Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 1.3e-299 1032.3 520 100.0
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 7.1e-202 707.6 520 70.8
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 1.8e-197 693.0 515 68.3
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 1.2e-196 690.3 515 68.2
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 3.5e-193 678.7 510 68.4
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 4.0e-189 665.2 515 65.8
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-187 660.2 517 65.6
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 2.2e-187 659.4 517 65.6
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 6.4e-187 657.9 522 66.1
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-184 650.2 517 65.4
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-184 650.2 517 65.4
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 1.1e-183 647.1 525 64.2
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 1.1e-181 640.6 520 64.0
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 1.8e-181 639.8 514 63.0
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 1.9e-178 629.8 483 66.7
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 2.4e-178 629.4 454 70.3
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 1.3e-176 623.6 516 58.7
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 1.8e-176 623.2 520 61.3
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 3.9e-176 622.1 520 61.3
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 1.1e-175 620.5 496 66.1
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 1.6e-174 616.7 516 60.3
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 2.0e-172 609.8 514 61.5
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 4.5e-172 608.6 504 63.5
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 1.7e-171 606.7 524 62.0
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 2.9e-171 605.9 516 61.4
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 1.6e-169 600.1 514 60.7
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 2.7e-169 599.4 516 59.5
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 2.7e-169 599.4 516 57.4
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 1.8e-168 596.7 515 60.0
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 8.7e-168 594.3 511 58.9
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 7.4e-167 591.3 536 56.9
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 9.6e-167 590.9 511 60.1
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 6.9e-165 584.7 496 63.3
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 2.6e-164 582.8 495 60.0
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 2.6e-164 582.8 511 59.1
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 4.5e-164 582.0 495 60.2
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 7.6e-164 581.3 515 57.3
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 2.2e-163 579.7 536 59.1
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 2.9e-163 579.3 525 61.1
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 3.8e-163 578.9 510 58.4
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 5.0e-163 578.6 519 58.6
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 1.1e-162 577.4 513 57.5
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 5.5e-162 575.1 510 58.0
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 5.5e-162 575.1 512 58.4
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 3.5e-161 572.4 515 57.3
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 7.9e-161 571.2 515 56.7
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 6.7e-160 568.2 510 57.5
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 9.7e-159 564.3 517 57.1
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 2.8e-158 562.8 512 57.6
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 4.8e-158 562.0 521 56.8
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.4e-157 560.5 515 55.7
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 2.4e-157 559.7 517 56.9
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 9.0e-157 557.8 498 57.8
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 7.7e-156 554.7 516 54.5
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 1.3e-155 553.9 493 58.4
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 3.8e-155 552.4 519 55.3
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 8.5e-155 551.2 516 57.8
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 2.5e-154 549.7 510 55.9
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 2.5e-154 549.7 494 58.5
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 3.2e-154 549.3 518 55.4
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 3.2e-154 549.3 515 56.1
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 4.6e-153 545.4 513 56.7
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 4.6e-153 545.4 496 59.3
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 1.5e-151 540.4 514 54.3
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 2.2e-150 536.6 514 54.7
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 3.7e-150 535.8 513 54.4
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 6.3e-150 535.0 515 54.6
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 1.1e-149 534.3 516 55.0
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 1.1e-149 534.3 515 55.1
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 5.3e-149 531.9 530 54.3
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 2.0e-148 530.0 516 54.8
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 2.0e-148 530.0 518 55.6
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 1.3e-147 527.3 494 56.5
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 1.3e-147 527.3 496 56.0
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 1.7e-147 526.9 515 55.7
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 1.1e-146 524.2 493 56.2
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 2.5e-146 523.1 493 55.2
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 3.6e-145 519.2 496 56.0
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 4.7e-145 518.8 517 54.9
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 1.4e-144 517.3 515 52.8
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 3.9e-144 515.8 495 52.9
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 7.4e-143 511.5 505 56.4
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 9.7e-143 511.1 512 52.1
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 7.0e-141 505.0 494 54.9
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 1.3e-139 500.7 465 59.1
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 2.1e-137 493.4 495 54.3
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 6.1e-137 491.9 511 49.3
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 1.0e-136 491.1 514 52.1
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 2.3e-136 490.0 496 54.6
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 6.7e-136 488.4 504 52.2
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 8.2e-134 481.5 398 62.3
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 1.6e-132 477.2 521 52.6
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 2.9e-131 473.0 509 50.1
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 1.9e-130 470.3 512 51.8
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 1.2e-124 451.1 490 50.2
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 1.0e-123 448.0 342 64.3
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 1.1e-122 444.5 396 58.8
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 1.6e-113 414.1 523 44.7
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 7.0e-109 398.7 392 54.1
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 2.7e-100 370.2 335 56.1
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 4.3e-98 362.8 270 65.2
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 1.3e-94 351.3 327 59.6
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 4.7e-89 332.8 344 53.2
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 2.7e-76 290.4 198 69.2
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 2.7e-76 290.4 198 69.2
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 7.3e-74 282.3 219 63.5
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 1.0e-67 261.9 535 31.2
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 6.6e-67 259.2 532 33.5
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 1.4e-64 251.5 496 33.9
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 2.2e-62 244.2 215 55.3
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 3.0e-51 207.2 425 32.0
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 9.6e-50 202.2 195 60.0
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 9.7e-42 175.6 508 29.1
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 4.5e-39 166.8 174 58.0
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 3.1e-32 144.1 142 53.5
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 1.5e-31 141.7 172 42.4
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 1.5e-31 141.7 142 52.8
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 2.6e-31 141.0 116 62.9
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 6.5e-30 136.3 115 57.4
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 7.2e-29 132.9 115 55.7
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 8.0e-20 102.8 116 50.9
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 2.3e-19 101.3 117 42.7
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 1.5e-13 82.0 215 28.8
Actinidia33399 Actinidia chinensis HOM05D006455 ORTHO05D008098 2.2e-09 68.2 38 73.7


User provided reference genes

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