-52 207.2 133 78.9
FvH4_5g16620 Fragaria vesca HOM05D004802 ORTHO05D005591 1.1e-51 206.8 143 74.8
MD06G1178500 Malus domestica HOM05D004802 ORTHO05D005591 1.4e-51 206.5 111 90.1
Peaxi162Scf00689g00332 Petunia axillaris HOM05D004802 ORTHO05D005591 1.4e-51 206.5 143 74.8
THA.LOC104821462 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 1.4e-51 206.5 146 71.9
Aqoxy3G01788 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 1.8e-51 206.1 146 73.3
Atru.chr9.2421 Acer truncatum HOM05D004802 ORTHO05D005591 2.4e-51 205.7 152 69.1
FAN18G4009 Fragaria x ananassa HOM05D004802 ORTHO05D005591 3.1e-51 205.3 143 74.1
FAN13G0264 Fragaria x ananassa HOM05D004802 ORTHO05D005591 7.0e-51 204.1 143 73.4
Ca_06425_v3 Cicer arietinum L. HOM05D000308 ORTHO05D000194 9.1e-51 203.8 145 73.1
Thhalv10009035m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 9.1e-51 203.8 145 71.7
Medtr5g015850 Medicago truncatula HOM05D004802 ORTHO05D005591 1.2e-50 203.4 143 75.5
Rhsim08G0169000 Rhododendron simsii HOM05D004802 ORTHO05D005591 1.6e-50 203.0 174 64.4
SEGI_23384 Sequoiadendron giganteum HOM05D004802 ORTHO05D005591 2.0e-50 202.6 143 74.1
arahy.Tifrunner.gnm1.ann1.RYE93B Arachis hypogaea HOM05D004802 ORTHO05D005591 3.5e-50 201.8 170 64.7
Ciclev10022742m.g Citrus clementina HOM05D004802 ORTHO05D005591 3.5e-50 201.8 145 75.9
FAN08G2523 Fragaria x ananassa HOM05D004802 ORTHO05D005591 4.5e-50 201.4 141 73.8
Thhalv10014955m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 1.3e-49 199.9 146 71.2
MELO3C017111.2 Cucumis melo HOM05D004802 ORTHO05D005591 2.2e-49 199.1 220 53.6
Hma1.2p1_2640F.1_g325880 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 2.9e-49 198.7 117 82.9
Peaxi162Scf00017g02344 Petunia axillaris HOM05D004802 ORTHO05D005591 2.9e-49 198.7 145 71.0
Nitab4.5_0001422g0100 Nicotiana tabacum HOM05D004802 ORTHO05D005591 8.5e-49 197.2 110 84.5
Gohir.A12G276300 Gossypium hirsutum HOM05D004802 ORTHO05D005591 1.5e-48 196.4 147 70.7
Gorai.008G297400 Gossypium raimondii HOM05D004802 ORTHO05D005591 1.5e-48 196.4 147 70.7
Zm00001eb378540 Zea mays HOM05D004802 ORTHO05D005591 4.2e-48 194.9 142 71.1
Gohir.D12G276900 Gossypium hirsutum HOM05D004802 ORTHO05D005591 5.5e-48 194.5 147 70.1
Dinv25814 Davidia involucrata HOM05D004802 ORTHO05D005591 4.0e-46 188.3 107 84.1
FAN04G1836 Fragaria x ananassa HOM05D004802 ORTHO05D005591 7.5e-45 184.1 116 77.6
Os06g0128500 Oryza sativa ssp. japonica HOM05D004802 ORTHO05D005591 2.4e-43 179.1 143 65.7
Nitab4.5_0008768g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 5.4e-43 177.9 204 51.0
CiPaw.11G030400 Carya illinoinensis HOM05D004802 ORTHO05D005591 7.7e-42 174.1 107 81.3
Haze_07452 Corylus avellana HOM05D004802 ORTHO05D005591 1.1e-40 170.2 109 77.1
ClCG06G016810 Citrullus lanatus HOM05D004802 ORTHO05D005591 2.8e-39 165.6 92 87.0
Cc00_g07690 Coffea canephora HOM05D004802 ORTHO05D005591 2.8e-39 165.6 111 77.5
QL10p013461 Quercus lobata HOM05D004802 ORTHO05D005591 3.6e-39 165.2 95 85.3
RcHm_v2.0_Chr3g0484411 Rosa chinensis HOM05D004802 ORTHO05D005591 4.7e-39 164.9 90 88.9
QL03p067058 Quercus lobata HOM05D004802 ORTHO05D005591 5.2e-38 161.4 88 87.5
Nn2g12605 Nelumbo nucifera HOM05D004802 ORTHO05D005591 2.2e-36 156.0 101 80.2
Cc00_g30360 Coffea canephora HOM05D004802 ORTHO05D005591 1.9e-32 142.9 112 66.1
Pp3c17_20320 Physcomitrium patens HOM05D004802 ORTHO05D005591 2.1e-31 139.4 120 55.0
Mapoly0009s0030 Marchantia polymorpha HOM05D004802 ORTHO05D005591 1.2e-29 133.7 143 53.1
Nitab4.5_0000003g0430 Nicotiana tabacum HOM05D004802 ORTHO05D005591 4.9e-28 128.3 145 53.1
CBR_g30055 Chara braunii HOM05D004802 ORTHO05D005591 2.3e-25 119.4 108 56.5
RcHm_v2.0_Chr3g0484341 Rosa chinensis HOM05D004802 ORTHO05D005591 4.3e-24 115.2 63 92.1
Hma1.2p1_0107F.1_g051480 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 1.2e-21 107.1 60 88.3
SHI01132 Sapria himalayana HOM05D004802 ORTHO05D005591 2.0e-21 106.3 89 62.9
SMO228G0088 Selaginella moellendorffii HOM05D004802 ORTHO05D005591 2.2e-20 102.8 86 53.5
AagrBONN_evm.TU.Sc2ySwM_368.3252 Anthoceros agrestis HOM05D004802 ORTHO05D005591 3.7e-20 102.1 90 55.6
A06p04970 Brassica napus HOM05D004802 ORTHO05D005591 1.9e-16 89.7 113 47.8
MCO15G004 Micromonas commoda HOM05D004802 ORTHO05D005591 2.6e-13 79.3 141 36.2
Haze_26898 Corylus avellana HOM05D004802 ORTHO05D005591 2.2e-12 76.3 104 41.3
Pp3c14_16960 Physcomitrium patens HOM05D004802 ORTHO05D005591 2.4e-11 72.8 63 57.1
CSS0004783 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 1.2e-10 70.5 59 64.4
A09p37440 Brassica napus HOM05D004802 ORTHO05D005591 2.7e-10 69.3 49 69.4
RcHm_v2.0_Chr2g0130991 Rosa chinensis HOM05D004802 ORTHO05D005591 1.0e-09 67.4 66 54.5
Haze_07453 Corylus avellana HOM05D004802 ORTHO05D005591 3.0e-09 65.9 35 88.6
Cfa024847 Carpinus fangiana HOM05D004802 ORTHO05D005591 1.2e-07 60.5 80 42.5
SHI01130 Sapria himalayana HOM05D004802 ORTHO05D005591 3.6e-07 58.9 54 53.7
PRCOL_00002926 Prasinoderma coloniale HOM05D004802 ORTHO05D005591 6.2e-07 58.2 98 41.8
A06p04960 Brassica napus HOM05D005594 ORTHO05D006403 1.1e-06 57.4 58 60.3
BolC3t13075H Brassica oleracea HOM05D004802 ORTHO05D005591 1.4e-06 57.0 29 86.2


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