Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G1011 Trochodendron aralioides HOM05D007057 ORTHO05D008878 8.0e-207 724.5 742 100.0
Dinv04346 Davidia involucrata HOM05D007057 ORTHO05D008878 4.8e-87 326.6 738 75.1
Nn4g26683 Nelumbo nucifera HOM05D007057 ORTHO05D008878 2.0e-80 304.7 739 74.0
Cfa006273 Carpinus fangiana HOM05D007057 ORTHO05D008878 2.1e-74 284.6 692 66.6
GSVIVG01019130001 Vitis vinifera HOM05D007057 ORTHO05D008878 2.8e-74 284.3 694 68.3
QL01p045590 Quercus lobata HOM05D007057 ORTHO05D008878 5.7e-72 276.6 719 64.4
Aqoxy2G03299 Aquilegia oxysepala HOM05D007057 ORTHO05D008878 9.8e-72 275.8 729 70.2
FAN14G3263 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.1e-70 272.3 721 64.4
FAN09G2991 Fragaria x ananassa HOM05D007057 ORTHO05D008878 2.0e-69 268.1 721 63.5
Haze_04538 Corylus avellana HOM05D007057 ORTHO05D008878 1.3e-68 265.4 692 65.8
FAN02G0321 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.3e-68 265.4 720 61.8
FAN05G1805 Fragaria x ananassa HOM05D007057 ORTHO05D008878 3.9e-68 263.8 722 61.8
Ah.04g158850 Amaranthus hybridus HOM05D007057 ORTHO05D008878 6.6e-68 263.1 726 70.9
CsaV3_1G044640 Cucumis sativus L. HOM05D007057 ORTHO05D008878 8.6e-68 262.7 691 65.6
Potri.013G087200 Populus trichocarpa HOM05D007057 ORTHO05D008878 9.5e-67 259.2 719 66.5
MELO3C010073.2 Cucumis melo HOM05D007057 ORTHO05D008878 1.8e-65 255.0 734 62.1
FvH4_6g00680 Fragaria vesca HOM05D007057 ORTHO05D008878 3.1e-65 254.2 721 61.7
Manes.08G104600 Manihot esculenta HOM05D007057 ORTHO05D008878 6.8e-65 253.1 735 66.3
AUR62006672 Chenopodium quinoa HOM05D007057 ORTHO05D008878 1.3e-63 248.8 694 69.9
Glyma.18G240800 Glycine max HOM05D007057 ORTHO05D008878 2.9e-63 247.7 693 63.6
ClCG03G010890 Citrullus lanatus HOM05D007057 ORTHO05D008878 8.3e-63 246.1 716 58.9
Gohir.D04G026500 Gossypium hirsutum HOM05D007057 ORTHO05D008878 1.4e-62 245.4 718 69.4
Duzib128G1528 Durio zibethinus HOM05D007057 ORTHO05D008878 4.6e-61 240.4 718 66.9
Glyma.09G251800 Glycine max HOM05D007057 ORTHO05D008878 6.0e-61 240.0 720 61.9
VMungo1383G0494 Vigna mungo HOM05D007057 ORTHO05D008878 6.0e-61 240.0 707 63.1
vmacro06001 Vaccinium macrocarpon HOM05D007057 ORTHO05D008878 3.9e-60 237.3 721 65.5
Lalb_Chr19g0126731 Lupinus albus HOM05D007057 ORTHO05D008878 8.6e-60 236.1 719 63.8
Gohir.A05G390700 Gossypium hirsutum HOM05D007057 ORTHO05D008878 1.1e-59 235.7 718 68.8
Lj1g0009704 Lotus japonicus HOM05D007057 ORTHO05D008878 1.5e-59 235.3 692 59.1
Rhsim03G0265600 Rhododendron simsii HOM05D007057 ORTHO05D008878 7.3e-59 233.0 744 65.9
CANSAT54G2802 Cannabis sativa HOM05D007057 ORTHO05D008878 1.1e-57 229.2 726 60.6
MBI08_g39972_MAGBIO Magnolia biondii HOM05D007057 ORTHO05D008878 1.1e-57 229.2 724 67.8
TWI18G1405 Tripterygium wilfordii HOM05D007057 ORTHO05D008878 1.8e-57 228.4 694 60.5
AUR62000330 Chenopodium quinoa HOM05D007057 ORTHO05D008878 3.1e-57 227.6 694 67.3
Gorai.012G029100 Gossypium raimondii HOM05D007057 ORTHO05D008878 3.1e-57 227.6 715 69.9
Cpa.g.sc123.6 Carica papaya HOM05D007057 ORTHO05D008878 5.2e-57 226.9 721 65.6
Duzib177G0705 Durio zibethinus HOM05D007057 ORTHO05D008878 6.8e-57 226.5 718 63.8
Lalb_Chr03g0038391 Lupinus albus HOM05D007057 ORTHO05D008878 6.8e-57 226.5 718 64.2
Medtr7g079550 Medicago truncatula HOM05D007057 ORTHO05D008878 5.8e-56 223.4 694 66.0
Cc09_g03450 Coffea canephora HOM05D007057 ORTHO05D008878 7.5e-56 223.0 727 67.8
Atru.chr10.1100 Acer truncatum HOM05D007057 ORTHO05D008878 2.9e-55 221.1 694 68.4
RcHm_v2.0_Chr3g0448121 Rosa chinensis HOM05D007057 ORTHO05D008878 3.7e-55 220.7 719 64.7
Nitab4.5_0001857g0020 Nicotiana tabacum HOM05D007057 ORTHO05D008878 8.3e-55 219.5 700 71.0
Prupe.6G359800 Prunus persica HOM05D007057 ORTHO05D008878 1.9e-54 218.4 637 64.7
TPR.G28458 Trifolium pratense HOM05D007057 ORTHO05D008878 5.4e-54 216.9 726 63.2
Thecc.05G201600 Theobroma cacao HOM05D007057 ORTHO05D008878 2.7e-53 214.5 720 64.6
EL10Ac4g09982 Beta vulgaris HOM05D007057 ORTHO05D008878 6.0e-53 213.4 721 67.3
Nitab4.5_0000946g0060 Nicotiana tabacum HOM05D007057 ORTHO05D008878 1.7e-52 211.8 748 67.9
PSO675G4505 Papaver somniferum HOM05D007057 ORTHO05D008878 8.6e-52 209.5 733 61.8
Peaxi162Scf00976g00023 Petunia axillaris HOM05D007057 ORTHO05D008878 2.5e-51 208.0 737 64.2
Peaxi162Scf00006g00421 Petunia axillaris HOM05D007057 ORTHO05D008878 3.1e-49 201.1 728 64.3
Sc16g0010320 Simmondsia chinensis HOM05D007057 ORTHO05D008878 6.8e-49 199.9 721 65.9
Oeu010152.2 Olea europaea HOM05D007057 ORTHO05D008878 2.6e-48 198.0 727 64.5
Actinidia34764 Actinidia chinensis HOM05D007057 ORTHO05D008878 3.4e-48 197.6 694 63.7
Eucgr.H01380 Eucalyptus grandis HOM05D007057 ORTHO05D008878 1.7e-47 195.3 694 60.5
CAN.G217.2 Capsicum annuum HOM05D007057 ORTHO05D008878 7.1e-46 189.9 726 61.8
DCAR_001923 Daucus carota HOM05D007057 ORTHO05D008878 2.1e-45 188.3 689 60.4
Ca_07967_v3 Cicer arietinum L. HOM05D007057 ORTHO05D008878 4.6e-45 187.2 720 58.8
Solyc04g056640.1 Solanum lycopersicum HOM05D007057 ORTHO05D008878 4.6e-45 187.2 737 62.7
Sopen04g025560 Solanum pennellii HOM05D007057 ORTHO05D008878 1.7e-44 185.3 737 62.6
HanXRQChr01g0025821 Helianthus annuus HOM05D007057 ORTHO05D008878 1.5e-43 182.2 720 65.6
TWI75G1373 Tripterygium wilfordii HOM05D007057 ORTHO05D008878 5.6e-43 180.3 721 63.4
Sed0005007 Sechium edule HOM05D007057 ORTHO05D008878 2.8e-42 177.9 715 58.9
MSTRG.8219 Avicennia marina HOM05D007057 ORTHO05D008878 8.1e-42 176.4 753 59.4
Lsat_1_v5_gn_1_58361 Lactuca sativa HOM05D007057 ORTHO05D008878 8.9e-41 172.9 723 66.8
PSO017G0140 Papaver somniferum HOM05D007057 ORTHO05D008878 2.6e-40 171.4 739 60.5
Migut.L01029 Erythranthe guttata HOM05D007057 ORTHO05D008878 5.8e-40 170.2 727 61.6
Psat3g104800 Pisum sativum HOM05D007057 ORTHO05D008878 1.7e-39 168.7 724 60.8
CSS0046667 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 2.9e-39 167.9 220 60.9
THA.LOC104823816 Tarenaya hassleriana HOM05D007057 ORTHO05D008878 2.9e-39 167.9 725 59.4
PGSC0003DMG400010523 Solanum tuberosum HOM05D007057 ORTHO05D008878 6.4e-39 166.8 419 78.0
PGR031G0541 Punica granatum HOM05D007057 ORTHO05D008878 3.0e-36 157.9 717 58.0
ECA248G3256 Erigeron canadensis HOM05D007057 ORTHO05D008878 5.1e-36 157.1 690 65.2
CiPaw.07G078900 Carya illinoinensis HOM05D007057 ORTHO05D008878 1.1e-35 156.0 596 62.6
Ciclev10013603m.g Citrus clementina HOM05D007057 ORTHO05D008878 7.3e-35 153.3 222 60.4
FAN27G3162 Fragaria x ananassa HOM05D007057 ORTHO05D008878 1.6e-34 152.1 221 51.1
CSS0040779 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 6.2e-34 150.2 546 63.4
Phvul.008G055400 Phaseolus vulgaris HOM05D007057 ORTHO05D008878 9.0e-33 146.4 366 46.7
HPP92_021394 Vanilla planifolia HOM05D007057 ORTHO05D008878 1.5e-32 145.6 728 53.3
FAN28G1564 Fragaria x ananassa HOM05D007057 ORTHO05D008878 5.8e-32 143.7 212 51.4
CSS0018282 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 7.6e-32 143.3 201 71.1
CSS0040898 Camellia sinensis var. sinensis HOM05D007057 ORTHO05D008878 7.6e-32 143.3 201 71.1
Aa31LG2G2430 Aethionema arabicum HOM05D007057 ORTHO05D008878 1.1e-30 139.4 694 55.3
ATR0824G263 Amborella trichopoda HOM05D007057 ORTHO05D008878 8.7e-28 129.8 747 54.6
SGA_v2.0_scaffold71G23872 Striga asiatica HOM05D007057 ORTHO05D008878 1.1e-27 129.4 695 60.6
C02p21340 Brassica napus HOM05D007057 ORTHO05D008878 1.8e-25 122.1 687 59.2
CARHR057050 Cardamine hirsuta HOM05D007057 ORTHO05D008878 4.0e-25 120.9 692 57.7
Sp5g20120 Schrenkiella parvula HOM05D007057 ORTHO05D008878 5.3e-25 120.6 688 61.5
BcaC03g14695 Brassica carinata HOM05D007057 ORTHO05D008878 3.4e-24 117.9 221 46.2
A02p13180 Brassica napus HOM05D007057 ORTHO05D008878 3.4e-24 117.9 221 45.2
BolC2t08271H Brassica oleracea HOM05D007057 ORTHO05D008878 3.4e-24 117.9 221 46.2
BraA02t06374Z Brassica rapa HOM05D007057 ORTHO05D008878 3.4e-24 117.9 221 46.2
AL2G22040 Arabidopsis lyrata HOM05D007057 ORTHO05D008878 4.5e-24 117.5 694 57.5
Carub.0002s1110 Capsella rubella HOM05D007057 ORTHO05D008878 2.2e-23 115.2 692 59.7
Thhalv10018195m.g Eutrema salsugineum HOM05D007057 ORTHO05D008878 2.2e-23 115.2 222 40.1
AT1G65380 Arabidopsis thaliana HOM05D007057 ORTHO05D008878 2.9e-23 114.8 692 58.5
BcaB05g24110 Brassica carinata HOM05D007057 ORTHO05D008878 8.4e-23 113.2 221 45.7
Os02g0603100 Oryza sativa ssp. japonica HOM05D007057 ORTHO05D008878 2.8e-18 98.2 235 57.0
COL.COLO4_27405 Corchorus olitorius HOM05D007057 ORTHO05D008878 3.1e-17 94.7 382 67.5
AUR62000327 Chenopodium quinoa HOM05D007057 ORTHO05D008878 1.4e-14 85.9 416 53.6
Zm00001eb184050 Zea mays HOM05D007057 ORTHO05D008878 2.7e-13 81.6 238 55.0
FAN26G2527 Fragaria x ananassa HOM05D007057 ORTHO05D008878 2.3e-12 78.6 76 53.9
SalBow6G0986 Salvia bowleyana HOM05D007057 ORTHO05D008878 1.1e-11 76.3 78 47.4
SEGI_34516 Sequoiadendron giganteum HOM05D007057 ORTHO05D008878 2.1e-10 72.0 193 58.5
SEGI_35016 Sequoiadendron giganteum HOM05D007057 ORTHO05D008878 2.1e-10 72.0 193 58.5
BcaB05g24107 Brassica carinata HOM05D007057 ORTHO05D008878 2.2e-07 62.0 90 75.6


User provided reference genes

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